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Four-dimensional radiotherapy planning for DMLC-based respiratory motion tracking

Paul J. Keall, Sarang Joshi, S. Sastry Vedam, Jeffrey V. Siebers, Vijaykumar R. Kini, Radhe Mohan
<span title="2005-03-16">2005</span> <i title="Wiley"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/4xxxfsh2pjc4nhsa3qijpqv6zy" style="color: black;">Medical Physics (Lancaster)</a> </i> &nbsp;
The dose distribution from each respiratory phase CT image set was mapped back to the peak-inhale CT image set for analysis.  ...  to CT scan length limitations͒ plus a penumbral margin at each respiratory phase.  ...  To create the final combined 4D plan, the dose for each constituent respiratory phase was summed via deformable image registration.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1118/1.1879152">doi:10.1118/1.1879152</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/15895577">pmid:15895577</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/dtweu2yvhzejtofrphko3yw6em">fatcat:dtweu2yvhzejtofrphko3yw6em</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170809141802/http://sydney.edu.au/medicine/radiation-physics/publications/images/PMID15214541.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/f0/36/f0365b03a3dd36de5d6cfdc690b8be82ac557d3c.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1118/1.1879152"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

Margins Matter: current radiation therapy practice and future directions

Catriona Hargrave, Tanya Holt
<span title="">2017</span> <i title="Wiley"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/fw2ywuzsnjgdjjf32njqlkyjya" style="color: black;">Journal of Medical Radiation Sciences</a> </i> &nbsp;
IGRT has facilitated the reduction in PTV and PRV margins as fractional variation in the TV and OARs is able to be corrected for via pre-treatment imaging, which was not possible when the alignment of  ...  Lin et al 2 used van Herk's formula to calculate margins based on setup errors derived from registration of structures proximal to the nasopharyngeal region, as well as margins derived from the registration  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1002/jmrs.233">doi:10.1002/jmrs.233</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/28573710">pmid:28573710</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC5454321/">pmcid:PMC5454321</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/rkkap5bdzfeizdeeb4davf3l4u">fatcat:rkkap5bdzfeizdeeb4davf3l4u</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200211084527/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC5454321&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/db/91/db9119dce5ccb24108224678168f248598277e00.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1002/jmrs.233"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> wiley.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5454321" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Online dosimetric evaluation of larynx SBRT: A pilot study to assess the necessity of adaptive replanning

Weihua Mao, Timothy Rozario, Weiguo Lu, Xuejun Gu, Yulong Yan, Xun Jia, Baran Sumer, David L Schwartz
<span title="2016-12-22">2016</span> <i title="Wiley (John Wiley &amp; Sons)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/tb6ytx3735fnnhyqltxc6yayym" style="color: black;">Journal of Applied Clinical Medical Physics</a> </i> &nbsp;
Simulation CT images and target volumes were deformably registered to daily volumetric images, the original SBRT plan was copied to the deformed images and contours, delivered dose distributions were re-calculated  ...  In-house software was developed to propagate the delivered dose distribution back to reference CT images using the deformation information exported from the treatment planning system.  ...  (a)-(c) axial, coronal, and sagittal views of reference dose distribution on simulation CT images; (d)-(f) rigid image registration results; (g)-(i) deformable image registration results; (j)-(l) dose  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1002/acm2.12019">doi:10.1002/acm2.12019</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/28291932">pmid:28291932</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC5689891/">pmcid:PMC5689891</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/ljfedxashrfprbvsn67nt6i5ga">fatcat:ljfedxashrfprbvsn67nt6i5ga</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200209155709/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC5689891&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/84/74/847483d9c6965d07156d1f54401a39370630fdc8.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1002/acm2.12019"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> wiley.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5689891" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Deformable image registration and interobserver variation in contour propagation for radiation therapy planning

