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IMGT, the international ImMunoGeneTics database

M. Ruiz
2000 Nucleic Acids Research  
IMGT, the international ImMunoGeneTics database (http://imgt.cines.fr:8104 ), is a high-quality integrated database specialising in Immunoglobulins (Ig), T cell Receptors (TcR) and Major Histocompatibility  ...  The IMGT server provides a common access to expertized genomic, proteomic, structural and polymorphic data of Ig and TcR molecules of all vertebrates.  ...  IMGT is a unique immunogenetics database for the genome, proteome, structure and polymorphism data of Ig, TcR and HLA.  ... 
doi:10.1093/nar/28.1.219 pmid:10592230 pmcid:PMC102442 fatcat:v5oeir47tvhbzlklsmpdroce64

IMGT, the international ImMunoGeneTics database

M.-P. Lefranc
2001 Nucleic Acids Research  
IMGT provides researchers and clinicians with a common access to all nucleotide, protein, genetic and structural immunogenetics data.  ...  IMGT, the international ImMunoGeneTics database, freely available at http://imgt.cines.fr:8104, was created in 1989 at and is a high quality integrated information system specialising in immunoglobulins  ...  ACKNOWLEDGEMENTS I am deeply grateful to the IMGT team for its expertise and motivation.  ... 
doi:10.1093/nar/29.1.207 pmid:11125093 pmcid:PMC29797 fatcat:kxd4biblbvc4hfgpcznoiw5iue

IMGT, the International ImMunoGeneTics database

M. Lefranc
1998 Nucleic Acids Research  
IMGT, the international ImMunoGeneTics database, is an integrated database specialising in Immunoglobulins (Ig), T cell Receptors (TcR) and Major Histocompatibility Complex (MHC) of all vertebrate species  ...  , and to provide a graphical user friendly data access.  ...  ACCESS AND CONTACT Figure 1 . 1 The IMGT international ImMunoGeneTics database WWW home page.  ... 
doi:10.1093/nar/26.1.297 pmid:9399859 pmcid:PMC147225 fatcat:sanf6oroyver7a254e7kzhqhcu

IMGT, the international ImMunoGeneTics database

V. Giudicelli, D. Chaume, J. Bodmer, W. Muller, C. Busin, S. Marsh, R. Bontrop, L. Marc, A. Malik, M.-P. Lefranc
1997 Nucleic Acids Research  
IMGT, the international ImMunoGeneTics database, is an integrated database specializing in immunoglobulins, T-cell receptors (TcR) and major histocompatibility complex (MHC) of all vertebrate species,  ...  to provide a graphical user-friendly data access.  ...  ACKNOWLEDGMENTS We thank Gérard Mennessier for the development of LIGMotif.  ... 
doi:10.1093/nar/25.1.206 pmid:9016537 pmcid:PMC146384 fatcat:loqrrrsbzfbpdjqaoi2bkecjxm

IMGT, the international ImMunoGeneTics database

M.-P. Lefranc, V. Giudicelli, C. Ginestoux, J. Bodmer, W. Muller, R. Bontrop, M. Lemaitre, A. Malik, V. Barbie, D. Chaume
1999 Nucleic Acids Research  
IMGT, the international ImMunoGeneTics database (http://imgt.cnusc.fr:8104 ), is a high-quality integrated database specialising in Immunoglobulins (Ig), T cell Receptors (TcR) and Major Histocompatibility  ...  IMGT comprises three databases: LIGM-DB, a comprehensive database of Ig and TcR, MHC/HLA-DB, and PRIMER-DB (the last two in development); a tool, IMGT/DNAPLOT, developed for sequence analysis and alignments  ...  INTRODUCTION The international ImMunoGeneTics (IMGT) database (1), created in 1989 by Marie-Paule Lefranc (Université Montpellier II, CNRS, Montpellier, France; lefranc@ligm.igh.cnrs.fr), is a high quality  ... 
doi:10.1093/nar/27.1.209 pmid:9847182 pmcid:PMC148137 fatcat:ffwpswb5pvbs3o5abgquic2xre

