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Improving taxonomic accuracy for fungi in public sequence databases: applying 'one name one species' in well-defined genera with Trichoderma/Hypocrea as a test case

Barbara Robbertse, Pooja K Strope, Priscila Chaverri, Romina Gazis, Stacy Ciufo, Michael Domrachev, Conrad L Schoch
2017 Database: The Journal of Biological Databases and Curation  
Improving taxonomic accuracy for fungi in public sequence databases: applying 'one name one species' in well-defined genera with Trichoderma/Hypocrea as a test case.  ...  In this case study the recent taxonomic information was applied to do a complete taxonomic audit for the genus Trichoderma in the NCBI Taxonomy database.  ...  Acknowledgements We thank the input of experts in the Trichoderma community as well the work by members of the International Subcommission on Trichoderma and Hypocrea (ISTH) as part of the International  ... 
doi:10.1093/database/bax072 pmid:29220466 pmcid:PMC5641268 fatcat:t4oypzpx4nfatl3avfhn44u5ka

A novel polyphasic identification system for genus Trichoderma [article]

Kai Dou, Zhixiang Lu, Qiong Wu, Mi Ni, Chuanjin Yu, Meng Wang, Yaqian Li, Xinhua Wang, Huilan Xie, Jie Chen
2018 bioRxiv   pre-print
In most tested cases, three nucleotide markers and phenotypic characters showed improved identification performance.  ...  researchers as nematologist, chemists, nutritionist and the like, lacking of taxonomic knowledge of fungi.  ...  L. (2017) 535 Improving taxonomic accuracy for fungi in public sequence databases: applying 'one name one species' 536 in well-defined genera with Trichoderma/Hypocrea as a test case.  ... 
doi:10.1101/481382 fatcat:qjywhucrfbdhnmoiydcbktapd4

The Trichoderma brevicompactum clade: a separate lineage with new species, new peptaibiotics, and mycotoxins

Thomas Degenkolb, Ralf Dieckmann, Kristian Fog Nielsen, Tom Gräfenhan, Christoph Theis, Doustmorad Zafari, Priscila Chaverri, Adnan Ismaiel, Hans Brückner, Hans von Döhren, Ulf Thrane, Orlando Petrini (+1 others)
2008 Mycological progress  
The Brevicompactum clade is recognized as a separate lineage in Trichoderma/Hypocrea.  ...  With the exception of H. rodmanii, all members of this clade produce the simple trichothecene-type toxins harzianum A or trichodermin.  ...  In the current work, very small differences in characters such as rate of growth or length/width ratio of conidia are apomorphic for species and combine with metabolic characters in defining species.  ... 
doi:10.1007/s11557-008-0563-3 fatcat:ktqbznc2ivdenhxp566bk5fqf4