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Imaging and visual analysis---Toward real-time image guided neurosurgery using distributed and grid computing

Nikos Chrisochoides, Andriy Fedorov, Andriy Kot, Neculai Archip, Peter Black, Olivier Clatz, Alexandra Golby, Ron Kikinis, Simon K. Warfield
2006 Proceedings of the 2006 ACM/IEEE conference on Supercomputing - SC '06  
Precision of the resection can be improved by utilizing Magnetic Resonance Imaging (MRI) as an aid in decision making during Image Guided Neurosurgery (IGNS).  ...  For the first time in clinical practice we demonstrated, that with the help of distributed computing non-rigid MRI registration based on volume tracking can be computed intra-operatively.  ...  This work was performed in part using computational facilities at the College of William and Mary which were enabled by grants from Sun Microsystems, the National Science Foundation, and Virginia's Commonwealth  ... 
doi:10.1145/1188455.1188536 dblp:conf/sc/ChrisochoidesFKABCGKW06 fatcat:axdihdbwb5eslpdr7kd6xuli2e

Toward Real-Time Image Guided Neurosurgery Using Distributed and Grid Computing

Nikos Chrisochoides, Andriy Fedorov, Andriy Kot, Neculai Archip, Peter Black, Olivier Clatz, Alexandra Golby, Ron Kikinis, Simon Warfield
2006 ACM/IEEE SC 2006 Conference (SC'06)  
For the first time in clinical practice we demonstrated, that with the help of distributed computing non-rigid MRI registration based on volume tracking can be computed intra-operatively. 1.  ...  High computational cost used to render these techniques inappropriate for clinical applications.  ...  This work was performed in part using computational facilities at the College of William and Mary which were enabled by grants from Sun Microsystems, the National Science Foundation, and Virginia's Commonwealth  ... 
doi:10.1109/sc.2006.65 fatcat:doqvfei32bdzxfe5jdzqmfp4v4

Author's index

2000 ACM/IEEE SC 2000 Conference (SC'00)  
Catholique de Louvain Real-Time Biomechanical Simulation of Volumetric Brain Deformation for Image Guided Neurosurgery Gannon, Dennis -NASA Ames Computing and Data Grids for Science and Engineering  ...  for Image Guided Neurosurgery Figueiredo, Renato J.  ... 
doi:10.1109/sc.2000.10057 fatcat:siz2mgpg3jhwbeos4ew7z3jmmq

Toward improved tumor targeting for image guided neurosurgery with intra-operative parametric search using distributed and grid computing

Andriy Fedorov, Nikos Chrisochoides
2008 Proceedings, International Parallel and Distributed Processing Symposium (IPDPS)  
We describe a high-performance distributed software environment for real-time nonrigid registration during Image-Guided Neurosurgery (IGNS).  ...  The implementation allows to perform volumetric non-rigid registration of MRI data within two minutes of computation time, and can enable large-scale parametric studies of the registration algorithm.  ...  Acknowledgments This work was performed in part using computational facilities at the College of William and Mary which were enabled by grants from Sun Microsystems, the National Science Foundation, and  ... 
doi:10.1109/ipdps.2008.4536428 dblp:conf/ipps/FedorovC08 fatcat:hgt2qblluzhdlmxunlxl4nfzci

From medical image computing to computer-aided intervention: development of a research interface for image-guided navigation

Xenophon Papademetris, Christine DeLorenzo, Sven Flossmann, Markus Neff, Kenneth P. Vives, Dennis D. Spencer, Lawrence H. Staib, James S. Duncan
2009 International Journal of Medical Robotics and Computer Assisted Surgery  
This interface enables bi-directional transfer of data such as images, visualizations and tool positions in real time.  ...  Results-We present examples from the successful use of this research interface in both phantom experiments and in real neurosurgeries.  ...  PI) and R01 EB006494 and R21EB007770 (Papademetris, X. PI).  ... 
doi:10.1002/rcs.241 pmid:19301361 pmcid:PMC2796181 fatcat:3vkuvqwrezd6hfkkpqvpqqplv4

