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Iam hiQ-a novel pair of accuracy indices for imputed genotypes

Albert Rosenberger, Viola Tozzi, Heike Bickeböller, INTEGRAL-ILCCO consortium
2022
In the present paper, we introduce Iam hiQ, an independent pair of accuracy measures that can be applied to dosage files, the output of all imputation software.  ...  We recommend using Iam hiQ additional to other accuracy scores for variant filtering before stepping into the analysis of imputed GWAS data.  ...  , Faculty of Medicine, University of Oviedo, Oviedo, Spain. 14 Clalit National Cancer Control Center at Carmel Medical Center and Technion Faculty of Medicine, Haifa, Israel. 15 Roy Castle Lung Cancer  ... 
doi:10.1186/s12859-022-04568-3 pmid:35073846 pmcid:PMC8785528 fatcat:lwa2qi2erfamhawnow4q4cqwwi