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Efficient Low-Redundancy Codes for Correcting Multiple Deletions [article]

Joshua Brakensiek, Venkatesan Guruswami, Samuel Zbarsky
<span title="2019-05-20">2019</span> <i > arXiv </i> &nbsp; <span class="release-stage" >pre-print</span>
We consider the problem of constructing binary codes to recover from k-bit deletions with efficient encoding/decoding, for a fixed k.  ...  For any fixed k, we construct a binary code with c_k n redundancy that can be decoded from k deletions in O_k(n ^4 n) time.  ...  for correcting two deletions.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/1507.06175v2">arXiv:1507.06175v2</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/myxd22bs4bfnjc52wan6n3gcjy">fatcat:myxd22bs4bfnjc52wan6n3gcjy</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200823233908/https://arxiv.org/pdf/1507.06175v2.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/00/ee/00ee266b51631d8d9094803232d23c88575839b9.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/1507.06175v2" title="arxiv.org access"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> arxiv.org </button> </a>

Construction of efficient OR-based deletion - tolerant coding schemes

P. Sobe, K. Peter
<span title="">2006</span> <i title="IEEE"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/t3x4vqewrncrfgn2wu7cafsbsq" style="color: black;">Proceedings 20th IEEE International Parallel &amp; Distributed Processing Symposium</a> </i> &nbsp;
We present a scheme that encodes input data in a highly redundant code and exploits that redundancy for a fault tolerance scheme.  ...  The compression not only eliminates the introduced redundancy of the used code, it also eliminates redundancy in the input data.  ...  The schemes add redundancy and use it for error detection, error correction or deletion correction.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/ipdps.2006.1639663">doi:10.1109/ipdps.2006.1639663</a> <a target="_blank" rel="external noopener" href="https://dblp.org/rec/conf/ipps/SobeP06.html">dblp:conf/ipps/SobeP06</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/xcki4cd3kjft7ancqdt5sox4iu">fatcat:xcki4cd3kjft7ancqdt5sox4iu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170706112126/http://www.cecs.uci.edu/%7Epapers/ipdps06/pdfs/25-DPDNS-paper-1.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/f5/af/f5af87c4da4e0169501c027a1034369620bb2435.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/ipdps.2006.1639663"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> ieee.com </button> </a>

An HARQ Based Optimized Error Correction Technique

Kaustuv Kunal, R. C. Tripathi, Vrijendra Singh
<span title="2010-09-10">2010</span> <i title="Foundation of Computer Science"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/b637noqf3vhmhjevdfk3h5pdsu" style="color: black;">International Journal of Computer Applications</a> </i> &nbsp;
The matrix size affects the multiple bit correction efficiency and is chosen based on channel efficiency.  ...  BCH code [3, 4, 5] ,a multiple bit ECC, is a further generalization of hamming code where 2m-1 bits comprising of mt redundant bits enable correction up to t-bits error.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.5120/1353-1826">doi:10.5120/1353-1826</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/wyf2kqh2iree7bjb7wwn2zzlru">fatcat:wyf2kqh2iree7bjb7wwn2zzlru</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20131224195723/http://www.ijcaonline.org/volume9/number1/pxc3871826.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/bb/a4/bba4baa122bef271f61b9b4d6525e830f8c99da0.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.5120/1353-1826"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

Robust remote data checking

Reza Curtmola, Osama Khan, Randal Burns
<span title="">2008</span> <i title="ACM Press"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/lqa4sx5c3rbbbl275ev4o5jf5a" style="color: black;">Proceedings of the 4th ACM international workshop on Storage security and survivability - StorageSS &#39;08</a> </i> &nbsp;
We distill the key performance and security requirements for integrating forward error-correcting codes into PDP and describe an encoding scheme and file organization for robust data possession that meets  ...  Through the careful integration of forward error-correcting codes and remote data checking, a system can prove possession with arbitrarily high probability.  ...  For efficiency, both use RS codes with fixed parameters applied to subportions of the file.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1145/1456469.1456481">doi:10.1145/1456469.1456481</a> <a target="_blank" rel="external noopener" href="https://dblp.org/rec/conf/storagess/CurtmolaKB08.html">dblp:conf/storagess/CurtmolaKB08</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/wlbeei62ynacrot446lg7s625a">fatcat:wlbeei62ynacrot446lg7s625a</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170809003910/http://www.cs.jhu.edu/~okhan/pdpred-final.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/68/45/6845eae018cdaa8446456b39b1a524ec353e751f.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1145/1456469.1456481"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> acm.org </button> </a>

