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Gene-L'EXPO: a tool to extract knowledge From transcriptomes and find 'Literature-Sparse' relationships between genes and tissues

Teruyoshi Hishiki, Issei Tamada, Kousaku Okubo
2008 AMIA Annual Symposium Proceedings  
Data pairs of tissues and the genes that might be expressed there were automatically extracted from text with vocabularies for the genes and tissues.  ...  We focused on the roles played by various genes in tissues, and have developed a database that contrasts information on gene expression in tissues with PubMed text and transcriptome data.  ...  Acknowledgments This work was supported by grants from the New Energy and Industrial Technology Development Organization (NEDO) of Japan.  ... 
pmid:18999036 pmcid:PMC2656066 fatcat:ecwvwgj4wreehcqoyi5jpqbjae