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Effects of Tissue-Specific Functional Magnetic Resonance Imaging Signal Regression on Resting-State Functional Connectivity

Reinder Vos de Wael, Fahmeed Hyder, Garth J. Thompson
<span title="">2017</span> <i title="Mary Ann Liebert Inc"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/v4t2k6us4zdn7imahrf7iujoiq" style="color: black;">Brain Connectivity</a> </i> &nbsp;
magnetic resonance imaging (R-fMRI) data.  ...  However, a recent study demonstrated that white matter signal regression (WMSR) produced a similar loss of neurometabolic information to global (whole-brain) signal regression (GSR) in resting-state functional  ...  G.J.T. and F.H. would like to acknowledge Vinayak Mishra, a member of the National Junior Honors Society at Hill Regional Career High School, New Haven, CT, who worked on early aspects of this study through  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1089/brain.2016.0465">doi:10.1089/brain.2016.0465</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/28825320">pmid:28825320</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC5653143/">pmcid:PMC5653143</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/sjqfodvztre47oehomgdk7eija">fatcat:sjqfodvztre47oehomgdk7eija</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20220119133159/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC5653143&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/9b/f9/9bf9a43e3ba2e1a1f98f2c93c77a9a9224bb8a61.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1089/brain.2016.0465"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5653143" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

How to Perform and Interpret Functional Magnetic Resonance Imaging Studies in Functional Gastrointestinal Disorders

In-Seon Lee, Hubert Preissl, Paul Enck
<span title="2017-04-30">2017</span> <i title="The Korean Society of Neurogastroenterology and Motility"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/hnjmjp6r4vawda67mfxmvg45py" style="color: black;">Journal of Neurogastroenterology and Motility</a> </i> &nbsp;
The application of functional magnetic resonance imaging (fMRI) technique in functional gastrointestinal disorders should provide novel methods of diagnosing and treating patients.  ...  Functional neuroimaging studies have revealed the importance of the role of cognitive and psychological factors and the dysregulation of the brain-gut axis in functional gastrointestinal disorder patients  ...  Conflicts of interest: None.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.5056/jnm16196">doi:10.5056/jnm16196</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/28256119">pmid:28256119</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC5383114/">pmcid:PMC5383114</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/k5p374slcfhtdfdjehpcumlqki">fatcat:k5p374slcfhtdfdjehpcumlqki</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190305011708/http://pdfs.semanticscholar.org/e3a6/690eefb9b90a4ed9845f6f143359ca1f5f80.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/e3/a6/e3a6690eefb9b90a4ed9845f6f143359ca1f5f80.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.5056/jnm16196"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5383114" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Functional Magnetic Resonance Imaging with Arterial Spin Labeling: Techniques and Potential Clinical and Research Applications

Ju Ho Kim, Dae Seob Choi, Sung Eun Park, Ho Cheol Choi, Seong Hu Kim
<span title="">2017</span> <i title="Korean Society of Magnetic Resonance in Medicine (KAMJE)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/w3v7oxwwuvgpzijg5z7zsdnf7i" style="color: black;">Investigative Magnetic Resonance Imaging</a> </i> &nbsp;
Purpose: To describe technical methods for functional magnetic resonance imaging (fMRI) study with arterial spin labeling (ASL) compared to blood oxygenation leveldependent (BOLD) technique and discuss  ...  For rs-fMRI of sensorimotor network, functional connectivity showed similar results between BOLD and ASL.  ...  Recently, with improved signal to noise ratio (SNR) and spatial resolution such as pseudo-continuous technique, ASL can also be applied to functional magnetic resonance imaging (fMRI) study (5) .  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.13104/imri.2017.21.2.91">doi:10.13104/imri.2017.21.2.91</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/smd7zszy45davapjwbayhurd7u">fatcat:smd7zszy45davapjwbayhurd7u</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180724095649/https://synapse.koreamed.org/Synapse/Data/PDFData/1040IMRI/imri-21-91.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/3e/37/3e378af90f021a9095bea3f7912e13afd44c1985.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.13104/imri.2017.21.2.91"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

