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RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy

Stephen K Burley, Helen M Berman, Charmi Bhikadiya, Chunxiao Bi, Li Chen, Luigi Di Costanzo, Cole Christie, Ken Dalenberg, Jose M Duarte, Shuchismita Dutta, Zukang Feng, Sutapa Ghosh (+28 others)
<span title="2018-10-24">2018</span> <i title="Oxford University Press (OUP)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/hfp6p6inqbdexbsu4r7usndpte" style="color: black;">Nucleic Acids Research</a> </i> &nbsp;
The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB, rcsb.org), the US data center for the global PDB archive, serves thousands of Data Depositors in the Americas and Oceania and makes 3D macromolecular structure data available at no charge and without usage restrictions to more than 1 million rcsb.org Users worldwide and 600 000 pdb101.rcsb.org education-focused Users around the globe. PDB Data Depositors include structural biologists using macromolecular
more &raquo; ... llography, nuclear magnetic resonance spectroscopy and 3D electron microscopy. PDB Data Consumers include researchers, educators and students studying Fundamental Biology, Biomedicine, Biotechnology and Energy. Recent reorganization of RCSB PDB activities into four integrated, interdependent services is described in detail, together with tools and resources added over the past 2 years to RCSB PDB web portals in support of a 'Structural View of Biology.'
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/nar/gky1004">doi:10.1093/nar/gky1004</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/30357411">pmid:30357411</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC6324064/">pmcid:PMC6324064</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/clctmqo6ujaifm7s27vk3s2h7i">fatcat:clctmqo6ujaifm7s27vk3s2h7i</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190308003629/http://pdfs.semanticscholar.org/e963/84772807f391a7a62001631b3ec8730491e8.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/e9/63/e96384772807f391a7a62001631b3ec8730491e8.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/nar/gky1004"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> oup.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6324064" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences

Stephen K Burley, Charmi Bhikadiya, Chunxiao Bi, Sebastian Bittrich, Li Chen, Gregg V Crichlow, Cole H Christie, Kenneth Dalenberg, Luigi Di Costanzo, Jose M Duarte, Shuchismita Dutta, Zukang Feng (+26 others)
<span title="2020-11-19">2020</span> <i title="Oxford University Press (OUP)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/hfp6p6inqbdexbsu4r7usndpte" style="color: black;">Nucleic Acids Research</a> </i> &nbsp;
The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB), the US data center for the global PDB archive and a founding member of the Worldwide Protein Data Bank partnership, serves tens of thousands of data depositors in the Americas and Oceania and makes 3D macromolecular structure data available at no charge and without restrictions to millions of RCSB.org users around the world, including &gt;660 000 educators, students and members of the curious public using
more &raquo; ... 01.RCSB.org. PDB data depositors include structural biologists using macromolecular crystallography, nuclear magnetic resonance spectroscopy, 3D electron microscopy and micro-electron diffraction. PDB data consumers accessing our web portals include researchers, educators and students studying fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences. During the past 2 years, the research-focused RCSB PDB web portal (RCSB.org) has undergone a complete redesign, enabling improved searching with full Boolean operator logic and more facile access to PDB data integrated with &gt;40 external biodata resources. New features and resources are described in detail using examples that showcase recently released structures of SARS-CoV-2 proteins and host cell proteins relevant to understanding and addressing the COVID-19 global pandemic.
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/nar/gkaa1038">doi:10.1093/nar/gkaa1038</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/33211854">pmid:33211854</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC7779003/">pmcid:PMC7779003</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/dkqo54quqjgovp7y4v67b635zu">fatcat:dkqo54quqjgovp7y4v67b635zu</a> </span>
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Page 143 of Genetics Vol. 77, Issue SUPPLEMENT [page]