IMGT, the international ImMunoGeneTics information system(R)

M.-P. Lefranc
2004 Nucleic Acids Research  
The international ImMunoGeneTics information system â (IMGT) (http://imgt.cines.fr), created in 1989, by the Laboratoire d'ImmunoGé né tique Molé culaire LIGM (Université Montpellier II and CNRS) at Montpellier  ...  IMGT data are expertly annotated according to the rules of the IMGT Scientific chart, based on the IMGT-ONTOLOGY concepts.  ...  IMGT is the international reference for immunogenetics and immunoinformatics and provides a common access to all standardized data that include nucleotide and protein sequences, oligonucleotide primers  ... 
doi:10.1093/nar/gki065 pmid:15608269 pmcid:PMC540019 fatcat:7bh7zpn4lna43ehvgy5avusgvu

IMGT, the international ImMunoGeneTics database: a high-quality information system for comparative immunogenetics and immunology

Marie-Paule Lefranc
2002 Developmental and Comparative Immunology  
Overview of the IMGT information system (IMGT, the international ImMunoGeneTics database, http://imgt.cines.fr).  ...  IMGT, the international ImMunoGeneTics database (http://imgt.cines.fr), is a high quality integrated information system specializing in Immunoglobulins (IG), T cell Receptors (TR) and Major Histocompatibility  ...  I am deeply grateful to the IMGT team for its expertise and constant motivation.  ... 
doi:10.1016/s0145-305x(02)00026-5 pmid:12206833 fatcat:ko5uic5fbbeoliu76o7l6clani

IMGT, the international ImMunoGeneTics information system: a standardized approach for immunogenetics and immunoinformatics

Marie-Paule Lefranc
2005 Immunome Research  
IMGT provides a common access to standardized data from genome, genetics, proteome and three-dimensional structures.  ...  The accuracy and the consistency of IMGT data are based on IMGT-ONTOLOGY, a semantic specification of terms to be used in immunogenetics and immunoinformatics.  ...  The design of IMGT-Choreography and the creation of dynamic interactions between the IMGT databases and tools, using the Web services and IMGT-ML, represent novel and major developments of IMGT, the international  ... 
doi:10.1186/1745-7580-1-3 pmid:16305737 pmcid:PMC1312312 fatcat:6hkqzcde6bcvjgvgeosbpel2k4

IMGT/HLA Database--a sequence database for the human major histocompatibility complex

J. Robinson
2001 Nucleic Acids Research  
The HLA database provides a model which will be extended to provide specialist databases for polymorphic MHC genes of other species.  ...  The online IMGT/HLA submission tool allows both new and confirmatory sequences to be submitted directly to the WHO Nomenclature Committee.  ...  Initial support for the IMGT/HLA Database project was from the Imperial Cancer Research Fund and an EU Biotech grant (BIO4CT960037).  ... 
doi:10.1093/nar/29.1.210 pmid:11125094 pmcid:PMC29780 fatcat:kyzv3dmrxfbdhhifsjswhqf6m4

IMGT/LIGM-DB, the IMGT(R) comprehensive database of immunoglobulin and T cell receptor nucleotide sequences

V. Giudicelli
2006 Nucleic Acids Research  
For a given entry, nine types of display are available including the IMGT flat file, the translation of the coding regions and the analysis by the IMGT/V-QUEST tool.  ...  It was created in 1989 by LIGM, Montpellier, France and is the oldest and the largest database of IMGT Õ .  ...  IMGT Ò was funded by the European Union's BIOMED2, BIOTECH, 5th PCRDT programme (QLG2-2000-01287). IMGT Ò has obtained the Plate-forme RIO label since 2001. IMGT Ò is a CNRS trademark.  ... 
doi:10.1093/nar/gkj088 pmid:16381979 pmcid:PMC1347451 fatcat:t3ete7g72rcmtncupigehq7cea

IMGT-ONTOLOGY and IMGT databases, tools and Web resources for immunogenetics and immunoinformatics

