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Enabling Object Storage via shims for Grid Middleware

Samuel Cadellin Skipsey, Shaun De Witt, Alastair Dewhurst, David Britton, Gareth Roy, David Crooks
2015 Journal of Physics, Conference Series  
to typical Object Stores via plugins and shims for Grid tools, and how well experiments can adapt their data models to them.  ...  Many of the assumptions in Object Store design are similar, but not identical, to concepts in the design of Grid Storage Elements, although the requirement for "POSIX-like" filesystem structures on top  ...  7 individual objects, relying on a mapping to provide direct access to them on demand.  ... 
doi:10.1088/1742-6596/664/4/042052 fatcat:kqqo7ipc6nf5la7gdzhyadmwxm

A Piezoelectric Ceramic Material and a Bimorph for Auto-tracking in VTR

Tomosaburo Kitamura, Yoichi Kodera, Kosuke Miyahara, Hidemasa Tamura
1981 Japanese Journal of Applied Physics  
Cu/Diamond composite heat-conducting shims E N Galashov, A A Yusuf and E M Mandrik -Enabling Object Storage via shims for Grid Middleware Samuel Cadellin Skipsey, Shaun De Witt, Alastair Dewhurst et al  ...  Phys. 20 97 View the article online for updates and enhancements.  ... 
doi:10.7567/jjaps.20s4.97 fatcat:acyqwxk7qveizgsgjtqjtrz7vq

HPC and Grid Computing for Integrative Biomedical Research

Tahsin Kurc, Shannon Hastings, Vijay Kumar, Stephen Langella, Ashish Sharma, Tony Pan, Scott Oster, David Ervin, Justin Permar, Sivaramakrishnan Narayanan, Yolanda Gil, Ewa Deelman (+4 others)
2009 The international journal of high performance computing applications  
We then discuss how middleware systems, which incorporate Grid and highperformance computing, could be employed to address the requirements.  ...  With the increasing availability of high-throughput and high-resolution instruments, the integrative biomedical research imposes many challenging requirements on software middleware systems.  ...  His current research interests include Grid-enabled storage, management, processing, and analysis of large-scale microscopy and radiology images using distributed middleware.  ... 
doi:10.1177/1094342009106192 pmid:20107625 pmcid:PMC2811341 fatcat:5p26dv5uwnbqtjjhn3lnugmqly

Taverna: lessons in creating a workflow environment for the life sciences

Tom Oinn, Mark Greenwood, Matthew Addis, M. Nedim Alpdemir, Justin Ferris, Kevin Glover, Carole Goble, Antoon Goderis, Duncan Hull, Darren Marvin, Peter Li, Phillip Lord (+5 others)
2006 Concurrency and Computation  
The my Grid project has developed the Taverna workbench for the composition and execution of workflows for the life sciences community.  ...  With regards to Grid computing, the requirements relate to the sharing of analysis and information resources rather than sharing computational power.  ...  The authors would like to acknowledge the my Grid team. Hannah Tipney developed workflows for investigation of Williams-Beuren Syndrome and is supported by The Wellcome Foundation (G/R:1061183).  ... 
doi:10.1002/cpe.993 fatcat:bunhwja6gzbjveelvuyt7tbp6i

A Survey of Big Data Archives in Time-Domain Astronomy

Manoj Poudel, Rashmi P. Sarode, Yutaka Watanobe, Maxim Mozgovoy, Subhash Bhalla
2022 Applied Sciences  
This article highlights the polystore system for integrating large-scale heterogeneous data in the astronomy domain.  ...  Even though multiple models are used for integrating these data, combining such huge amounts of data into a single model remains challenging.  ...  It comprises four layers: Database and Storage Engines, Islands, Middleware, API, and Applications.  ... 
doi:10.3390/app12126202 fatcat:tqcpp4dnlna7tcjoxpasrqul44

A Framework for the Design and Reuse of Grid Workflows [chapter]

Ilkay Altintas, Adam Birnbaum, Kim K. Baldridge, Wibke Sudholt, Mark Miller, Celine Amoreira, Yohann Potier, Bertram Ludaescher
2005 Lecture Notes in Computer Science  
While an increasing number of computational tools for the Grid become available, they are generally difficult to  ...  ., for data movement, database querying, job scheduling, remote execution etc.) are abstracted into a set of generic, reusable tasks.  ...  The SDSC Storage Resource Broker (SRB) is a client-server middleware that provides a uniform interface for connecting to heterogeneous data resources over a network and for accessing replicated data sets  ... 
doi:10.1007/11423287_11 fatcat:fgxytu53wbbprgkhnff6mp3ep4

Enabling scalable scientific workflow management in the Cloud

Yong Zhao, Youfu Li, Ioan Raicu, Shiyong Lu, Wenhong Tian, Heng Liu
2015 Future generations computer systems  
Then, we present the key challenges in supporting Cloud workflows, and present our reference framework for scientific workflow management in the Cloud.  ...  Scientific workflow management plays a very important role for scientific computing and application coordination, while Cloud computing offers scalability and resource on-demand.  ...  These include topics ranging from authentication, authorization, scheduling, virtualization, middleware design, interface design, and cyber security, to the optimization of grid-enabled and cloud-enabled  ... 
doi:10.1016/j.future.2014.10.023 fatcat:myqbnunkk5dmdml4stdgvedk2y