Quantitative Assessment of Brain Networks in Children With Sturge-Weber Syndrome Using Resting State Functional Magnetic Resonance Imaging (MRI)

Jeong-Won Jeong, Harry T. Chugani, Michael E. Behen, William Guy, Csaba Juhász
<span title="2012-12-26">2012</span> <i title="SAGE Publications"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/rmpxavahmffr7ke6bmgjhwsvdu" style="color: black;">Journal of Child Neurology</a> </i> &nbsp;
In this study, we examined whether topologic network analysis, using resting state functional Magnetic Resonance Imaging (MRI), can detect abnormalities of functional brain connectivity in children with  ...  The presented approach can detect early functional abnormalities of specific brain networks in children with Sturge-Weber syndrome.  ...  Recently, resting state functional Magnetic Resonance Imaging (MRI) has facilitated the non-invasive mapping of large-scale neural network dysfunction 13 .  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1177/0883073812469296">doi:10.1177/0883073812469296</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/23271758">pmid:23271758</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC5738919/">pmcid:PMC5738919</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/luqnzi6k2rejti7bujjp7vopiy">fatcat:luqnzi6k2rejti7bujjp7vopiy</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200209204745/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC5738919&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/5e/02/5e02e2102788e2e9048d258fe57836060e7887b3.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1177/0883073812469296"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> sagepub.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5738919" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Optical imaging of disrupted functional connectivity following ischemic stroke in mice

Adam Q. Bauer, Andrew W. Kraft, Patrick W. Wright, Abraham Z. Snyder, Jin-Moo Lee, Joseph P. Culver
<span title="">2014</span> <i title="Elsevier BV"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/sa477uo7lveh7hchpikpixop5u" style="color: black;">NeuroImage</a> </i> &nbsp;
Thus, several results were strongly dependent on how the resting-state data were processed.  ...  Specifically, global signal regression alone resulted in apparently distorted functional connectivity measures in the intact hemisphere.  ...  Abbreviations MRI magnetic resonance imaging fMRI functional magnetic resonance imaging fcMRI functional connectivity magnetic resonance imaging OIS optical intrinsic signal imaging fcOIS functional connectivity  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.neuroimage.2014.05.051">doi:10.1016/j.neuroimage.2014.05.051</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/24862071">pmid:24862071</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC4332714/">pmcid:PMC4332714</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/rfa775nwh5fylowc3kho22wvoy">fatcat:rfa775nwh5fylowc3kho22wvoy</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200428132837/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC4332714&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/8e/03/8e0321b0740d9ec03e383041f7bb7b9a038ea0b0.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.neuroimage.2014.05.051"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> elsevier.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4332714" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Magnetic Resonance Imaging in Huntington's Disease [chapter]

Sarah Gregory, Rachael I. Scahill, Geraint Rees, Sarah Tabrizi
<span title="">2018</span> <i title="Springer New York"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/6v4flwr6afbfrmhdyu6xe3dyvm" style="color: black;">Msphere</a> </i> &nbsp;
Resting-state analyses For resting state data analyses, the main focus is on connectivity.  ...  Magnetic Resonance Imaging in Huntington's disease Magnetic Resonance Imaging (MRI) is a non-invasive technique used routinely to image the body in both clinical and research settings.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1007/978-1-4939-7825-0_16">doi:10.1007/978-1-4939-7825-0_16</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/29856026">pmid:29856026</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/zld2tk3hnzbdddn4kul62efe5y">fatcat:zld2tk3hnzbdddn4kul62efe5y</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200311063549/https://discovery.ucl.ac.uk/id/eprint/10051225/3/Tabrizi_ch%2008%20Tabrizi%20edits%20plus_CleanCopy_SG.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/ad/2d/ad2d9fbe82ef6ddcc89c5e50e27ffa986393c116.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1007/978-1-4939-7825-0_16"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> springer.com </button> </a>

Advantages and Challenges of Small Animal Magnetic Resonance Imaging as a Translational Tool