Marie-Paule Lefranc
2004 Molecular Immunology  
The international ImMunoGeneTics information system ® (IMGT; http://imgt.cines.fr), is a high quality integrated information system specialized in immunoglobulins (IG), T cell receptors (TR), major histocompatibility  ...  IMGT provides a common access to standardized data which include nucleotide and protein sequences, oligonucleotide primers, gene maps, genetic polymorphisms, specificities, 2D and 3D structures.  ...  Acknowledgements I am deeply grateful to the IMGT team for its hard work, expertise, constant motivation and enthusiasm.  ... 
doi:10.1016/j.molimm.2003.09.006 pmid:14644091 fatcat:3pcslonq4zawjnygo5skyiixpu

IMGT/LIGM-DB: a systematized approach for ImMunoGeneTics database coherence and data distribution improvement

V Giudicelli, D Chaume, M P Lefranc
1998 Proceedings. International Conference on Intelligent Systems for Molecular Biology  
IMGT, the international ImMunoGeneTics database (http:(/)/imgt.cnusc.fr:8104), created by Marie-Paule Lefranc, Montpellier, France, is an integrated database specializing in antigen receptors and MHC of  ...  We developed a systematized approach and defined LIGM-DB systems which manage and realize the major tasks for the database survey.  ...  Acknowledgments We thank Chantal Busin (LIGM) for the IMGT WWW interface design, ValŽrie BarbiŽ (EUROGENTEC) for the development of IMGT/PRIMER-DB, GŽraldine Folch, Nathalie Pallar•s, Manuel Ruiz and Dominique  ... 
pmid:9783210 fatcat:2wchtsf2wndqto63trn26hwltq

The IPD and IMGT/HLA database: allele variant databases

James Robinson, Jason A. Halliwell, James D. Hayhurst, Paul Flicek, Peter Parham, Steven G. E. Marsh
2014 Nucleic Acids Research  
IPD consists of five core databases, with the IMGT/HLA Database as the primary database.  ...  The Immuno Polymorphism Database (IPD) was developed to provide a centralized system for the study of polymorphism in genes of the immune system.  ...  The authors would like to thank Angie Dahl of the Be The Match Foundation, for her work in securing on going funding for the database.  ... 
doi:10.1093/nar/gku1161 pmid:25414341 pmcid:PMC4383959 fatcat:3iez7iqgerdqdbozb6nyxlipze

IMGT® databases, web resources and tools for immunoglobulin and T cell receptor sequence analysis, http://imgt.cines.fr

M-P Lefranc
2003 Leukemia  
IMGT, the international ImMunoGeneTics database  (http://imgt.cines.fr), is a high-quality integrated information system specializing in immunoglobulins (IG), T cell receptors (TR) and major histocompatibility  ...  IMGT provides a common access to standardized data which include nucleotide and protein sequences, oligonucleotide primers, gene maps, genetic polymorphisms, specificities, 2D and 3D structures.  ...  I am deeply grateful to the IMGT team for its expertise and constant motivation.  ... 
doi:10.1038/sj.leu.2402637 pmid:12529691 fatcat:5ox3ssah5vgofeoimrjedjqgeu

Antibody Informatics: IMGT, the International ImMunoGeneTics Information System [chapter]

Antibodies for Infectious Diseases  
Antibody informatics is based on a unique ontology, IMGT-ONTOLOGY, created in 1989 by IMGT, the international ImMunoGeneTics information system (http://www.imgt.org).  ...  IMGT-ONTOLOGY defined, for the first time, the concept of 'genes' for the IG and the T cell receptors (TR), which led to their gene and allele nomenclature and allowed their entry in databases and tools  ...  IMGT, the international ImMunoGeneTics information system (http://www.imgt.org) (3) , was created in 1989 at Montpellier, France (CNRS and Université Montpellier 2) to standardize the immunogenetics data  ... 
doi:10.1128/microbiolspec.aid-0001-2012 pmid:26105823 fatcat:jmppvskftvh3dctgokrisk2kyi
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