<span title="">1974</span> <i title="Genetics Society of America"> <a target="_blank" rel="noopener" href="https://archive.org/details/pub_genetics" style="color: black;">Genetics </a> </i> &nbsp;
., Savanah, Georgia 31404 NAMKOONG, Gene—Dept. Genet., Gardner Hall, N.C. St. Univ., Raleigh, N. Carolina 27607 NANCE, Walter E.—4146 N.  ...  Singapore, Bukit Timah Rd., Singapore, 10, Singapore NGUYEN, Bay Van—145 Ancona Ave., San Antonio, Texas 78212 NICHOLS, Warren W. = Inst. for Medical Research, Copewood St., Camden, N.J. 08103 NICKLA, Harry—Dept  ... 
<span class="external-identifiers"> </span>
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Page 46 of Genetics Vol. 74, Issue SUPPLEMENT [page]

<span title="">1973</span> <i title="Genetics Society of America"> <a target="_blank" rel="noopener" href="https://archive.org/details/pub_genetics" style="color: black;">Genetics </a> </i> &nbsp;
., Higashisendacho, I-1, Hiroshima City, Japan NAMKOONG, Gene—Dept. Genet., Gardner Hall, N.C. St. Univ., Raleigh, N. Carolina 27607 NANCE, Walter E.—4146 N.  ...  Calif., Davis, Calif. 95616 NICHOLS, Warren W. = Inst. for Medical Research, Copewood St., Camden, N.J. 08103 NICKLA, Harry—Dept. of Biology, Creighton Univ., Omaha, Nebr. 68131 NICKLAS, Robert Bruce -  ... 
<span class="external-identifiers"> </span>
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Page 149 of Genetics Vol. 80, Issue SUPPLEMENT [page]

<span title="">1975</span> <i title="Genetics Society of America"> <a target="_blank" rel="noopener" href="https://archive.org/details/pub_genetics" style="color: black;">Genetics </a> </i> &nbsp;
., Savanah, Georgia 31404 NAMKOONG, Gene—Dept. Genet., Gardner Hall, N.C. St. Univ., Raleigh, N. Carolina 27607 NANCE, Walter E.—4146 N.  ...  Hilgard Ave., Los Angeles, Calif. 90024 NICHOLS, Warren W. - Inst. for Medical Research, Copewood St., Camden, N.J. 08103 NICKLA, Harry—Dept. of Biology, Creighton Univ., Omaha, Nebr. 68131 NICKLAS, Robert  ... 
<span class="external-identifiers"> </span>
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Page 69 of Genetics Vol. 83, Issue SUPPLEMENT [page]

<span title="">1976</span> <i title="Genetics Society of America"> <a target="_blank" rel="noopener" href="https://archive.org/details/pub_genetics" style="color: black;">Genetics </a> </i> &nbsp;
., Savanah, Georgia 31404 NAMKOONG, Gene—Dept. Genet., Gardner Hall, N.C. St. Univ., Raleigh, N.  ...  Hilgard Ave., Los Angeles, Calif. 90024 NICHOLS, Warren W. - Inst. for Medical Research, Copewood St., Camden, N.J. 08103 NICKLA, Harry—Dept. of Biology, Creighton Univ., Omaha, Nebr. 68131 NICKLAS, Robert  ... 
<span class="external-identifiers"> </span>
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Page 397 of Diabetes Metabolism Research and Reviews Vol. 10, Issue 4 [page]

<span title="">1994</span> <i title="Wiley Subscription Services, Inc."> <a target="_blank" rel="noopener" href="https://archive.org/details/pub_diabetes-metabolism-research-and-reviews" style="color: black;">Diabetes Metabolism Research and Reviews</a> </i> &nbsp;
Harris MI, Hadden WC, Knowler WC, and Bennett PH: Prevalence of diabetes and impaired glucose tolerance and plasma glucose levels in the U.S. population aged 20-74 years.  ...  In Proceedings of the 2nd International Conference on Quantitative Genetics, Weir BS, Eisen EJ, Goodman MM, and Namkoong G, Eds. Sinauer, Sunderland, MA, 1988, pp. 341-352. 16.  ... 
<span class="external-identifiers"> </span>
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Page 116 of American Rocket Society. ARS Journal Vol. 28, Issue 8 [page]

