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Implementation and performance of Munin

John B. Carter, John K. Bennett, Willy Zwaenepoel
1991 Proceedings of the thirteenth ACM symposium on Operating systems principles - SOSP '91  
We e v aluate its implementation and describe the execution of two Munin programs that achieve performance within ten percent of message passing implementations of the same programs.  ...  Munin achieves this level of performance with only minor annotations to the shared memory programs.  ...  Acknowledgements Dave Johnson provided important guidance during the prototype implementation and his feedback throughout the project was very useful.  ... 
doi:10.1145/121132.121159 dblp:conf/sosp/CarterBZ91 fatcat:znm6i7e7krc5tcrug3rjvzfw3u

Implementation and performance of Munin

John B. Carter, John K. Bennett, Willy Zwaenepoel
1991 ACM SIGOPS Operating Systems Review  
We e v aluate its implementation and describe the execution of two Munin programs that achieve performance within ten percent of message passing implementations of the same programs.  ...  Munin achieves this level of performance with only minor annotations to the shared memory programs.  ...  Acknowledgements Dave Johnson provided important guidance during the prototype implementation and his feedback throughout the project was very useful.  ... 
doi:10.1145/121133.121159 fatcat:nrfiwvg4lna2nb6773nrstvtpi

Distributed shared memory

J. K. Bennett, J. B. Carter, A. L. Cox, E. N. Elnozahy, D. B. Johnson, P. Keleher, W. Zwaenepoel
1992 Proceedings of the 5th workshop on ACM SIGOPS European workshop Models and paradigms for distributed systems structuring - EW 5  
Initial experience with a prototype implementation is very encouraging: the performance cost of Munin, compared to the underlying message passing system, appears to be small.  ...  The Munin implementation thus reduces both the number of messages and the latency, whereas in the DASH implementation the concern is solely with latency.  ... 
doi:10.1145/506378.506384 dblp:conf/sigopsE/BennettCCEJKZ92 fatcat:ijme4sxn6fhm7ocpjylu4pp65m

Peer reviewing – a responsibility and a power of the university?

Bård Smedsrød, Eirik Reierth, Lars Moksness, Leif Longva
2016 Septentrio Conference Series  
to decide on the extent and for what journal to perform peer reviewing.  ...  After all, work contracts include instructions on how to perform a certain amount of teaching, administration and research.  ...  and owned by the universities • Increased power to improve the standards and performance of peer reviewing.  ... 
doi:10.7557/5.3946 fatcat:4iblrjw5ynaxtef2j7e6fytz6a

Techniques for reducing consistency-related communication in distributed shared-memory systems

John B. Carter, John K. Bennett, Willy Zwaenepoel
1995 ACM Transactions on Computer Systems  
the Munin implementation using buffered update and with the conventional DSM system.  ...  Munin employs a queue-based implementation of locks sim- ilar to existing implementations on shared-memory multiprocessors.  ... 
doi:10.1145/210126.210127 fatcat:cadv2nk3u5dvxmbsa7l3pv6e5a

MUNIn—multiple-sample-unifying long-range chromatin Interaction detector: a statistical framework for identifying long-range chromatin interactions from multiple samples

Weifang Liu, Armen Abnousi, Qian Zhang, Naoki Kubo, Joshua S. Martin Beem, Yun Li, Ming Hu, Yuchen Yang
2021 Human Genetics and Genomics Advances  
To benchmark the performance of MUNIn, we performed comprehensive simulation studies and real data analysis and showed that MUNIn can achieve much lower false-positive rates for detecting sample-specific  ...  Our data demonstrated that MUNIn is a useful tool for the integrative analysis of interactomic data from multiple samples.  ...  Acknowledgements This research was supported by the National Institute of Health grants [R01 HL129132, U01 DA052713, R01 GM105785, and P50 HD103573].  ... 
doi:10.1016/j.xhgg.2021.100036 pmid:34485947 pmcid:PMC8415461 fatcat:ksja2d5dobhwnpniv3e75k6flu

Munin: distributed shared memory based on type-specific memory coherence

J. K. Bennett, J. B. Carter, W. Zwaenepoel
1990 SIGPLAN notices  
This paper focuses on the design and use of Munin's memory coherence mechanisms, and compares our approach t o p r e v i o u s w ork in this area. y In Norse mythology, Munin (Memory) was one of two r  ...  Each d a y, Munin would y across the world and bring back to Odin knowledge of man's memory. Thus, the raven Munin might be considered the world's rst distributed shared memory mechanism.  ...  Acknowledgements David Johnson provided a number of suggestions for improving the structure of the paper.  ... 
doi:10.1145/99164.99182 fatcat:gfb5o2zwhbcxjml574nfu25p3y

Munin: distributed shared memory based on type-specific memory coherence

J. K. Bennett, J. B. Carter, W. Zwaenepoel
1990 Proceedings of the second ACM SIGPLAN symposium on Principles & practice of parallel programming - PPOPP '90  
This paper focuses on the design and use of Munin's memory coherence mechanisms, and compares our approach t o p r e v i o u s w ork in this area. y In Norse mythology, Munin (Memory) was one of two r  ...  Each d a y, Munin would y across the world and bring back to Odin knowledge of man's memory. Thus, the raven Munin might be considered the world's rst distributed shared memory mechanism.  ...  Acknowledgements David Johnson provided a number of suggestions for improving the structure of the paper.  ... 
doi:10.1145/99163.99182 dblp:conf/ppopp/BennettCZ90 fatcat:5zifpt43afei5ol4uflb55ba2i

