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ISYS: a decentralized, component-based approach to the integration of heterogeneous bioinformatics resources
2001
Bioinformatics
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Motivation: Heterogeneity of databases and software resources continues to hamper the integration of biological information. ...
Results: We present a component-based approach that relies on a generalized platform for component integration. ...
use cases, to Harry Mangalam for critical reading of the manuscript, and to Stephen Joseph and the NCGR for funding and general support. ...
doi:10.1093/bioinformatics/17.1.83
pmid:11222265
fatcat:yiqxnsvsazh3zeksbvxttfk2di
An integration platform for heterogeneous bioinformatics software components
2001
IBM Systems Journal
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In this paper, we describe an approach to the problem of integration of heterogeneous bioinformatics resources that relies on a generalized software platform, written in the Java TM language, that we call ...
The problem of integrating heterogeneous software is of immense importance to the field, especially because a rapid pace of change and a general scarcity of development resources discourage re-engineering ...
to make the project possible; and to the National Center for Genome Resources for funding and support. ...
doi:10.1147/sj.402.0570
fatcat:nxtwkjfzfnburjvihwgqtfjrzy
Dynamic integration of biological data sources using the data concierge
2013
Health Information Science and Systems
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Methods: To address this challenge, in this paper we propose a new semantics-based adaptive middleware, the Data Concierge, which is able to dynamically integrate heterogeneous biological data sources ...
The ever-changing landscape of large-scale network environments and innovative biology technologies require dynamic mechanisms to rapidly integrate previously unknown bioinformatics sources at runtime. ...
The author also would like to express his gratitude to the Department of PET and Nuclear Medicine, RPA hospital for the supports and research facilities. ...
doi:10.1186/2047-2501-1-7
pmid:25825659
pmcid:PMC4340781
fatcat:wbzigvv3wfaghb4hkpkkyzxqda
Artificial Intelligence Enabled Wireless Networking for 5G and Beyond: Recent Advances and Future Challenges
[article]
2020
arXiv
pre-print
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of data that need to be dealt with in B5G. ...
We first provide a comprehensive survey of recent advances and future challenges that result from bringing AI/ML technologies into B5G wireless networks. ...
From Model-based to Data-driven Optimization of UDNs The current approach to the management and optimization of cellular networks is based on "models". ...
arXiv:2001.08159v1
fatcat:r4dx7v72e5devg3f5e5kchvnpq
Plug-and-play macroscopes
2011
Communications of the ACM
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Interactive Science Map of NIH Funding Herr II, Bruce W., Talley, Edmund M, Burns, Gully APC, Newman, David & La Rowe, Gavin. (2009 ...
TEXTrend (http://www.textrend.org) lead by George Kampis, Eötvös University, Hungary develops a framework for the easy and flexible integration, configuration, and extension of p y g , g , plugin-based ...
It helps pool resources, supports interoperability, but also eases the migration from research code to production code and hence the transfer of the migration from research code to production code and ...
doi:10.1145/1897852.1897871
fatcat:5cj4axgbgzfpha7c2kn4ehvfhu
Reliable and Scalable SARS-CoV-2 qPCR Testing at a High Sample Throughput: Lessons Learned from the Belgian Initiative
2022
Life
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, high-volume, high-confidence workflow based on heterogeneous instrumentation and diverse assays, assay components, and protocols. ...
Under auspices of a federal government Task Force responsible for upscaling the country's testing capacity, we were able to set up a national testing initiative with readily available resources, putting ...
Nathalie Devos, Benjamin Hengchen, Pierre Wattiau, and Sibylle Mehauden are employees of the GSK group of companies. The authors declare no further conflict of interest. ...
doi:10.3390/life12020159
pmid:35207446
pmcid:PMC8879918
fatcat:li3fff3zjrga7jyfblj5fkp7mu
An extensible automated protein annotation tool: standardizing input and output using validated XML
2005
Bioinformatics
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With this in mind, XML DTDs have been designed to store the input and output of any server. Plug-in wrappers to a number of services have been written which are called from a master script. ...
Motivation: There is a frequent need to apply a large range of local or remote prediction and annotation tools to one or more sequences. ...
Other attempts to integrate heterogeneous resources include ISYS and Biopipe. ISYS (Siepel et al., 2001 ) uses a decentralized, component-based approach with a design similar to CORBA and SOAP/WSDL. ...
doi:10.1093/bioinformatics/bti808
pmid:16339285
fatcat:nc2vza4j7bf2tmepkm3eueg4j4
A survey of the first 20 years of research on semantic Web and linked data
2018
Ingénierie des Systèmes d'Information
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This paper is a survey of the research topics in the field of Semantic Web, Linked Data and Web of Data. ...
Compiling several bibliographical sources and bibliometric indicators, we identify the main research trends and we reference some of their major publications to provide an overview of that initial period ...