<span title="">1958</span> <i title="American Institute of Aeronautics"> <a target="_blank" rel="noopener" href="https://archive.org/details/pub_american-rocket-society-ars-journal" style="color: black;">American Rocket Society. ARS Journal </a> </i> &nbsp;
Harris Hill Rd., Buffalo 21, N. Y. (LR, SP) NE NE NE NE NE! NE} NEt NEl NEI NEL NEY NEV  ...  NAMKOONG, DAVID, JR., (m) Tech. Engr., FPLD, General Electric Co., Evendale, O. Home: 9759 Northfield Lane, Cincinnati 31, O. (PC, SP) NANCE, JULIAN, (a) McDonnell Aircraft Corp., Robertson, Mo.  ... 
<span class="external-identifiers"> </span>
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Genealogical Relationship among Members of Selection and Production Populations of Yellow Cedar (Callitropsis nootkatensis [D. Don] Oerst.) in the Absence of Parental Information

N. Massah, J. Wang, J. H. Russell, A. Van Niejenhuis, Y. A. El-Kassaby
<span title="2009-11-27">2009</span> <i title="Oxford University Press (OUP)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/kd2t7ecy6bffjndxlqugmyurky" style="color: black;">Journal of Heredity</a> </i> &nbsp;
(Harris 1990 ) and the location of the 3 studied populations.  ...  1987; Namkoong and Bishir 1987; Savolainen et al. 1992; Williams and Savolainen 1996; Williams et al. 1999) .  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/jhered/esp102">doi:10.1093/jhered/esp102</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/19945992">pmid:19945992</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/nei5lbylczg5tjavolw5usuryu">fatcat:nei5lbylczg5tjavolw5usuryu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180730172209/https://watermark.silverchair.com/esp102.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAacwggGjBgkqhkiG9w0BBwagggGUMIIBkAIBADCCAYkGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQMeEmb9HPHm5Mfjn12AgEQgIIBWngjwbSNfihny49cNy0XyL6igcB0LzKVpm4-eKnyMG9rYGD8r1YFqJ-CoQU38GZVHu9NcXRG3MuQfywvBxo9Wd4lhFZ8kWoIH7gtBs9TjSVLcr_UbAvnXeo5ZnBO3t5158H1N6taba7UEMJ57WN4OzfHkfz2ZJ7vxKANJ0MOvcapotq0B80dxrorbQOZdiBu0yJ1QgF_vQWYP4J6rPiTSij1eaSkSKSrqIw19QKbe4WNL_mrC0WB3cIQ7vzVmuJvCym2IZFLPcje4IreJiPM4sitAjLudqmW5sAgjt1Zy2WH_CdsHsX6sQDWOHyO_fDQW5_2XWomevrst8z8Zf8P5ghRhfpkXixSXbaLQjcTRVlfVIH2eXBuxUzG62-hWtoOW8Jkm2IG7C4hcGBvMrzUgQ38EXX7q_gC1oy_cXz3UtGfUNfMFm9UrYRrgoa0pxhmaWDyf9a1xIWPgFI" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/ae/5b/ae5bbeb864f0c3b1370a6cdc33bde68da52a8301.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/jhered/esp102"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> oup.com </button> </a>

Offline Social Relationships and Online Cancer Communication: Effects of Social and Family Support on Online Social Network Building

Kang Namkoong, Dhavan V. Shah, David H. Gustafson
<span title="2016-11-08">2016</span> <i title="Informa UK Limited"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/cbxorwjz4jgufo2gyv5a7lhoeq" style="color: black;">Health Communication</a> </i> &nbsp;
Family is a fundamental source of social support and the roles of family members are more pronounced in providing essential and indispensable social support in a health crisis (Harris, et al., 2009) .  ...  Not surprisingly, cancer patients often indicate that family is the most frequent and primary source of support (Harris et al., 2009 ) and, therefore, the socio-environmental characteristics of familyhave  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1080/10410236.2016.1230808">doi:10.1080/10410236.2016.1230808</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/27824257">pmid:27824257</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC6095462/">pmcid:PMC6095462</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/5xp2wc27jjdmfceitiwq3lgtwu">fatcat:5xp2wc27jjdmfceitiwq3lgtwu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200307172159/https://uknowledge.uky.edu/cgi/viewcontent.cgi?article=1005&amp;context=cld_facpub" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/d1/de/d1dedbce2ecb9fe685147f1faaca57b625aa2ca1.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1080/10410236.2016.1230808"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> tandfonline.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6095462" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Chronotypes, night shifts and intensive care