MUNIn (Multiple cell-type UNifying long-range chromatin Interaction detector): a statistical framework for identifying long-range chromatin interactions from multiple cell types [article]

Weifang Liu, Armen Abnousi, Qian Zhang, Yun Li, Ming Hu, Yuchen Yang
2020 bioRxiv   pre-print
To benchmark the performance of MUNIn, we performed comprehensive simulation studies and real data analysis, and showed that MUNIn can achieve much lower false positive rates for detecting cell-type-specific  ...  Our data demonstrated that MUNIn is a useful tool for the integrative analysis of interactomic data from multiple cell types.  ...  Acknowledgements This research was supported by the National Institute of Health grants [R01 HL129132, U01 DA052713, R01 GM105785, and P50 HD103573].  ... 
doi:10.1101/2020.11.12.380782 fatcat:mqsdfrljg5fonbxq624pckwnoa

Toward Large-Scale Shared Memory Multiprocessing [chapter]

John K. Bennett, John B. Carter, Willy Zwaenepoel
1992 Scalable Shared Memory Multiprocessors  
Implementation of Munin is in progress we are still designing Willow.  ...  Willow i s i n tended to be a true shared memory multiprocessor, providing memory capacity and performance capable of supporting over a thousand commercial microprocessors.  ...  ACKNOWLEDGEMENTS Other members of the Computer Systems Laboratory have participated in the development o f m a n y of the ideas that we h a ve presented.  ... 
doi:10.1007/978-1-4615-3604-8_15 fatcat:k7qiuyjnbzc5bkx4eenkrzmvxq

Distributed shared memory: a survey of issues and algorithms

B. Nitzberg, V. Lo
1991 Computer  
A Distributed sharedmemory systems implement the sharedmemory abstraction On multicomputer architectures, combining the scalability of networkbased architectures with the convenience Of shared-memory programming  ...  DIUS the large caDital and orga-and SPDL. Some industrv standards Oregon. Eugene. OR 97403: e-mail [last name]@cs.uoregon.edu.  ...  Acknowledgments This work was supported in part by NSF grant CCR-8808532, a Tektronix research fellowship, and the NSF Research Experiences for Undergraduates program.  ... 
doi:10.1109/2.84877 fatcat:cy664qqsdvetfbl6oill7bpk3u

Algorithms implementing distributed shared memory

M. Stumm, S. Zhou
1990 Computer  
on Principles and Practice of Parallel Programming, ACM, pp. 168-176, 1990.]Munin[Bennet et al, 1990] • Use MMU: place each shared object onto separate page.• Annotate declarations of shared variables  ...  Before a release is allowed to be performed, all previous reads and writes done by the process must have completed. 3.  ... 
doi:10.1109/2.53355 fatcat:th2exx5ffvc4dkmkcwxrxfcfqu

EU and Open Access: The OpenAIRE project

Jan Erik Frantsvåg
2014 Septentrio Conference Series  
EU and Open Access As all research and innovation builds on earlier achievements, an efficient system for broad dissemination of and access to research publications and raw data can accelerate scientific  ...  This in turn is essential for Europe's ability to innovate, to enhance its economic performance and improve its capacity to compete through knowledge on a global scale.  ...  a broader scientific debate and can trigger the interest of the wider public and of industry.  ... 
doi:10.7557/3019 fatcat:xro3g6iujfa37kh4iq5wdhguqq

A novel algorithm for scalable and accurate Bayesian network learning

Laura E Brown, Ioannis Tsamardinos, Constantin F Aliferis
2004 Studies in Health Technology and Informatics  
Given the emergence of datasets in medicine and biology with thousands of variables and that current algorithms do not scale more than a few hundred variables in practical domains, new efficient and accurate  ...  the data, (c) MMHC is computationally more efficient and scalable than SC, and (d) the generating networks are not required to be uniformly sparse nor is the user of MMHC required to guess correctly the  ...  Acknowledgements:The first author was supported by NLM grant T15 LM07450-01 and the second and third authors by NIH grants R01 LM007948-01 and P20 LM007613-01.  ... 
pmid:15360905 fatcat:mbrcwdyo7bgszpkfe5fyszeogy

MUNIN: a new approach to multi-dimensional NMR spectra interpretation

V Y Orekhov, I V Ibraghimov, M Billeter
2001 Journal of Biomolecular NMR  
Features of MUNIN include good resolution in crowded regions and the absence of assumptions about line shapes.  ...  The application of MUNIN is illustrated for a 1H-15N-NOESY-HSQC, where each component is defined as the set of all NOE peaks formed by a given amide group.  ...  Leckner for providing us with a uniformly 15 N-labelled sample of azurin and to M. Kubista for fruitful discussions.  ... 
pmid:11430755 fatcat:3dykqukgabfbhdtpzlh25chmui
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