Model-enhanced neuroimaging: clinical, research, and educational applications

W. L. Nowinski
2002 IMIA Yearbook of Medical Informatics  
Wang, and G. L. Yang.  ...  US systems vary in terms of the range of acoustic frequencies and energies, and beam divergence. Low cost and real-time scanning make US popular.  ...  The Talairach transformation can be performed in real time using hardware-assisted texture mapping [60] or in near real-time when implemented optimally [58] , [61] .  ... 
doi:10.1055/s-0038-1638137 fatcat:qmhv3kdtuzc5tjssbalxp373mi

Author Index

2008 2008 IEEE International Symposium on Parallel and Distributed Processing  
Optimizing the Data Distribution Layer of BOINC with BitTorrent Fedorov, Andriy Toward Improved Tumor Targeting for Image Guided Neurosurgery with Intraoperative Parametric Search using Distributed and  ...  Improving Predictions for Water Spills Using DDDAS Towards a Real-Time Data Driven Wildland Fire Model Downes, Patrick A Distributed Simulation Framework for Conformal Radiotherapy Dragicevic, Kristijan  ... 
doi:10.1109/ipdps.2008.4536576 fatcat:7unikf5ywjhjtdd6xtrmcom3gq

funcLAB/G—service-oriented architecture for standards-based analysis of functional magnetic resonance imaging in HealthGrids

Stephan G. Erberich, Manasee Bhandekar, Ann Chervenak, Carl Kesselman, Marvin D. Nelson
2007 NeuroImage  
Further we would like to acknowledge the MR technologists of the Childerns Hospital of Los Angeles, University of Southern California, and the MR technologists and Radiologists of the Thousand Oaks Radiology  ...  Acknowledgments We would like to acknowledge the kind support by the Resonance Technology Incorporation, Northridge, California, for providing their VisuStim fMRI stimulation equipment to develop and test  ...  Real-time application, e.g. intra-operative surgery planning and image guided intervention drawing from prior large scale images, require specialized real-time programming and high-bandwidth, low-latency  ... 
doi:10.1016/j.neuroimage.2007.07.001 pmid:17707204 fatcat:tssvu7gqrveirjdkbq4s2ic2ay

Grid-enabling medical image analysis

C. Germain, V. Breton, P. Clarysse, Y. Gaudeau, T. Glatard, E. Jeannot, Y. Legre, C. Loomis, J. Montagnat, J.-M. Moureaux, A. Osorio, X. Pennec (+1 others)
2005 CCGrid 2005. IEEE International Symposium on Cluster Computing and the Grid, 2005.  
Grids have emerged as a promising technology to handle the data and compute intensive requirements of many application areas.  ...  Digital medical image processing is a promising application area for grids.  ...  The method is: • to combine the expertise from medical and computer science teams (specialized in clinical applications, medical image analysis algorithms and IT systems, grid and distributed systems)  ... 
doi:10.1109/ccgrid.2005.1558593 dblp:conf/ccgrid/GermainBCGGJLLMMOPT05 fatcat:qzmpszc4rbgxrikmpng5ajqlfi

Towards a 3D modeling of brain tumors by using endoneurosonography and neural networks

Andrés Serna, Flavio Prieto
2017 Revista Ingenierías Universidad de Medellín  
In neurosurgery, recent trends suggest the combined use of endoscopy and ultrasound (endoneurosonography or ENS) for 3D virtualization of brain structures in real time.  ...  The use of self-organizing maps (SOM) and neural gas networks (NGN) is particularly studied.  ...  This technique is called endoneurosonography (ENS) and is for real-time visualization of brain structures such as tumors.  ... 
doi:10.22395/rium.v16n30a7 fatcat:67glqbo72fcxznkk7sjkybwhve