Adam C. Riegel, Jeffrey G. Antone, Honglai Zhang, Prachi Jain, Jagdeep Raince, Anthony Rea, Angelo M. Bergamo, Ajay Kapur, Louis Potters
<span title="">2016</span> <i title="Wiley"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/tb6ytx3735fnnhyqltxc6yayym" style="color: black;">Journal of Applied Clinical Medical Physics</a> </i> &nbsp;
Deformable image registration (DIR) and interobserver variation inevitably introduce uncertainty into the treatment planning process.  ...  The purpose of the current work was to measure deformable image registration (DIR) errors and interobserver variability for regions of interest (ROIs) in the head and neck and pelvic regions.  ...  Combined interobserver variation and deformable image registration uncertainty may exceed conventional planning margins.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1120/jacmp.v17i3.6110">doi:10.1120/jacmp.v17i3.6110</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/27167289">pmid:27167289</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC5690939/">pmcid:PMC5690939</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/o5fojsmsmvad3n6wft72ew36le">fatcat:o5fojsmsmvad3n6wft72ew36le</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20160521234626/http://jacmp.org:80/index.php/jacmp/article/viewFile/6110/pdf_564" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/96/a8/96a8bbb759cb2fa6430f57d86727928d7c57c909.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1120/jacmp.v17i3.6110"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5690939" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Optimal parameter selection for intensity-based multi-sensor data registration

E. G. Parmehr, C. S. Fraser, C. Zhang, J. Leach
<span title="2014-08-07">2014</span> <i title="Copernicus GmbH"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/yhzu63ehjfe2dbswnsdfm5vlba" style="color: black;">ISPRS Annals of the Photogrammetry, Remote Sensing and Spatial Information Sciences</a> </i> &nbsp;
The proposed method determines the best parameters for PDF estimation via an analysis of the relationship between similarity measure values of the data and the adopted geometric transformation in order  ...  to achieve the optimal registration reliability.  ...  In order to adapt NCMI for registration of optical images and LiDAR data, both datasets need to be represented in the same data structure.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.5194/isprsannals-ii-3-95-2014">doi:10.5194/isprsannals-ii-3-95-2014</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/z3gscnzqgbag3b4umjf3e6pmoi">fatcat:z3gscnzqgbag3b4umjf3e6pmoi</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170705123125/http://www.isprs-ann-photogramm-remote-sens-spatial-inf-sci.net/II-3/95/2014/isprsannals-II-3-95-2014.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/31/89/3189d6867d6a9aa6dd6103b28f2115d856a49cd2.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.5194/isprsannals-ii-3-95-2014"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> Publisher / doi.org </button> </a>

A simplified method of four-dimensional dose accumulation using the mean patient density representation

Carri K. Glide-Hurst, Geoffrey D. Hugo, Jian Liang, Di Yan
<span title="2008-11-06">2008</span> <i title="Wiley"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/4xxxfsh2pjc4nhsa3qijpqv6zy" style="color: black;">Medical Physics (Lancaster)</a> </i> &nbsp;
Four lung cancer cases were also evaluated for stereotactic body radiotherapy and conformal treatments; however, deformable image registration of the 4DCTs was used to generate the displacement vector  ...  4D dose calculations in clinical practice, particularly for adaptive planning purposes.  ...  CONCLUSION We have demonstrated the feasibility of approximating the subject's density distribution via an AVG-CT and utilizing deformable registration for cumulative dose calculation.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1118/1.3002304">doi:10.1118/1.3002304</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/19175086">pmid:19175086</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC2673609/">pmcid:PMC2673609</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/aoc5jggbg5fftnexnfbj33jaru">fatcat:aoc5jggbg5fftnexnfbj33jaru</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200501033653/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC2673609&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/5a/34/5a3407f5cc6c96960f8eeabe3da34968647ae3b5.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1118/1.3002304"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2673609" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Accumulating daily-varied dose distributions of prostate radiation therapy with soft-tissue-based kV CT guidance

