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GenBank: update

D. A. Benson
2004 Nucleic Acids Research  
BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP.  ...  To access GenBank and its related retrieval and analysis services, go to the NCBI home page at: http://www.ncbi.nlm.nih.gov.  ...  BankIt can also be used by submitters to update their existing GenBank records.  ... 
doi:10.1093/nar/gkh045 pmid:14681350 pmcid:PMC308779 fatcat:yaq3wgjny5fqjgfhtqcevfyhka

GenBank

Eric W Sayers, Mark Cavanaugh, Karen Clark, Kim D Pruitt, Conrad L Schoch, Stephen T Sherry, Ilene Karsch-Mizrachi
2020 Nucleic Acids Research  
GenBank® (https://www.ncbi.nlm.nih.gov/genbank/) is a comprehensive, public database that contains 9.9 trillion base pairs from over 2.1 billion nucleotide sequences for 478 000 formally described species  ...  Recent updates include new resources for data from the SARS-CoV-2 virus, updates to the NCBI Submission Portal and associated submission wizards for dengue and SARS-CoV-2 viruses, new taxonomy queries  ...  In addition, daily GenBank incremental update files containing new and updated records since the most recent release are available in flat file format at ftp.ncbi.nlm.nih.gov/genbank/daily-nc/.  ... 
doi:10.1093/nar/gkaa1023 pmid:33196830 fatcat:og3arru36vax7kckaozbjokxtq

GenBank

D. A. Benson
2003 Nucleic Acids Research  
BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP.  ...  To access GenBank and its related retrieval and analysis services, go to the NCBI home page at: http://www.ncbi.nlm.nih.gov.  ...  BankIt can also be used by submitters to update their existing GenBank records.  ... 
doi:10.1093/nar/gkg057 pmid:12519940 pmcid:PMC165504 fatcat:snzrtcgpwrendpylqbjceiukgi

GenBank

2019 Nucleic Acids Research  
Recent updates include a new version of Genome Workbench that supports GenBank submissions, new submission wizards for viral genomes, enhancements to BankIt and improved handling of taxonomy for sequences  ...  GenBank® (www.ncbi.nlm.nih.gov/genbank/) is a comprehensive, public database that contains over 6.25 trillion base pairs from over 1.6 billion nucleotide sequences for 450 000 formally described species  ...  In addition, daily GenBank incremental update files containing new and updated records since the most recent release are available in flat file format at ftp.ncbi.nlm.nih. gov/genbank/daily-nc/.  ... 
doi:10.1093/nar/gkz956 pmid:31665464 pmcid:PMC7145611 fatcat:cpjjy4j5yzh6rlfwtvo3oufvmm

GenBank

Dennis A. Benson, Mark Cavanaugh, Karen Clark, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Eric W. Sayers
2012 Nucleic Acids Research  
BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP.  ...  To access GenBank and its related retrieval and analysis services, begin at the NCBI home page: www.ncbi.nlm.nih.gov.  ...  A script is provided in ftp.ncbi.nlm.nih.gov/genbank/tools/ to convert a set of daily updates into a cumulative update.  ... 
doi:10.1093/nar/gks1195 pmid:23193287 pmcid:PMC3531190 fatcat:jjf53eywsndvpbfees2ly4jmxi

GenBank

Dennis A. Benson, Mark Boguski, David J. Lipman, James Ostell
1994 Nucleic Acids Research  
GenBank supports distribution of the data via FTP, CD-ROM, and E-mail servers.  ...  The GenBank sequence database continues to expand its data coverage, quality control, annotation content and retrieval services for the scientific community.  ...  Files of the full release and daily updates of the GenBank database are available for anonymous FTP from 'ncbi.nlm.nih.gov' (130.14.25.1).  ... 
doi:10.1093/nar/22.17.3441 pmid:7937042 pmcid:PMC308298 fatcat:ihc23fsh7rgixocbbqu6rfweyi

GenBank

Eric W Sayers, Mark Cavanaugh, Karen Clark, Kim D Pruitt, Conrad L Schoch, Stephen T Sherry, Ilene Karsch-Mizrachi
2021 Nucleic Acids Research  
GenBank® (https://www.ncbi.nlm.nih.gov/genbank/) is a comprehensive, public database that contains 15.3 trillion base pairs from over 2.5 billion nucleotide sequences for 504 000 formally described species  ...  Recent updates include resources for data from the SARS-CoV-2 virus, including a SARS-CoV-2 landing page, NCBI Datasets, NCBI Virus and the Submission Portal.  ...  After discussing updates to SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) resources, this paper summarizes the growth of GenBank in the past year and briefly reviews recent updates and developments  ... 
doi:10.1093/nar/gkab1135 pmid:34850943 pmcid:PMC8690257 fatcat:bgeuokddybcwnjh3mpy7rah6rm