Carolin Hoyer, Natalia Gass, Wolfgang Weber-Fahr, Alexander Sartorius
<span title="">2014</span> <i title="S. Karger AG"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/vofuivbe2va4jd53wqnysyzcam" style="color: black;">Neuropsychobiology</a> </i> &nbsp;
In this review, we discuss advantages and challenges of animal MRI and provide an overview of the major structural (voxel-based morphometry and diffusion tensor imaging) and functional approaches [resting-state  ...  The utilization of magnetic resonance imaging (MRI) methods in rodent models of psychiatric disorders provides considerable benefits for the identification of disease-associated brain circuits and metabolic  ...  Resting-State fMRI Although the first report on human brain functional connectivity in the absence of any stimulus or task was already published as far back as 1995 [21] , only recently have resting  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1159/000360859">doi:10.1159/000360859</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/24863537">pmid:24863537</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/belz7e6dx5eyzorm7igkfdxg2u">fatcat:belz7e6dx5eyzorm7igkfdxg2u</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190217074948/http://pdfs.semanticscholar.org/0413/138a431d049d083809e2d8326dcc41d2cefa.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/04/13/0413138a431d049d083809e2d8326dcc41d2cefa.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1159/000360859"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

Default Mode Connectivity in Youth With Perinatally Acquired HIV

Megan M. Herting, Kristina A. Uban, Paige L. Williams, Prapti Gautam, Yanling Huo, Kathleen Malee, Ram Yogev, John Csernansky, Lei Wang, Sharon Nichols, Russell Van Dyke, Elizabeth R. Sowell
<span title="">2015</span> <i title="Ovid Technologies (Wolters Kluwer Health)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/2fgvdq2bsrdtbigpwmptmgucfm" style="color: black;">Medicine</a> </i> &nbsp;
HIV/AIDS Cohort Study, PHIV = perinatally acquired human immunodeficiency virus, RNA = ribonucleic acid, ROI = region-of-interest, rs-fcMRI = resting-state functional connectivity magnetic resonance imaging  ...  We evaluated whether markers of HIV disease severity relate to default mode resting-state functional connectivity in PHIVþ youth.  ...  Ã Based on resting-state pediatric imaging template.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1097/md.0000000000001417">doi:10.1097/md.0000000000001417</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/26376381">pmid:26376381</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC4635795/">pmcid:PMC4635795</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/kxuewlvuojbblccxccs2xppwya">fatcat:kxuewlvuojbblccxccs2xppwya</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190303002333/http://pdfs.semanticscholar.org/bf30/416c5ab8cde884bd69af4b2afff7ed747389.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/bf/30/bf30416c5ab8cde884bd69af4b2afff7ed747389.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1097/md.0000000000001417"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4635795" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Head Motion and Correction Methods in Resting-state Functional MRI

Masami GOTO, Osamu ABE, Tosiaki MIYATI, Hidenori YAMASUE, Tsutomu GOMI, Tohoru TAKEDA
<span title="">2016</span> <i title="Japanese Society for Magnetic Resonance in Medicine"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/bp7c2gl4e5a7vbyzuvm6llfbsi" style="color: black;">Magnetic Resonance in Medical Sciences</a> </i> &nbsp;
Resting-state functional magnetic resonance imaging (RS-fMRI) is used to investigate brain functional connectivity at rest.  ...  of human physiological noise caused by subject motion, especially motion of the head, on functional connectivity at rest detected with RS-fMRI.  ...  Acknowledgments This study was supported by a Grant-in-Aid for Scientific Research on Innovative Areas (Comprehensive Brain Science Network) from the Ministry of Education, Science, Sports and Culture  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.2463/mrms.rev.2015-0060">doi:10.2463/mrms.rev.2015-0060</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/26701695">pmid:26701695</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC5600054/">pmcid:PMC5600054</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/zw5roy3ywfestjoio2igdby52u">fatcat:zw5roy3ywfestjoio2igdby52u</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190225054925/http://pdfs.semanticscholar.org/5e74/9503f57395eb796f74046dc69ab35d17ca6c.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/5e/74/5e749503f57395eb796f74046dc69ab35d17ca6c.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.2463/mrms.rev.2015-0060"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5600054" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Structural substrates for resting network disruption in temporal lobe epilepsy

