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We address this by providing GFF3toEMBL, which converts the output of the most commonly used automatic annotation tool, Prokka (Seemann 2014) , and converts it to a format suitable for submission to EMBL ... all annotated genomes in EMBL/GenBank . ...doi:10.21105/joss.00080 fatcat:qyudkhjstvh47f2dxmewr7ygqm
Eukaryotic microbes have three primary mechanisms for obtaining nutrients and energy: phagotrophy, photosynthesis and osmotrophy. ... We use genome comparisons, drug sensitivity analysis and high-throughput culture arrays to investigate the ancestry of oomycete/pseudofungal characteristics, demonstrating that many of the genetic features ... Karling, who did much to improve our understanding of the microbial tree of life. ...doi:10.1098/rsob.170184 pmid:29321239 pmcid:PMC5795050 fatcat:7djkmnq6indnbegcnl4sa2ktly