Andrew Godley, Ergun Ahunbay, Cheng Peng, X. Allen Li
<span title="">2012</span> <i title="Wiley"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/tb6ytx3735fnnhyqltxc6yayym" style="color: black;">Journal of Applied Clinical Medical Physics</a> </i> &nbsp;
Even with daily image guidance based on soft tissue registration, deviations of fractional doses can be quite large due to changes in patient anatomy.  ...  The less than 3% difference between delivered and planned prostate coverage indicates that the PTV margin of 5 mm was sufficient with the soft-tissue-based kV CT guidance for the cases studied.  ...  The interfractional anatomic changes, such as those observed in prostate radiotherapy, require the cumulative dose over a fractionated delivery be calculated via deformable image registration.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1120/jacmp.v13i3.3859">doi:10.1120/jacmp.v13i3.3859</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/22584178">pmid:22584178</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC5716564/">pmcid:PMC5716564</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/7tpkipe5xvcfln5rwfnzkxwmxu">fatcat:7tpkipe5xvcfln5rwfnzkxwmxu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190301234251/http://pdfs.semanticscholar.org/9a84/b76c21c3777d0c5669afc707a8274e677c9d.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/9a/84/9a84b76c21c3777d0c5669afc707a8274e677c9d.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1120/jacmp.v13i3.3859"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5716564" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

α-Information-Based Registration of Dynamic Scans for Magnetic Resonance Cystography

Hao Han, Qin Lin, Lihong Li, Chaijie Duan, Hongbing Lu, Haifang Li, Zengmin Yan, John Fitzgerald, Zhengrong Liang
<span title="">2016</span> <i title="Institute of Electrical and Electronics Engineers (IEEE)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/q2z26obphvchndqieqd65vltle" style="color: black;">IEEE journal of biomedical and health informatics</a> </i> &nbsp;
for either mono-modality or multi-modality image registration.  ...  The registration method is developed on the similarity measure of α-information, which has the potential of achieving higher registration accuracy than the commonly-used mutual information (MI) measure  ...  moving, marginal reference, and gradient of the joint distribution, respectively.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/jbhi.2015.2441744">doi:10.1109/jbhi.2015.2441744</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/26087506">pmid:26087506</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC4683121/">pmcid:PMC4683121</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/ecadr6twlrhfhe6jfn7v3q5mvm">fatcat:ecadr6twlrhfhe6jfn7v3q5mvm</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200428020900/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC4683121&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/0d/01/0d017bf545e25148e7c37726ad79aaa1232cb730.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/jbhi.2015.2441744"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> ieee.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4683121" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Uncertainty-Driven Efficiently-Sampled Sparse Graphical Models for Concurrent Tumor Segmentation and Atlas Registration

Sarah Parisot, William Wells, Stephane Chemouny, Hugues Duffau, Nikos Paragios
<span title="">2013</span> <i title="IEEE"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/753trptklbb4nj6jquqadzwwdu" style="color: black;">2013 IEEE International Conference on Computer Vision</a> </i> &nbsp;
To this end we estimate the segmentation and registration marginals towards adaptive graph resolution and intelligent definition of the search space.  ...  In this paper we introduce a novel approach for combined segmentation/registration of brain tumors that adapts graph and sampling resolution according to the image content.  ...  In the task of image registration, we aim at finding a transformation T that will map the source image to the target image: V (x) = A(T (x))) (1) The presence of the tumor renders the registration more  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/iccv.2013.85">doi:10.1109/iccv.2013.85</a> <a target="_blank" rel="external noopener" href="https://dblp.org/rec/conf/iccv/ParisotWCDP13.html">dblp:conf/iccv/ParisotWCDP13</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/labdogbn5vbulbwbtoue35bb54">fatcat:labdogbn5vbulbwbtoue35bb54</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170924031208/https://hal.inria.fr/hal-00858696/document" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/01/8c/018cfae0038a3b00abb4bbfb7e3d5f5c39a2678b.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/iccv.2013.85"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> ieee.com </button> </a>

Concurrent tumor segmentation and registration with uncertainty-based sparse non-uniform graphs