Andrew C. Argent, Julie Benbenishty, Hans Flaatten
<span title="2015-03-03">2015</span> <i title="Springer Nature"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/stroy7w6k5d2thzdysv6ul3bwe" style="color: black;">Intensive Care Medicine</a> </i> &nbsp;
Thun E, Bjorvatn B, Flo E, Harris A, Pallesen S (2014) Sleep, circadian rhythms, and athletic performance. Sleep Med Rev 23:1-9 9.  ...  Park CI, An SK, Kim HW, Koh MJ, Namkoong K, Kang JI, Kim SJ (2015) Relationships between chronotypes and affective temperaments in healthy young adults. J Affect Disord 175:256-259 13.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1007/s00134-015-3711-7">doi:10.1007/s00134-015-3711-7</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/25731637">pmid:25731637</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/jppot4wnurgb3n4bggfbphnire">fatcat:jppot4wnurgb3n4bggfbphnire</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180728210942/https://link.springer.com/content/pdf/10.1007%2Fs00134-015-3711-7.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/75/9e/759ee2c6decc88f053be850da45b8c81299e9697.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1007/s00134-015-3711-7"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> springer.com </button> </a>

Page 200 of Cancer Science Vol. 96, Issue 3 [page]

<span title="">2005</span> <i title="John Wiley &amp; Sons, Inc."> <a target="_blank" rel="noopener" href="https://archive.org/details/pub_cancer-science" style="color: black;">Cancer Science</a> </i> &nbsp;
Yoon JH, Lee JM, Namkoong SE, Kim JH, Kim CK, Lee YJ, Kim YW, Ahn WS. cDNA Microarray analysis of gene expression profiles associate with cervical cancer. Cancer Res Treat 2003; 35: 451-9.  ...  Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, Harris MA, Hill DP, Issel-Tarver L, Kasarskis A, Lewis S, Matese JC, Richardson JE, Ringwald  ... 
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Understanding Melanocyte Transformation – A Work in Progress [chapter]

Janet Wangari-Talbot, James Goydos, Suzie Che
<span title="2011-06-30">2011</span> <i title="InTech"> Breakthroughs in Melanoma Research </i> &nbsp;
et al. 2005; Marin, Namkoong et al. 2006 ).  ...  , Shin et al. 2007; Shin, Namkoong et al. 2008a) .  ... 
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Page 77 of American Rocket Society. ARS Journal Vol. 27, Issue 8 [page]

<span title="">1957</span> <i title="American Institute of Aeronautics"> <a target="_blank" rel="noopener" href="https://archive.org/details/pub_american-rocket-society-ars-journal" style="color: black;">American Rocket Society. ARS Journal </a> </i> &nbsp;
NAGAOKA, HARUO HARRY, (m) Assist. Res. Engr., Propulsion Dept., Armour Research Foundation, 10 W. 35th St., Chicago 16, Ill. Home: 1340 W. Chase Ave., Chicago 26, Ill.  ...  (LR, SR) NAMKOONG, DAVID, JR., (m) Engr., Rocket Engine Section, Aircraft Gas Turbine Div., General Electric Co., Evendale, O. Home: 9759 Northfield Lane, Cincinnati 15, O.  ... 
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Variabilidad y estructura genética en dos poblaciones de Vicugna vicugna (Camelidae) del norte de Chile

M. CECILIA NORAMBUENA, MARCO PAREDES
<span title="">2003</span> <i title="SciELO Comision Nacional de Investigacion Cientifica Y Tecnologica (CONICYT)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/qpgbpudetfatxac3veseqixsye" style="color: black;">Revista Chilena de Historia Natural</a> </i> &nbsp;
ERIKSSON G, G NAMKOONG & JH ROBERDS (1993) Dynamic gene consevation for uncertain future. Forest Ecology and Management 62: 15-37.  ...  Aquellos señalados por Harris & Hopkinson (1976), Ayala et al. Fig. 1 : 1 Sitios de muestreo de Vicugna vicugna en la Primera y Segunda regiones de Chile.  ... 
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