GenBank

Karen Clark, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Eric W. Sayers
2015 Nucleic Acids Research  
BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP.  ...  GenBank R (www.ncbi.nlm.nih.gov/genbank/) is a comprehensive database that contains publicly available nucleotide sequences for over 340 000 formally described species.  ...  is updated.  ... 
doi:10.1093/nar/gkv1276 pmid:26590407 pmcid:PMC4702903 fatcat:czyvsrb4gffjfop3wlvryqj7km

GenBank

Dennis A. Benson, Karen Clark, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Eric W. Sayers
2014 Nucleic Acids Research  
BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP.  ...  GenBank R (http://www.ncbi.nlm.nih.gov/genbank/) is a comprehensive database that contains publicly available nucleotide sequences for over 300 000 formally described species.  ...  A script is provided in ftp://ftp.ncbi.nlm.nih.gov/ genbank/tools/ to convert a set of daily updates into a cumulative update.  ... 
doi:10.1093/nar/gku1216 pmid:25414350 pmcid:PMC4383990 fatcat:rrzuod6pgrah3hq4nyuy6bzpyy

GenBank

Dennis A. Benson, Mark Cavanaugh, Karen Clark, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Eric W. Sayers
2016 Nucleic Acids Research  
BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP.  ...  GenBank ® (www.ncbi.nlm.nih.gov/genbank/) is a comprehensive database that contains publicly available nucleotide sequences for 370 000 formally described species.  ...  is updated.  ... 
doi:10.1093/nar/gkw1070 pmid:27899564 pmcid:PMC5210553 fatcat:u2pjbbcpwvgifdolo6wmqt5vvi

GenBank

Dennis A. Benson, Karen Clark, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Eric W. Sayers
2013 Nucleic Acids Research  
BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP.  ...  To access GenBank and its related retrieval and analysis services, begin at the NCBI home page: www.ncbi.nlm.nih.gov.  ...  A script is provided in ftp. ncbi.nlm.nih.gov/genbank/tools/ to convert a set of daily updates into a cumulative update.  ... 
doi:10.1093/nar/gkt1030 pmid:24217914 pmcid:PMC3965104 fatcat:wjdyeblmtbh2nchbemgybvfsle

GenBank

D. A. Benson
2000 Nucleic Acids Research  
Complete bimonthly releases and daily updates of the GenBank database are available by FTP. NCBI also offers a wide range of WWW retrieval and analysis services based on GenBank data.  ...  The GenBank database and related resources are freely accessible via the NCBI home page at http://www.ncbi.nlm.nih.gov  ...  BankIt can also be used by submitters to update their existing GenBank records.  ... 
doi:10.1093/nar/28.1.15 pmid:10592170 pmcid:PMC102453 fatcat:s2nnettmwjc67cirjmyhd6yjfu

GenBank

D. A. Benson, I. Karsch-Mizrachi, D. J. Lipman, J. Ostell, D. L. Wheeler
2007 Nucleic Acids Research  
BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP.  ...  After Homo sapiens, the top species in GenBank in terms of number of bases are  ...  A script is provided in the 'tools' directory of the GenBank FTP site to convert a set of daily updates into a cumulative update.  ... 
doi:10.1093/nar/gkl986 pmid:17202161 pmcid:PMC1781245 fatcat:6dlps53a35f3dh23b6dvrlsfum

GenBank

D. A. Benson
2002 Nucleic Acids Research  
Complete bimonthly releases and daily updates of the GenBank database are available by FTP. NCBI also offers a wide range of World Wide Web retrieval and analysis services based on GenBank data.  ...  The GenBank database and related resources are freely accessible via the NCBI home page at http:// www.ncbi.nlm.nih.gov.  ...  BankIt can also be used by submitters to update their existing GenBank records.  ... 
doi:10.1093/nar/30.1.17 pmid:11752243 pmcid:PMC99127 fatcat:w56phb5jxvbs7hzxbxnbkeunte

GenBank

D. A. Benson, I. Karsch-Mizrachi, D. J. Lipman, J. Ostell, E. W. Sayers
2009 Nucleic Acids Research  
BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP.  ...  To access GenBank and its related retrieval and analysis services, begin at the NCBI Homepage: www.ncbi.nlm.nih.gov.  ...  BankIt can also be used by submitters to update their existing GenBank records.  ... 
doi:10.1093/nar/gkn723 pmid:18940867 pmcid:PMC2686462 fatcat:qn6ouyx2u5fz7nrziw3kae3igi
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