Bringing Scientific Workflow to the Masses via Pegasus and HUBzero

Michael McLennan, Steven M. Clark, Frank McKenna, Ewa Deelman, Mats Rynge, Karan Vahi, Derrick Kearney, Carol X. Song
2013 International Workshop on Science Gateways  
The HUBzero platform for scientific collaboration provides a venue for building and delivering tools to researchers and educators.  ...  Scientific workflow managers are powerful tools for handling large computational tasks.  ...  its unique middleware.  ... 
dblp:conf/iwsg/McLennanCMDRVKS13 fatcat:dpkhztkt7fh3vndvv6ubxclqny

The Transformative Effect of the Internet of Things on Business and Society

Michel Avital, Alan R. Dennis, Matti Rossi, Carsten Sørensen, Aaron French
2019 Communications of the Association for Information Systems  
The paper concludes with a future direction for IoT.  ...  Overall, the panel identified a sixpronged IS research agenda for IoT that comprises the IoT's impact on business and society, IoT monetization and end-user services, the IoT as a distributed platform,  ...  gratefully acknowledge the panel audience at "Internet of Things (IoT): Opportunities and Challenges to Business, Society, and IS Research" panel at the 2017 International Conference on Information Systems for  ... 
doi:10.17705/1cais.04405 fatcat:uckgjmugrnd6tauzatqyhzbs3q

Facilitating e-Science Discovery Using Scientific Workflows on the Grid [chapter]

Jianwu Wang, Prakashan Korambath, Seonah Kim, Scott Johnson, Kejian Jin, Daniel Crawl, Ilkay Altintas, Shava Smallen, Bill Labate, Kendall N. Houk
2011 Guide to e-Science  
To demonstrate how these services can be seamlessly assembled, an open source scientific workflow system, called Kepler, is integrated into the University of California Grid.  ...  This chapter explains how scientific workflow systems can facilitate e-Science discovery in Grid environments by providing features including scientific process automation, resource consolidation, parallelism  ...  Acknowledgments The authors would like to thank the rest of the Kepler and UC Grid community for their collaboration.  ... 
doi:10.1007/978-0-85729-439-5_13 dblp:series/ccn/WangKKJJCASLH11 fatcat:66f2iqtcabbe3dp6ijprsavjgi

Collaborative scientific workflows supporting collaborative science

Shiyong Lu, Jia Zhang
2011 International Journal of Business Process Integration and Management  
Recently, scientific workflows have emerged for scientists to integrate distributed computations, datasets, and analysis tools to enable and accelerate scientific discovery.  ...  This paper presents a disciplinary definition of this term, discusses the opportunities, requirements, and challenges of collaborative scientific workflows for the enablement of scientific collaboration  ...  of tape or permanent storage for best performance.  ... 
doi:10.1504/ijbpim.2011.040209 fatcat:5op5on2xgffhjabh7wgjrfuhai

Automated Syntactic Medation forWeb Service Integration

Martin Szomszor, Terry Payne, Luc Moreau
2006 2006 IEEE International Conference on Web Services (ICWS'06)  
As the Web Services and Grid community adopt Semantic Web technology, we observe a shift towards higherlevel workflow composition and service discovery practices.  ...  While this provides excellent functionality to non-expert users, more sophisticated middleware is required to hide the details of service invocation and service integration.  ...  By enumerating the types of shims required in bioinformatics Grids and classifying all instances of shim services, it is hoped that the necessary translation components could be automatically inserted  ... 
doi:10.1109/icws.2006.34 dblp:conf/icws/SzomszorPM06 fatcat:p72jvubr2rgjjimr2wedvaorea

Introducing Distributed Dynamic Data-intensive (D3) Science: Understanding Applications and Infrastructure [article]

Shantenu Jha, Daniel S. Katz, Andre Luckow, Omer Rana, Yogesh Simmhan, Neil Chue Hong
2016 arXiv   pre-print
While "static" data applications have received significant attention, the characteristics, requirements, and software systems for the analysis of large volumes of dynamic, distributed data, and data-intensive  ...  We thank Simon Dobson, Jon Weissman and Jon Blower for useful initial discussions, as well as 3DPAS workshop attendees.  ...  Other important issues The application is built using Globus Grid Services for wrapping the MINDS analysis applications and for providing storage services for events.  ... 
arXiv:1609.03647v1 fatcat:jpu4s2d3nfg3hntaagekozjv2m

Introducing distributed dynamic data-intensive (D3) science: Understanding applications and infrastructure

Shantenu Jha, Daniel S. Katz, Andre Luckow, Neil Chue Hong, Omer Rana, Yogesh Simmhan
2017 Concurrency and Computation  
The characteristics, requirements, and software systems for the analysis of large volumes of dynamic, distributed and data intensive have however received relatively less.  ...  Other important issues The application is built using Globus Grid Services for wrapping the MINDS analysis applications and for providing storage services for events.  ...  The information processing algorithms are packaged as autonomous software agents that are managed by a multi agent system infrastructure (middleware) and humans (via GUIs).  ... 
doi:10.1002/cpe.4032 fatcat:4cwhp5kgojc2hfftidamig72zy

An approach for pipelining nested collections in scientific workflows

Timothy M. McPhillips, Shawn Bowers
2005 SIGMOD record  
Moreover, he thanks Gianluigi Greco for his recent contribution to the weighted extension, and Alfredo Mazzitelli for his valuable work in designing and implementing the tools for experiments.  ...  When you see these people, please thank them personally for their role in achieving quick reviews of submitted papers.  ...  middleware and by abundant storage capacity.  ... 
doi:10.1145/1084805.1084809 fatcat:sgtpcat7vzc3veb4dx2jgskpte
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