Grid-enabling medical image analysis

C. Germain, V. Breton, P. Clarysse, Y. Gaudeau, T. Glatard, E. Jeannot, Y Legré, C. Loomis, I. Magnin, J. Montagnat, J. -M. Moureaux, A. Osorio (+2 others)
2005 Journal of clinical monitoring and computing  
The method is: • to confront the expertise of medical and computer science teams (specialized in clinical applications, medical image analysis algorithms and IT systems, grid and distributed systems) on  ...  Interactive image analysis is potentially a major beneficiary of the high-performance computation available on a Grid.  ... 
doi:10.1007/s10877-005-0679-9 pmid:16328948 fatcat:7enurzsg6bgcrgx54eg7btzoiq

Computational Modeling for Enhancing Soft Tissue Image Guided Surgery: An Application in Neurosurgery

Michael I. Miga
2015 Annals of Biomedical Engineering  
One area of considerable development has been directed towards correcting soft tissue deformation within image guided neurosurgery applications.  ...  This review captures the efforts that have been undertaken towards enhancing neuronavigation by the integration of soft tissue biomechanical models, imaging and sensing technologies, and algorithmic developments  ...  Acknowledgments This work is supported in part by the National Institutes of Health to include the National Institute for Neurological Disorders and Stroke under Grant R01-NS049251, and R21-NS087796, and  ... 
doi:10.1007/s10439-015-1433-1 pmid:26354118 pmcid:PMC4772964 fatcat:aeisthxt3ng2niw362jjzqmpnu

Biomechanical modeling and computer simulation of the brain during neurosurgery [article]

K. Miller, G. R. Joldes, G. Bourantas, S. K. Warfield, D. E. Hyde, R. Kikinis, A. Wittek
2019 arXiv   pre-print
Computational biomechanics of the brain for neurosurgery is an emerging area of research recently gaining in importance and practical applications.  ...  We discuss finite element and meshless domain discretization, the use of the Total Lagrangian formulation of continuum mechanics, and explicit time integration for solving both time-accurate and steady  ...  Acknowledgements The funding from the Australian Government through the Australian Research Council ARC (Discovery Project Grants DP160100714, DP1092893, and DP120100402) and National Health and Medical  ... 
arXiv:1904.01192v1 fatcat:w6l3a6mimjejdo4m5xjdw7lhw4

Capturing intraoperative deformations: research experience at Brigham and Women's hospital

Simon K. Warfield, Steven J. Haker, Ion-Florin Talos, Corey A. Kemper, Neil Weisenfeld, Andrea U.J. Mewes, Daniel Goldberg-Zimring, Kelly H. Zou, Carl-Fredrik Westin, William M. Wells, Clare M.C. Tempany, Alexandra Golby (+3 others)
2005 Medical Image Analysis  
images and to prepare updated fused visualizations of preoperative and intraoperative images at a rate compatible with surgical decision making.  ...  intraoperative imaging techniques to enhance visualization.  ...  Acknowledgements This investigation was supported in part by NIH Grants R21 MH67054, R01 LM007861, P41 RR13218, P01 CA67165, R01 AG19513 and R33 CA99015 and by a research grant from CIMIT.  ... 
doi:10.1016/j.media.2004.11.005 pmid:15721230 fatcat:mahu4a6za5gz5lpg3sr2crzkfq

2014 Index IEEE Transactions on Visualization and Computer Graphics Vol. 20

2015 IEEE Transactions on Visualization and Computer Graphics  
., +, TVCG June 2014 866-879 Model Estimation and Selection towardsUnconstrained Real-Time Tracking and Mapping.  ...  ., +, TVCG June 2014 839-851 Model Estimation and Selection towardsUnconstrained Real-Time Tracking and Mapping.  ... 
doi:10.1109/tvcg.2014.2368193 fatcat:nm3sijdvbza5nmxyina4rqinnu
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