Codes for Correcting Localized Deletions [article]

Serge Kas Hanna, Salim El Rouayheb
<span title="2021-01-08">2021</span> <i > arXiv </i> &nbsp; <span class="release-stage" >pre-print</span>
Moreover, these codes are systematic; have low redundancy; and have efficient deterministic encoding and decoding algorithms.  ...  We consider the problem of constructing binary codes for correcting deletions that are localized within certain parts of the codeword that are unknown a priori.  ...  These codes have several desirable properties such as: low redundancy, asymptotically optimal rate, efficient encoding and decoding, and low probability of decoding failure.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/1711.01941v4">arXiv:1711.01941v4</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/jo4f7hpdkbh47ihupc3sljmoke">fatcat:jo4f7hpdkbh47ihupc3sljmoke</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210115155059/https://arxiv.org/pdf/1711.01941v4.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/51/70/51705b1252f37a837b962c42e1b192928e95f9c6.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/1711.01941v4" title="arxiv.org access"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> arxiv.org </button> </a>

Guest Editorial Special Issue: "From Deletion-Correction to Graph Reconstruction: In Memory of Vladimir I. Levenshtein"

Alexander Barg, Lara Dolecek, Ryan Gabrys, Gyula O. H. Katona, János Körner, Andrew McGregor, Olgica Milenkovic, Sihem Mesnager, Gilles Zémor
<span title="">2021</span> <i title="Institute of Electrical and Electronics Engineers"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/niovmjummbcwdg4qshgzykkpfu" style="color: black;">IEEE Transactions on Information Theory</a> </i> &nbsp;
The article "On optimal k-deletion correcting codes," by Sima and Bruck, addresses the challenging problem of designing low-redundancy k-deletion error-correcting codes and provides explicit constructions  ...  Two other contributions focus on coding theory methods for DNA-based data storage, in the context of deletion and tandem error-correction.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/tit.2021.3072555">doi:10.1109/tit.2021.3072555</a> <a target="_blank" rel="external noopener" href="https://dblp.org/rec/journals/tit/BargDGKKMMMZ21.html">dblp:journals/tit/BargDGKKMMMZ21</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/ebzt3z72yjfwtbiqczqjqzwzk4">fatcat:ebzt3z72yjfwtbiqczqjqzwzk4</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210605112308/https://ieeexplore.ieee.org/ielx7/18/9437276/09437360.pdf?tp=&amp;arnumber=9437360&amp;isnumber=9437276&amp;ref=" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/20/ef/20efb05b38cc1a046983f8913496baaef10bf39a.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/tit.2021.3072555"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

Improved read/write cost tradeoff in DNA-based data storage using LDPC codes [article]

Shubham Chandak, Kedar Tatwawadi, Billy Lau, Jay Mardia, Matthew Kubit, Joachim Neu, Peter Griffin, Mary Wootters, Tsachy Weissman, Hanlee Ji
<span title="2019-09-16">2019</span> <i title="Cold Spring Harbor Laboratory"> bioRxiv </i> &nbsp; <span class="release-stage" >pre-print</span>
The typical approach is to use separate codes for handling errors and erasures, but there is limited understanding of the efficiency of this framework.  ...  , focusing on aspects such as error correction for synthesis/sequencing errors and erasure correction for handling missing sequences.  ...  Acknowledgments We thank Andrea Montanari for helpful discussions. Funding We acknowledge funding from NSF/SRC (award number 1807371) under the SemiSynBio program and from Beck-  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1101/770032">doi:10.1101/770032</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/teq7iaduibdadptdbwqqnvdr2m">fatcat:teq7iaduibdadptdbwqqnvdr2m</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200711102719/https://www.biorxiv.org/content/biorxiv/early/2019/09/16/770032.full.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/fb/30/fb30f5f56c23766e8e32930183c49575660e2b75.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1101/770032"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> biorxiv.org </button> </a>

Moment Balancing Templates: Universal Constructions to Add Insertion/Deletion Correction Capability to Arbitrary Error Correcting or Constrained Codes

