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Improvements of the UltraScan scientific gateway to enable computational jobs on large-scale and open-standards based cyberinfrastructures

Shahbaz Memon, Borries Demeler, Raminder Singh, Morris Riedel, Norbert Attig, Gary Gorbet, Lahiru Gunathilake, Morris Riedel, Thomas Lippert, Suresh Marru, Andrew Grimshaw, Florian Janetzko
2013 Proceedings of the Conference on Extreme Science and Engineering Discovery Environment Gateway to Discovery - XSEDE '13  
In this contribution, we will focus on several improvements of the UltraScan scientific gateway that enable a standardized job submission and management to computational resources while retaining its lightweight  ...  The aim is to provide evidence for the added value of open standards and resulting interoperability enabling not only UltraScan application submissions to resources offered in the US cyber infrastructure  ...  ACKNOWLEDGEMENTS This work in this paper is partially supported by the Extreme Science and Engineering Discovery (XSEDE) Project of the National Science Foundation (NSF) grant number OCI-1053575. 9.  ... 
doi:10.1145/2484762.2484800 dblp:conf/xsede/MemonAGGRLMGJDSR13 fatcat:6tloafhrljdq5a75yqwqrewsji

Apache Airavata: Design and Directions of a Science Gateway Framework

Marlon Pierce, Suresh Marru, Lahiru Gunathilake, Thejaka Amila Kanewala, Raminder Singh, Saminda Wijeratne, Chathuri Wimalasena, Chathura Herath, Eran Chinthaka, Chris Mattmann, Aleksander Slominski, Patanachai Tangchaisin
2014 2014 6th International Workshop on Science Gateways  
Gateways use Airavata to manage application and workflow executions on a range of backend resources (grids, computing clouds, and local clusters).  ...  We discuss how this works within Airavata and how it may be applicable to other distributed computing infrastructure and cyberinfrastructure efforts.  ...  We thank Eroma Abeysinghe for critical reading of the manuscript and the Apache Airavata Program Management Committee for contributions to the software architecture and implementation.  ... 
doi:10.1109/iwsg.2014.15 dblp:conf/iwsg/PierceMGKSWWHCMST14 fatcat:bmlvgzzdxfcsjppkmrzqvtqhbi

Apache airavata

Suresh Marru, Ross Gardler, Aleksander Slominski, Ate Douma, Srinath Perera, Sanjiva Weerawarana, Lahiru Gunathilake, Chathura Herath, Patanachai Tangchaisin, Marlon Pierce, Chris Mattmann, Raminder Singh (+2 others)
2011 Proceedings of the 2011 ACM workshop on Gateway computing environments - GCE '11  
This paper discusses the architecture of Airavata and its modules, and illustrates how the software can be used as individual components or as an integrated solution to build science gateways or generalpurpose  ...  Airavata builds on general concepts of serviceoriented computing, distributed messaging, and workflow composition and orchestration.  ...  ACKNOWLEDGMENTS This work is partially funded by the National Science Foundation through the award: OCI-1032742 (SDCI NMI Improvement: Open Gateway Computing Environments -Tools for Cyberinfrastructure-Enabled  ... 
doi:10.1145/2110486.2110490 dblp:conf/sc/MarruGHTPMSGCGSDPW11 fatcat:aumigogsh5gflc242vkm6fchni

Virtual laboratory for planetary materials (VLab)

Pedro R. C. da Silveira, M. Núñez Valdez, Renata M. Wenzcovitch, Marlon Pierce, Cesar R. S. da Silva, David A. Yuen
2011 Proceedings of the 2011 TeraGrid Conference on Extreme Digital Discovery - TG '11  
In this paper we review the main features and illustrate the use of VLab, a Science Gateway that provides Cyberinfrastructure (CI) for distributed first principles computations in materials science.  ...  We also explain VLab's approach to interactive user tools, including interactive image plots developed for thermodynamic properties, pressure scale calculator, and a database of results.  ...  ACKNOWLEDGMENTS This work is supported by grants NSF/ATM 0428774 and NSF/EAR 1047629.  ... 
doi:10.1145/2016741.2016777 fatcat:ykswhygbwzgpxi3jt2bvfetro4

Enabling scientific workflow and gateways using the standards-based XSEDE architecture

Shahbaz Memon, Morris Riedel, Helmut Neukirchen, Matthias Book, Andrew Grimshaw, Daniel Dougherty, Peter Kascuk, Marton Istvan, Akos Hajnal
2017 2017 International Conference on Information and Communication Technologies (ICICT)  
The contribution of this paper is to provide a concise explanation and concrete examples of how the EMS works, how it can be used to support scientific gateways and workflow engines, and how the XSEDE  ...  The XSEDE Execution Management Services (EMS) architecture is an instance of the Open Grid Services Architecture EMS and is used by higher level services such as gateways and workflow engines to provide  ...  Fig. 6 . 6 Integrated Architecture showing Scientific-area specific clients like the Ultrascan scientific gateway, the Apache Airavata API, and standards based middleware services being part of the XSEDE  ... 
doi:10.1109/icict.2017.8320171 fatcat:sdedvifhcjb6zb6iondpfxn7vq

A Workload Analysis of NSF's Innovative HPC Resources Using XDMoD [article]

Nikolay A. Simakov, Joseph P. White, Robert L. DeLeon, Steven M. Gallo, Matthew D. Jones, Jeffrey T. Palmer, Benjamin Plessinger, Thomas R. Furlani
2018 arXiv   pre-print
The workload analysis also sought to illustrate a wide variety of usage patterns and performance requirements for jobs running on these systems.  ...  for trends to understand the nature of how the broad portfolio of computational science research is being supported and how it is changing over time.  ...  To improve reporting by science gateways and facilitate the storing of job attributes in the XDCDB, the XSEDE Cyberinfrastructure Integration (XCI) and XDCDB teams developed the gateway-submit-attributes  ... 
arXiv:1801.04306v1 fatcat:opybj47hmvfvbphlkb6wvvfn3i

Summary of the First Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE1)

2014 Journal of Open Research Software  
To highlight some of these issues and share experiences, the First Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE1) was held in November 2013 in conjunction with the SC13  ...  Many scientists' research increasingly depends on the quality and availability of software upon which their works are built.  ...  Choi thanks Ian Foster, Director of the Computation Institute, University of Chicago, for encouraging her work in reliable reproducible research and supporting her trip to participate in the WSSSPE1 conference  ... 
doi:10.5334/jors.an fatcat:ojxr3pysjjcp5ekihzz2jbad7u

Pervasive Technology Institute Annual Report: Research Innovations and Advanced Cyberinfrastructure Services in Support of IU Strategic Goals During FY 2015

Craig Stewart, Beth Plale, Welch Geoffrey, C Fox, Matthew Link, Therese Miller, Eric Wernert, Michael Boyles, Ben Fulton, David Hancock, Robert Henschel, Scott Michael (+15 others)
unpublished
"Many scientific problems depend on the ability to analyze and compute large amounts of data, but this analysis often does not scale well," Fox said.  ...  Web services are hosted on Quarry gateway hosting resources and use Geode to host data. • UltraScan. The UltraScan science gateway (PI Dr.  ... 
fatcat:7j5oq7fblfhz7kvkay57hdzkjq