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ExploreASL: an image processing pipeline for multi-center ASL perfusion MRI studies [article]

Henk JMM Mutsaerts, Jan Honza Petr, Paul FC Groot, Pieter van de Maele, Silvia Ingala, Andrew D Robertson, Lena Vaclavu, Inge Groote, Hugo Kuijf, Fernando Zelaya, Owen O'Daly, Saima Hilal (+30 others)
2019 biorxiv/medrxiv   pre-print
The procedures used in ExploreASL capitalize on published image processing advancements and address the challenges of multi-center datasets with scanner-specific processing and artifact reduction to limit  ...  In a community-wide effort towards robust and reproducible clinical ASL image processing, we developed the software package ExploreASL, allowing standardized analyses across centers and scanners.  ...  pipeline for reproducible multi-center ASL image processing.  ... 
doi:10.1101/845842 fatcat:tv5kckdhuncljeipqirv3ebtbq

ExploreASL: an image processing pipeline for multi-center ASL perfusion MRI studies

Henk J.M.M. Mutsaerts, Jan Petr, Paul Groot, Pieter Vandemaele, Silvia Ingala, Andrew D. Robertson, Lena Václavů, Inge Groote, Hugo Kuijf, Fernando Zelaya, Owen O'Daly, Saima Hilal (+31 others)
2020 NeuroImage  
The procedures used in ExploreASL capitalize on published image processing advancements and address the challenges of multi-center datasets with scanner-specific processing and artifact reduction to limit  ...  In a community-wide effort towards robust and reproducible clinical ASL image processing, we developed the software package ExploreASL, allowing standardized analyses across centers and scanners.  ...  pipeline for reproducible multi-center ASL image processing.  ... 
doi:10.1016/j.neuroimage.2020.117031 pmid:32526385 fatcat:n375sbfevnbihj22kzdymw6hi4

The European Prevention of Alzheimer's Dementia (EPAD) MRI Dataset and Processing Workflow [article]

Luigi Lorenzini, Silvia Ingala, Alle Meije Wink, Joost Kuijer, Viktor Wottschel, Mathijs Dijsselhof, Carole Sudre, Sven Haller, José Luis Molinuevo, Juan Domingo Gispert, David M Cash, David L Thomas (+18 others)
2021 bioRxiv   pre-print
The European Prevention of Alzheimer Dementia (EPAD) is a multi-center study that aims to characterize the preclinical and prodromal stages of Alzheimer's Disease.  ...  The EPAD imaging dataset includes core (3D T1w, 3D FLAIR) and advanced (ASL, diffusion MRI, and resting-state fMRI) MRI sequences.  ...  Acknowledgments This work is part of the EPAD LCS (European Prevention of Alzheimer's Dementia Longitudinal Cohort Study).  ... 
doi:10.1101/2021.09.29.462349 fatcat:vn52uzzo4fg3lb7rbh25yycagi

A Beginner's Guide to Arterial Spin Labeling (ASL) Image Processing

Patricia Clement, Jan Petr, Mathijs B. J. Dijsselhof, Beatriz Padrela, Maurice Pasternak, Sudipto Dolui, Lina Jarutyte, Nandor Pinter, Luis Hernandez-Garcia, Andrew Jahn, Joost P. A. Kuijer, Frederik Barkhof (+2 others)
2022 Frontiers in Radiology  
Starting with an introduction of the physiology and MRI technique behind ASL, and how they interact with the image processing, we present an overview of processing pipelines and explain the specific ASL  ...  Arterial spin labeling (ASL) is a non-invasive and cost-effective MRI technique for brain perfusion measurements.  ...  Use of a standardized format (like BIDS) greatly facilitates data sharing and multi-center studies 3.  ... 
doi:10.3389/fradi.2022.929533 fatcat:hhy7je2ihng2hcr5roa5loqyoa

Comparison of arterial spin labeling registration strategies in the multi-center GENetic frontotemporal dementia initiative (GENFI)

Henri J.M.M. Mutsaerts, Jan Petr, David L. Thomas, Enrico De Vita, David M. Cash, Matthias J.P. van Osch, Xavier Golay, Paul F.C. Groot, Sebastien Ourselin, John van Swieten, Robert Laforce, Fabrizio Tagliavini (+11 others)
2017 Journal of Magnetic Resonance Imaging  
To compare registration strategies to align arterial spin labeling (ASL) with 3D T1-weighted (T1w) images, with the goal of reducing the between-subject variability of cerebral blood flow (CBF) images.  ...  from the ASL image to the higher resolution anatomical 10 reference image has an impact on single-or multi-center ASL perfusion studies.  ...  Multi-center perfusion studies may 4 help to establish ASL as an imaging biomarker with the ability to study brain physiology, to 5 predict neurodegenerative disease onset and characteristics, as well  ... 
doi:10.1002/jmri.25751 pmid:28480617 pmcid:PMC6485386 fatcat:5ybpqfiwd5b3li4nrilv6uepza

Abstracts of the 5th SFCNS Congress—Swiss Federation of Clinical Neuro-Societies Basel, Switzerland, September 28–30, 2022

Swiss Federation of Clinical Neuro-Societies
2022 Clinical and Translational Neuroscience  
In total, 169 abstracts were selected for an ePoster, of which 55 were presented as short presentations during the ePoster Sessions and 5 were presented at the YouCliN Research Award Session.  ...  received and used exclusively for research support: steering committee, advisory board, and consultancy fees (Actelion, Bayer HealthCare, Biogen, BMS, Genzyme, Janssen, Merck, Novartis, Roche, Sanofi,  ...  Novartis, Roche, and Sanofi); support of educational activities (Allergan, Bayer HealthCare, Biogen, CSL Behring, Desitin, Genzyme, Merck, Novartis, Roche, Pfizer, Sanofi, Shire, and Teva); license fees for  ... 
doi:10.3390/ctn6030022 fatcat:cewku7u3ynhhxfawi7bjgddssu

A Randomized Controlled Trial on the Effects of a 12-Week High- vs. Low-Intensity Exercise Intervention on Hippocampal Structure and Function in Healthy, Young Adults

Antonia Kaiser, Liesbeth Reneman, Michelle M Solleveld, Bram F Coolen, Erik J A Scherder, Linda Knutsson, Atle Bjørnerud, Matthias J P van Osch, Jannie P Wijnen, Paul J Lucassen, Anouk Schrantee
2022
Therefore, we undertook a comprehensive, multi-modal 3T and 7T MRI randomized controlled trial (Netherlands Trial Register - NL5847) in which we randomized 52 young, non-athletic volunteers to a 12-week  ...  Our study highlights the importance of a multi-modal, whole-brain approach to assess macroscopic and microscopic changes underlying exercise-induced brain changes, to better understand the role of exercise  ...  ExploreASL: an image processing pipeline for multi-center ASL perfusion MRI studies. Neuroimage.  ... 
doi:10.3389/fpsyt.2021.780095 pmid:35126199 pmcid:PMC8814653 fatcat:rr74ftvppnambbxkou4llyscoa