Acknowledgements To Mylène Leitzelman for her independent bibliometric validation of the topics and articles. ...
doi:10.3166/isi.23.3-4.11-38
fatcat:zsuc34fo5fh3tbz56rlrf72rii
From social simulation to integrative system design
2011
The European Physical Journal Special Topics
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The Centers belonging to this network of Integrative Systems Design Centers would be focused on a particular field, but they would be part of an attempt to eventually cover all relevant areas of society ...
effects for a number of model variants, and determine the reliability of their implications (given the validity of the underlying models). ...
This approach would facilitate the integration of different kinds of data (e.g. demographic, socio-economic, and geographic data) and different kinds of simulation approaches (e.g. agent-based and continuous ...
doi:10.1140/epjst/e2011-01402-7
fatcat:zolchmuenzeglh2c2keblytdjy
Page 570 of IBM Systems Journal Vol. 40, Issue 2
[page]
IBM Systems Journal
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In this paper, we describe an approach to the problem of integration of heterogeneous bioinformatics resources that relies on a generalized software platform, written in the Java™ language, that we call ...
The problem of integrating heterogeneous software is of immense importance to the field, especially because a rapid pace of change and
a general scarcity of development resources discourage re-engineering ...
Sponsors and Supporters
2015
2015 IEEE/ACM 7th International Workshop on Modeling in Software Engineering
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Acknowledgements We would like to thank the anonymous reviewer who suggested integrating the ideas of Rogers [6] into the paper.
Acknowledgements The author would like to thank Mr. ...
Fan Yan for the helpfulness to English grammar. A special thank to Dr. Dong Yuan at Department of Computer Science and Technology, Tsinghua University for exchanging the viewpoints. ...
In a world in which a distributed system is made of tens of heterogeneous components, and expert programmers often work for months to install and configure a distributed application, a new approach is ...
doi:10.1109/mise.2015.7
fatcat:vroz3iskmbg4xp7kmxdm74wcjy
Sponsors and Supporters
2015
2015 IEEE/ACM 4th International Workshop on Realizing Artificial Intelligence Synergies in Software Engineering
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Acknowledgements We would like to thank the anonymous reviewer who suggested integrating the ideas of Rogers [6] into the paper.
Acknowledgements The author would like to thank Mr. ...
Fan Yan for the helpfulness to English grammar. A special thank to Dr. Dong Yuan at Department of Computer Science and Technology, Tsinghua University for exchanging the viewpoints. ...
In a world in which a distributed system is made of tens of heterogeneous components, and expert programmers often work for months to install and configure a distributed application, a new approach is ...
doi:10.1109/raise.2015.7
fatcat:l3ie5zayxjgs7oiv7eklxvjsvm
Sponsors and supporters
2015
2015 IEEE/ACM 7th International Workshop on Principles of Engineering Service-Oriented and Cloud Systems
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Acknowledgements We would like to thank the anonymous reviewer who suggested integrating the ideas of Rogers [6] into the paper.
Acknowledgements The author would like to thank Mr. ...
Fan Yan for the helpfulness to English grammar. A special thank to Dr. Dong Yuan at Department of Computer Science and Technology, Tsinghua University for exchanging the viewpoints. ...
In a world in which a distributed system is made of tens of heterogeneous components, and expert programmers often work for months to install and configure a distributed application, a new approach is ...
doi:10.1109/pesos.2015.7
fatcat:vgtzzfevlrd6fla2434a5te27y
Sponsors and Supporters
2015
2015 IEEE 28th Conference on Software Engineering Education and Training
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Acknowledgements We would like to thank the anonymous reviewer who suggested integrating the ideas of Rogers [6] into the paper.
Acknowledgements The author would like to thank Mr. ...
Fan Yan for the helpfulness to English grammar. A special thank to Dr. Dong Yuan at Department of Computer Science and Technology, Tsinghua University for exchanging the viewpoints. ...
In a world in which a distributed system is made of tens of heterogeneous components, and expert programmers often work for months to install and configure a distributed application, a new approach is ...
doi:10.1109/cseet.2015.6
fatcat:thqwoz5mivcuhg73hmergrtl7y
Sponsors and Supporters
2015
2015 IEEE/ACM 5th International Workshop on the Twin Peaks of Requirements and Architecture
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Acknowledgements We would like to thank the anonymous reviewer who suggested integrating the ideas of Rogers [6] into the paper.
Acknowledgements The author would like to thank Mr. ...
Fan Yan for the helpfulness to English grammar. A special thank to Dr. Dong Yuan at Department of Computer Science and Technology, Tsinghua University for exchanging the viewpoints. ...
In a world in which a distributed system is made of tens of heterogeneous components, and expert programmers often work for months to install and configure a distributed application, a new approach is ...
doi:10.1109/twinpeaks.2015.7
fatcat:rnnzjpz5hzbyhj2m4xmrlxnpya
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