Sarah Parisot, William Wells, Stéphane Chemouny, Hugues Duffau, Nikos Paragios
<span title="">2014</span> <i title="Elsevier BV"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/kpkfymbkufcnzjfc5ydyokby4y" style="color: black;">Medical Image Analysis</a> </i> &nbsp;
uncertainties recovered by the min marginal energies.  ...  Both segmentation and registration problems are modeled using a unified pairwise discrete Markov Random Field model on a sparse grid superimposed to the image domain.  ...  (a) Target image, (b) individual framework, (c) Joint framework, high resolution, (d) Joint framework, with adaptive sampling. Visual Registration results, BRATS dataset.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.media.2014.02.006">doi:10.1016/j.media.2014.02.006</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/24717540">pmid:24717540</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC4068266/">pmcid:PMC4068266</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/upmcpwusunglzouyl5542i45sa">fatcat:upmcpwusunglzouyl5542i45sa</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20151107212851/https://hal.inria.fr/hal-01109692/file/MedIA-V2.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/7b/15/7b1547efbdf7b9fcd8bddb65e297185eef13d021.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.media.2014.02.006"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> elsevier.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4068266" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Evaluation of an Open Source Registration Package for Automatic Contour Propagation in Online Adaptive Intensity-Modulated Proton Therapy of Prostate Cancer

Yuchuan Qiao, Thyrza Jagt, Mischa Hoogeman, Boudewijn P. F. Lelieveldt, Marius Staring
<span title="2019-11-27">2019</span> <i title="Frontiers Media SA"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/mefn5t5kjndavkrqau5bzfpaoe" style="color: black;">Frontiers in Oncology</a> </i> &nbsp;
Objective: Our goal was to investigate the performance of an open source deformable image registration package, elastix, for fast and robust contour propagation in the context of online-adaptive intensity-modulated  ...  Results: Contour propagation runtime varied between 3 and 30 s for different registration settings.  ...  However, the time cost of image registration is also important for online adaptive IMPT (7, 10, 11) .  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3389/fonc.2019.01297">doi:10.3389/fonc.2019.01297</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/31828037">pmid:31828037</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC6890846/">pmcid:PMC6890846</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/psrvnd7ugjfflmyya5sgewhu5m">fatcat:psrvnd7ugjfflmyya5sgewhu5m</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200506222012/https://repository.tudelft.nl/islandora/object/uuid%3A57c661e5-6788-43a8-9d30-c13d42eab14b/datastream/OBJ/download" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/9c/ec/9cec94e7e154a3208496bbfa7246b3a2625ed198.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3389/fonc.2019.01297"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> frontiersin.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6890846" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Real-time diagnosis and visualization of tumor margins in excised breast specimens using fluorescence lifetime imaging and machine learning

Jakob Unger, Christoph Hebisch, Jennifer E. Phipps, João L. Lagarto, Hanna Kim, Morgan A. Darrow, Richard J. Bold, Laura Marcu
<span title="2020-02-14">2020</span> <i title="The Optical Society"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/fxa4hwkh5vf4nejqcsg3pblm5u" style="color: black;">Biomedical Optics Express</a> </i> &nbsp;
Thus, advanced imaging tools are needed to ensure clear margins at the time of surgery.  ...  The supervised training was based on a previously developed registration technique between autofluorescence imaging data and cross-sectional histology slides.  ...  The supervised training pipeline involves registration of cross-sectional histology with the video image using a hybrid registration method [23] .  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1364/boe.381358">doi:10.1364/boe.381358</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/32206404">pmid:32206404</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC7075618/">pmcid:PMC7075618</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/azzljfp5kvcp5mgcrphioa3x5e">fatcat:azzljfp5kvcp5mgcrphioa3x5e</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200505073942/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC7075618&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/d9/75/d975f56eed0486d206e23f270e8df40397eb2cb1.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1364/boe.381358"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7075618" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Comparison of User-Directed and Automatic Mapping of the Planned Isocenter to Treatment Space for Prostate IGRT