Natalie L. Voets, Christian F. Beckmann, David M. Cole, SeokJun Hong, Andrea Bernasconi, Neda Bernasconi
<span title="2012-06-04">2012</span> <i title="Oxford University Press (OUP)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/3yly6om4ynhcta4fdjenhrdk5y" style="color: black;">Brain</a> </i> &nbsp;
Magnetic resonance imaging methods that measure interregional brain signalling at rest have been advanced as powerful tools to probe organizational properties of functional networks.  ...  In drug-resistant temporal lobe epilepsy, resting functional magnetic resonance imaging studies have primarily employed region of interest approaches that preclude a comprehensive evaluation of large-scale  ...  Magnetic resonance imaging acquisition Magnetic resonance images were acquired on a 3 T Siemens Trio Trim scanner using a 32-channel phased-array head coil.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/brain/aws137">doi:10.1093/brain/aws137</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/22669081">pmid:22669081</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/56r532pb4bfbfmmoxqfyq5agqu">fatcat:56r532pb4bfbfmmoxqfyq5agqu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190225153605/http://pdfs.semanticscholar.org/646e/14fa0f734bfd8506a69422c122235fcfdff8.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/64/6e/646e14fa0f734bfd8506a69422c122235fcfdff8.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/brain/aws137"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> oup.com </button> </a>

Characterizing Resting-State Brain Function Using Arterial Spin Labeling

J. Jean Chen, Kay Jann, Danny J.J. Wang
<span title="">2015</span> <i title="Mary Ann Liebert Inc"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/v4t2k6us4zdn7imahrf7iujoiq" style="color: black;">Brain Connectivity</a> </i> &nbsp;
Following a brief technical description, we discuss the use of ASL in the following main categories: (1) resting-state functional connectivity (FC) measurement: the use of ASL-based cerebral blood flow  ...  This review addresses the use of ASL to assess brain function in the resting state.  ...  Acknowledgments The authors acknowledge the following sources of funding: Canadian Institutes of Health Research (App. 286286, J.J.C.), Natural Sciences and Engineering Research Council of Canada (App.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1089/brain.2015.0344">doi:10.1089/brain.2015.0344</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/26106930">pmid:26106930</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC4652156/">pmcid:PMC4652156</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/bcp4otgrcnabfn3iqkf72mlriq">fatcat:bcp4otgrcnabfn3iqkf72mlriq</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180724230445/https://cloudfront.escholarship.org/dist/prd/content/qt3hp9g3pv/qt3hp9g3pv.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/db/be/dbbe324b6cf50f796f2292b938217bfc7377317e.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1089/brain.2015.0344"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4652156" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

fMRI: preprocessing, classification and pattern recognition [article]

Maxim Sharaev, Alexander Andreev, Alexey Artemov, Alexander Bernstein, Evgeny Burnaev, Ekaterina Kondratyeva, Svetlana Sushchinskaya, Renat Akzhigitov
<span title="2018-04-26">2018</span> <i > arXiv </i> &nbsp; <span class="release-stage" >pre-print</span>
Systematic research into these mental disorders increasingly involves drawing clinical conclusions on the basis of data-driven approaches; to this end, structural and functional neuroimaging serve as key  ...  Identification of informative neuroimaging markers requires establishing a comprehensive preparation pipeline for data which may be severely corrupted by artifactual signal fluctuations.  ...  Acknowledgments This study was performed in the scope of the Project "Machine Learning and Pattern Recognition for the development of diagnostic and clinical prognostic prediction tools in psychiatry,  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/1804.10167v1">arXiv:1804.10167v1</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/sgy5bc7psrchzhm3e6uxqzwqym">fatcat:sgy5bc7psrchzhm3e6uxqzwqym</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200929160601/https://arxiv.org/pdf/1804.10167v1.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/da/24/da2455ae3be32441b16d5e82a2beda218bccba1e.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener" href="https://arxiv.org/abs/1804.10167v1" title="arxiv.org access"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> arxiv.org </button> </a>

Effects of Field-Map Distortion Correction on Resting State Functional Connectivity MRI

