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Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community
2017
Database: The Journal of Biological Databases and Curation
Preserved Fulltext
Conflict of interest. None declared. ...
with Huanglongbing (HLB) or citrus greening disease. ...
One of the major decisions taken by the ACP community as a result of this annotation effort and subsequent detailed evaluation of the Diaci1.1 genome was to generate an improved reference genome for ACP ...
doi:10.1093/database/bax032
pmid:29220441
pmcid:PMC5502364
fatcat:fnu3upwfebep5hn2jmbira3yhq
Improved annotation of the insect vector of Citrus greening disease: Biocuration by a diverse genomics community
[article]
2017
bioRxiv
pre-print
Preserved Fulltext
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HLB threatens citrus production worldwide. Suppression or reduction of the insect vector using chemical insecticides has been the primary method to inhibit the spread of citrus greening disease. ...
The Asian citrus psyllid (Diaphorina citri Kuwayama) is the insect vector of the bacterium Candidatus Liberibacter asiaticus (CLas), the pathogen associated with citrus Huanglongbing (HLB, citrus greening ...
The Maker genome annotation (v2.31.8) pipeline was used for calculating AED (33,41). ...
doi:10.1101/099168
fatcat:ia2oyh7t6favtddlwqa3q4ydr4
Manual curation and phylogenetic analysis of chitinase family genes in the Asian citrus psyllid, Diaphorina citri
2022
Gigabyte
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The Asian citrus psyllid, Diaphorina citri, carries the bacterium causing Huanglongbing, or citrus greening disease, a devastating citrus disease. ...
We identified and annotated 12 chitinase family genes from D. citri as part of a community effort to create highquality gene models to aid the design of interdictory molecules for pest control. ...
Josh Benoit for assistance with visualization of expression data. ...
doi:10.46471/gigabyte.46
fatcat:jlhqpxbaqvhdrlj2inofac2quy
Abstracts from the 5th International Research Conference on Huanglongbing
2017
Journal of citrus pathology
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A community-driven genome annotation has also identified a number of misassemblies and missing genes in the current genome. ...
it vectors the devastating citrus greening bacterial disease. ...
Citrus greening or huanglongbing (HLB) disease is associated with an increase in pre-harvest fruit drop, for which the molecular mechanisms remain unknown. ...
doi:10.5070/c441034714
fatcat:ytjrcafo7zh25ap2ij2uy7zbeu
SolCyc: a database hub at the Sol Genomics Network (SGN) for the manual curation of metabolic networks in Solanum and Nicotiana specific databases
2018
Database: The Journal of Biological Databases and Curation
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., Bombarely, A., Battey, J.N.D. et al. SolCyc: a database hub at the Sol Genomics Network (SGN) for the manual curation of metabolic networks in Solanum and Nicotiana specific databases. ...
Abstract SolCyc is the entry portal to pathway/genome databases (PGDBs) for major species of the Solanaceae family hosted at the Sol Genomics Network. ...
Another example for host-pathogen interactions is the citrus greening disease threatening a large proportion of the citrus production worldwide. ...
doi:10.1093/database/bay035
pmid:29762652
pmcid:PMC5946812
fatcat:s3r3n6tqyrbjvm3iakvag5gjs4
By land, air, and sea: hemipteran diversity through the genomic lens
2018
Current Opinion in Insect Science
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Thanks to a recent spate of sequencing projects, the Hemiptera are the first hemimetabolous insect order to achieve a critical mass of species with sequenced genomes, establishing the basis for comparative ...
genomics of the bugs. ...
Acknowledgments We thank Stephen Richards (Baylor College of Medicine) on behalf of the i5K community for championing insect genomics through the i5K pilot sequencing project and for suggesting the topic ...
doi:10.1016/j.cois.2017.12.005
pmid:29602356
fatcat:wbqwymft3nbuhht6zxoqllvm2u
Development on Citrus medica infected with 'Candidatus Liberibacter asiaticus' has sex-specific and -nonspecific impacts on adult Diaphorina citri and its endosymbionts
2020
PLoS ONE
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Huanglongbing (HLB) is a deadly, incurable citrus disease putatively caused by the unculturable bacterium, 'Candidatus Liberibacter asiaticus' (CLas), and transmitted by Diaphorina citri. ...
Prior studies suggest D. citri transmits CLas in a circulative and propagative manner; however, the precise interactions necessary for CLas transmission remain unknown, and the impact of insect sex on ...
Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community. ...
doi:10.1371/journal.pone.0239771
pmid:33022020
fatcat:2e42h6t3fbagpksyvo7x7tp6lu
Endogenous viral element-derived piRNAs are not required for production of ping-pong-dependent piRNAs from Diaphorina citri densovirus
[article]
2020
bioRxiv
pre-print
Preserved Fulltext
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The file type is application/pdf.
Furthermore, a recombinant Cricket paralysis virus containing a portion of the DcDV genome corresponding to the DcDV-derived EVE was not targeted by vpiRNAs during infection in D. citri harboring the EVE ...
Here we describe a Diaphorina citri densovirus (DcDV)-derived EVE in the genome of Diaphorina citri. ...
Improved 873 annotation of the insect vector of citrus greening disease: biocuration by a diverse 874 genomics community. Database. 2017;2017:bax032. 875 30. Luo Y, Agnarsson I. ...
doi:10.1101/2020.05.20.105924
fatcat:6rhffekb75dkrch6d6r75s5kyu
Abstracts of Presentations Development of the Hydro-Solar Thermotherapy (HSTT) for treatment of HLB infected citrus
unpublished
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Diaphorina citri, spreads a plant-infecting bacterium linked to Citrus greening disease, a worldwide threat to citrus sustainability. ...
Bacteria transmission by the Asian citrus Psyllid, linking psyllid genomic/proteomic interactions is demonstrated. ...
A community-driven genome annotation has also identified a number of misassemblies and missing genes in the current genome. ...
fatcat:5bhevhbhznazfggqdhh6ikgmyi