Zijie Xu, Ronald Chen, Andrew Wang, Andrea Kress, Mark Foskey, An Qin, Timothy Cullip, Gregg Tracton, Sha Chang, Joel Tepper, Di Yan, Edward Chaney
<span title="">2013</span> <i title="Hindawi Limited"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/a5p2e7p4xfg23hvv3wca3cde5u" style="color: black;">International Journal of Biomedical Imaging</a> </i> &nbsp;
This mapping involves rigid and/or nonrigid registration of planning (pCT) and intratreatment (tCT) CT images.  ...  Image-guided radiotherapy (IGRT), adaptive radiotherapy (ART), and online reoptimization rely on accurate mapping of the radiation beam isocenter(s) from planning to treatment space.  ...  If true, this finding would not be surprising since the boost margin (3 mm) would be expected to be more sensitive to image registration errors.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1155/2013/892152">doi:10.1155/2013/892152</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/24348526">pmid:24348526</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC3857747/">pmcid:PMC3857747</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/eqegxdie5nekvfckbso2zfuyye">fatcat:eqegxdie5nekvfckbso2zfuyye</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180725181114/http://downloads.hindawi.com/journals/ijbi/2013/892152.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/47/cb/47cb3edeb5a0d3062bd87d3abdef3fd3ec634412.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1155/2013/892152"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> hindawi.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3857747" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Delivered dose quantification in prostate radiotherapy using online 3D cine imaging and treatment log files on a combined 1.5T magnetic resonance imaging and linear accelerator system

Charis Kontaxis, Daan M. de Muinck Keizer, Linda G.W. Kerkmeijer, Thomas Willigenburg, Mariska D. den Hartogh, Jochem R.N. van der Voort van Zyp, Eline N. de Groot-van Breugel, Jochem Hes, Bas W. Raaymakers, Jan J.W. Lagendijk, Hans C.J. de Boer
<span title="2020-07-13">2020</span> <i title="Elsevier BV"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/4awjfxmq7fb5jimbgmdx2tqmsi" style="color: black;">Physics and Imaging in Radiation Oncology</a> </i> &nbsp;
Such a pipeline is essential for online adaptation especially as we progress to MRI-guided extremely hypofractionated treatments.  ...  The planned and delivered dose distributions were compared among all patients for a total of 100 fractions.  ...  In order to have a more accurate and complete view of the actual delivered dose, 3D deformable registration should instead be used to track the VOI across the complete field-of-view via 3D Deformation  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.phro.2020.06.005">doi:10.1016/j.phro.2020.06.005</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/33458322">pmid:33458322</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC7807644/">pmcid:PMC7807644</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/jcg5cb352rav7c27qes2drpldy">fatcat:jcg5cb352rav7c27qes2drpldy</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210526115220/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC7807644&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/4b/a3/4ba3123a246b7dd9a946b3ab6f8c899424190c46.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.phro.2020.06.005"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> elsevier.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7807644" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Segmenting lung tumors on longitudinal imaging studies via a patient-specific adaptive convolutional neural network

Chuang Wang, Neelam Tyagi, Andreas Rimner, Yu-Chi Hu, Harini Veeraraghavan, Guang Li, Margie Hunt, Gig Mageras, Pengpeng Zhang
<span title="2018-12-31">2019</span> <i title="Elsevier BV"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/tp6msqxeyjdxpo4i4ouy6t32w4" style="color: black;">Radiotherapy and Oncology</a> </i> &nbsp;
To design a deep learning algorithm that automatically delineates lung tumors seen on weekly magnetic resonance imaging (MRI) scans acquired during radiotherapy and facilitates the analysis of geometric  ...  This margin accounts for registration errors, respiratory uncertainties, and tumor growth among certain patients.  ...  The segmentation via deformable registration was compared to the ground truth and served as a clinical benchmark.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.radonc.2018.10.037">doi:10.1016/j.radonc.2018.10.037</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/30773175">pmid:30773175</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC6615045/">pmcid:PMC6615045</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/ji7yh27iejbwteechfivmplmiu">fatcat:ji7yh27iejbwteechfivmplmiu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200428191148/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC6615045&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/ea/58/ea5894b80127d169018b1a1b4ec8861990f9b406.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.radonc.2018.10.037"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> elsevier.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6615045" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>
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