Hendrik C. Ferreira, Khaled A. S. Abdel-Ghaffar, Ling Cheng, Theo G. Swart
<span title="">2007</span> <i title="IEEE"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/ux5tf45dtrgptnezraiii73msm" style="color: black;">2007 IEEE International Symposium on Information Theory</a> </i> &nbsp;
If the template is carefully designed, the number of additional redundant bits for the insertion/deletion correction can be kept smallin some cases of the same order as for Hamming codes.  ...  Using some number theoretic constructions in the literature, insertion/deletion correction can then be achieved.  ...  Similarly, we plan to also investigate universal or optimized templates for the multiple insertion/deletion correcting codes in [13] , and other constructions.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/isit.2007.4557143">doi:10.1109/isit.2007.4557143</a> <a target="_blank" rel="external noopener" href="https://dblp.org/rec/conf/isit/FerreiraA0S07.html">dblp:conf/isit/FerreiraA0S07</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/kniv5znjxjgx3l4ncc3h4sbvgi">fatcat:kniv5znjxjgx3l4ncc3h4sbvgi</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170922234550/https://ujcontent.uj.ac.za/vital/access/services/Download/uj:15993/SOURCE1" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/06/fb/06fbf8222912ad27cc0bba101d3a53a63e2fe1c7.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/isit.2007.4557143"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> ieee.com </button> </a>

Encoding movies and data in DNA storage

Naveen Goela, Jean Bolot
<span title="">2016</span> <i title="IEEE"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/qpopm6uubfd4ddim7xa2kl7xpm" style="color: black;">2016 Information Theory and Applications Workshop (ITA)</a> </i> &nbsp;
Focusing on error-correction methods and codes, a systems level design is presented for encoding movies and digital information in DNA storage.  ...  ., movies, audio) is compressed, efficiently encoded with redundant information, modulated, and stored in multiple DNA oligonucleotide strands.  ...  ERROR CORRECTION CODES In DNA storage, several types of errors occur including: (1) Insertion, deletion, substitution errors within oligonucleotides; (2) Missing DNA strands; (3) Synchronization errors  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/ita.2016.7888163">doi:10.1109/ita.2016.7888163</a> <a target="_blank" rel="external noopener" href="https://dblp.org/rec/conf/ita/GoelaB16.html">dblp:conf/ita/GoelaB16</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/3u6njr65o5fgzj3rqidnauzw3a">fatcat:3u6njr65o5fgzj3rqidnauzw3a</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20160510211824/http://ita.ucsd.edu/workshop/16/files/paper/paper_3187.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/33/3b/333bf10ddac08a07c267f791c835bcb685687413.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1109/ita.2016.7888163"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> ieee.com </button> </a>

List Decoding of Deletions Using Guess & Check Codes [article]

Serge Kas Hanna, Salim El Rouayheb
<span title="2019-04-29">2019</span> <i > arXiv </i> &nbsp; <span class="release-stage" >pre-print</span>
Guess & Check (GC) codes are systematic binary codes that can correct multiple deletions, with high probability.  ...  GC codes have logarithmic redundancy in the length of the message k, and the encoding and decoding algorithms of these codes are deterministic and run in polynomial time for a constant number of deletions  ...  There has also been multiple recent works which study codes that can correct multiple deletions with low probability of error [1] , [12] - [14] .  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/1810.07281v2">arXiv:1810.07281v2</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/3pfpbl5vlvduxoymnt4cqw6pqy">fatcat:3pfpbl5vlvduxoymnt4cqw6pqy</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200911060230/https://arxiv.org/pdf/1810.07281v2.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/c6/17/c617893bb7ad23d9f1ca69cb0ba1aa75a07e0213.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/1810.07281v2" title="arxiv.org access"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> arxiv.org </button> </a>

An Indel-Resistant Error-Correcting Code for DNA-Based Information Storage [article]

William H. Press, John A. Hawkins
<span title="2018-12-03">2018</span> <i > arXiv </i> &nbsp; <span class="release-stage" >pre-print</span>
-- in effect an inefficient multiple-repetition code.  ...  Previous work has utilized ECCs that can correct substitution errors, but not insertion or deletion errors (indels), instead relying on sequencing depth and multiple alignment to detect and correct indels  ...  Though this is a central part of previously implemented DNA error-correction schemes, it also tends to be left unaccounted for in claims for code efficiency.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/1812.01112v1">arXiv:1812.01112v1</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/vtdiasgqtncbzpbrv4pd6qsx3y">fatcat:vtdiasgqtncbzpbrv4pd6qsx3y</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200911094357/https://arxiv.org/pdf/1812.01112v1.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/98/2b/982b10c4864777af9648b4eec98e10ccd7bbffcb.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/1812.01112v1" title="arxiv.org access"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> arxiv.org </button> </a>

