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ExpertDiscovery and UGENE integrated system for intelligent analysis of regulatory regions of genes

Y Y Vaskin, I V Khomicheva, E V Ignatieva, E E Vityaev
In Silico Biology  
The integration of ExpertDiscovery system into UGENE toolkit provides a convenient environment for conducting complex research and automating the work of a biologist.  ...  For demonstration, the system has been applied for recognition of SF1, SREBP, HNF4 vertebrate binding sites and for the analysis the human gene regulatory regions that promote liver-specific transcription  ...  UGENE and Expert Discvoery integrated system The integrated system is a quite powerful tool for hierarchical regulatory regions analysis.  ... 
doi:10.3233/isb-2012-0448 pmid:22935964 fatcat:ntqcedjfxjdfzhmvgk53jjnyl4