Hiroki Togo, Jaroslav Rokicki, Kenji Yoshinaga, Tatsuhiro Hisatsune, Hiroshi Matsuda, Nobuhiko Haga, Takashi Hanakawa
<span title="2017-12-01">2017</span> <i title="Frontiers Media SA"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/wrk3kouosrhcxiprcbguskdipu" style="color: black;">Frontiers in Neuroscience</a> </i> &nbsp;
Magnetic field inhomogeneities cause geometric distortions of echo planar images used for functional magnetic resonance imaging (fMRI).  ...  Independent component analysis followed by the dual regression approach was used for evaluation of resting-state functional connectivity networks (RSN).  ...  and Fishery (MAFF), the government of Japan, to HM and THi, and a Grant-in-Aid for Scientific Research on Innovative Areas (Memory Dynamism), from the Japan Society for the Promotion of Science, to THi  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3389/fnins.2017.00656">doi:10.3389/fnins.2017.00656</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/29249930">pmid:29249930</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC5717028/">pmcid:PMC5717028</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/h3h3md5rg5h5lcucxzjgg5ausm">fatcat:h3h3md5rg5h5lcucxzjgg5ausm</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190227023616/http://pdfs.semanticscholar.org/757e/df0b18cfab12ffff4b04c8fb3082d3de42ad.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/75/7e/757edf0b18cfab12ffff4b04c8fb3082d3de42ad.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3389/fnins.2017.00656"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> frontiersin.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5717028" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Resting-State Functional Connectivity in the Infant Brain: Methods, Pitfalls, and Potentiality

Chandler R. L. Mongerson, Russell W. Jennings, David Borsook, Lino Becerra, Dusica Bajic
<span title="2017-08-14">2017</span> <i title="Frontiers Media SA"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/nyffpqbfy5fvrl6y7b6b4gokh4" style="color: black;">Frontiers in Pediatrics</a> </i> &nbsp;
Resting-state Network Analysis techniques Standard methods used to analyze rs-fMRI data include independent component analysis (ICA) (38, 39) and seed-based correlation analysis (SCA) (7, 40).  ...  Despite distinct analytical approaches, both techniques result in identification of comparable RSNs (41).  ...  Keywords: blood oxygen level dependent, functional magnetic resonance imaging, independent component analysis, magnetic resonance imaging, resting-state functional magnetic resonance imaging, neurodevelopment  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3389/fped.2017.00159">doi:10.3389/fped.2017.00159</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/28856131">pmid:28856131</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC5557740/">pmcid:PMC5557740</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/lzs7kc32s5a6nnvxycgi6rhege">fatcat:lzs7kc32s5a6nnvxycgi6rhege</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190226194536/http://pdfs.semanticscholar.org/7652/a24aec3e32bb99f4a769eb53a26455fabc7d.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/76/52/7652a24aec3e32bb99f4a769eb53a26455fabc7d.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3389/fped.2017.00159"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> frontiersin.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5557740" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Stimulating brain tissue with bright light alters functional connectivity in brain at the resting state

Tuomo Starck, Juuso Nissilä, Antti Aunio, Ahmed Abou-Elseoud, Jukka Remes, Juha Nikkinen, Markku Timonen, Timo Takala, Osmo Tervonen, Vesa Kiviniemi
<span title="">2012</span> <i title="Scientific Research Publishing, Inc,"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/z4x7g4smcjc7dfhpj7wqejn7d4" style="color: black;">World Journal of Neuroscience</a> </i> &nbsp;
In order to investigate a short term response, functional connectivity changes of the brain were studied in the resting state with functional magnetic resonance imaging during bright light stimulus via  ...  Hypothetical phototransduction signal pathways leading to responses in brain function are discussed as well as some observed effects and their possible link to the findings.  ...  Nick Hayward of Scientific English, United Kingdom, is thanked for swift English proofreading.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.4236/wjns.2012.22012">doi:10.4236/wjns.2012.22012</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/2zs5g6a5kffnniiid5sb6uvqqe">fatcat:2zs5g6a5kffnniiid5sb6uvqqe</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20140728022557/http://www.scirp.org/journal/PaperDownload.aspx?paperID=19417" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/89/40/894015e267348cf64341f37187b4d8087e3f8798.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.4236/wjns.2012.22012"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> Publisher / doi.org </button> </a>
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