Punctured Turbo Codes for Bandwidth-efficient Transmission

Shobha Rekh, S. Subha Rani, A. Shanmugam, John Kulothungan Joshua
<span title="2006-10-01">2006</span> <i title="Defence Scientific Information and Documentation Centre"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/sbz4qubtlrhx5a2wpmby2l2qfu" style="color: black;">Defence Science Journal</a> </i> &nbsp;
The design criterion for choosing the best puncturing patterns is based on the minimum weight of code words and their multiplicities.  ...  Hence, it is necessary to design turbo codes with an efficient puncturing pattern so that the performance of the punctured code is also improved in spite of deletion of few bits before transmission.  ...  It is possible to get different code rates for the existing turbo codes to utilise the bandwidth efficiency. Puncturing is a means to achieve different code rates.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.14429/dsj.56.1924">doi:10.14429/dsj.56.1924</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/f3udwi4m2vbw3gmdppsour7xme">fatcat:f3udwi4m2vbw3gmdppsour7xme</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20181030043600/http://publications.drdo.gov.in/ojs/index.php/dsj/article/download/1924/967" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/90/0d/900d7696a99e03c8c852fb8e57c222690dd7ae6b.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.14429/dsj.56.1924"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> Publisher / doi.org </button> </a>

Chamaeleo: a robust library for DNA storage coding schemes [article]

Zhi Ping, Haoling Zhang, Shihong Chen, Qianlong Zhuang, Sha Zhu, Yue Shen
<span title="2020-01-03">2020</span> <i title="Cold Spring Harbor Laboratory"> bioRxiv </i> &nbsp; <span class="release-stage" >pre-print</span>
Chamaeleo adheres to the concept of high aggregation and low coupling for software design which will enhance the performance efficiency.  ...  Chamaeleo is currently the only collection library that focuses on adapting multiple well-accepted coding schemes for DNA storage.  ...  For the first way, see Fig 2(a) , when the redundancy is times, the coding efficiency of the coding scheme will becomes 1 of the original one.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1101/2020.01.02.892588">doi:10.1101/2020.01.02.892588</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/ax5gqpegxfezreruz4d3bbswne">fatcat:ax5gqpegxfezreruz4d3bbswne</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200509062852/https://www.biorxiv.org/content/biorxiv/early/2020/03/19/2020.01.02.892588.full.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/11/f5/11f5cdd668d8b39c3b6e8775da13f29793b1aeb4.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1101/2020.01.02.892588"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> biorxiv.org </button> </a>

Portable and Error-Free DNA-Based Data Storage [article]

S. M. Hossein Tabatabaei Yazdi, Ryan Gabrys, Olgica Milenkovic
<span title="2016-10-05">2016</span> <i title="Cold Spring Harbor Laboratory"> bioRxiv </i> &nbsp; <span class="release-stage" >pre-print</span>
sequencing via new anchored iterative alignment and insertion/deletion error-correcting codes.  ...  All existing architectures enable reading and writing, while some also allow for editing and elementary sequencing error correction.  ...  Note that alignment does not require any coding redundancy, while balancing uses typical sequences and, as a result of this, has a high coding rate of 0.88.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1101/079442">doi:10.1101/079442</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/njposaszzbfu7nqootds7cndsq">fatcat:njposaszzbfu7nqootds7cndsq</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190501103721/https://www.biorxiv.org/content/biorxiv/early/2016/10/19/079442.full.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/35/c7/35c79a9130f80dfd9733baae23072f6433dca8d7.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1101/079442"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> biorxiv.org </button> </a>

A Reliable and Secure Cloud Storage Schema Using Multiple Service Providers

Haiping Xu, Deepti Bhalerao
<span title="2015-07-01">2015</span> <i title="KSI Research Inc. and Knowledge Systems Institute Graduate School"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/tmv5k3vzsffn7oepnliq7vwghq" style="color: black;">Proceedings of the 27th International Conference on Software Engineering and Knowledge Engineering</a> </i> &nbsp;
In our approach, we view multiple cloud-based storage services as virtual independent disks for storing redundant data encoded using erasure codes.  ...  uploads them into multiple cloud storages.  ...  Reed-Solomon Coding for Cloud Based Storage Use of error-correction codes for redundancy has become prevalent due to its various advantages.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.18293/seke2015-45">doi:10.18293/seke2015-45</a> <a target="_blank" rel="external noopener" href="https://dblp.org/rec/conf/seke/XuB15.html">dblp:conf/seke/XuB15</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/5n4ejkakcrg2lisegtqlr2cv5u">fatcat:5n4ejkakcrg2lisegtqlr2cv5u</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190218122433/http://pdfs.semanticscholar.org/0bbf/3762ac41f007591ba107b596d0028f345763.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/0b/bf/0bbf3762ac41f007591ba107b596d0028f345763.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.18293/seke2015-45"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>
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