A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2017; you can also visit the original URL.
The file type is application/pdf.
Filters
High-throughput SNP genotyping by single-tube PCR with Tm-shift primers
2005
BioTechniques
Preserved Fulltext
Most recently, several highly multiplexed and ultra-high-throughput genotyping systems have become generally available (22) (23) (24) . ...
Despite many recent advances in high-throughput single nucleotide polymorphism (SNP) genotyping technologies, there is still a great need for inexpensive and flexible methods with a reasonable throughput ...
doi:10.2144/000112028
pmid:16382908
fatcat:37wwefztcba27mmzutmztpfuzu
High-throughput profiling and analysis of plant responses over time to abiotic stress
2017
Plant Direct
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2018; you can also visit the original URL.
The file type is application/pdf.
Additionally, ionomic profiling was conducted as an independent, low-cost, and high-throughput option for characterizing G x E, identifying the elements most affected by either genotype or treatment and ...
We subjected a panel of 30 genetically diverse sorghum genotypes to a spectrum of nitrogen deprivation and measured responses using high-throughput phenotyping technology followed by ionomic profiling. ...
Genotypes that displayed greater than average (blue) or less than average (magenta) growth are indicated. Error bars: 95% con dence intervals for both graphs. ...
doi:10.1002/pld3.23
pmid:31245669
pmcid:PMC6508565
fatcat:od2jczde2rdk7lidpcih6lgupa
High-throughput profiling and analysis of plant responses over time to abiotic stress
[article]
2017
bioRxiv
pre-print
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2019; you can also visit the original URL.
The file type is application/pdf.
Additionally, ionomic profiling was conducted as an independent, low cost and high throughput option for characterizing G x E, identifying the elements most affected by either genotype or treatment and ...
We subjected a panel of 30 genetically diverse sorghum genotypes to a spectrum of nitrogen deprivation and measured responses using high-throughput phenotyping technology followed by ionomic profiling. ...
Genotypes that displayed greater than average (blue) or less than average (magenta) growth are indicated. Error bars: 95% con dence intervals for both graphs. ...
doi:10.1101/132787
fatcat:kc7ts23drng2fcljc734c7wpja
Optimization problems in dotted interval graphs
2014
Discrete Applied Mathematics
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2017; you can also visit the original URL.
The file type is application/pdf.
The class of D-dotted interval (D-DI) graphs is the class of intersection graphs of arithmetic progressions with jump (common difference) at most D. ...
Our algorithms are based on classical results in algorithmic graph theory and new structural properties of D-DI graphs that may be of independent interest. ...
[2] in the context of high throughput genotyping. They used dotted intervals to model microsatellite polymorphisms which are used in a genotyping technique called microsatellite genotyping. ...
doi:10.1016/j.dam.2014.04.014
fatcat:xsvkydhd7zhtdopiw67bzidwjy
Deploying QTL-seq for rapid delineation of a potential candidate gene underlying major trait-associated QTL in chickpea
2015
DNA Research
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2018; you can also visit the original URL.
The file type is application/pdf.
high seed weight mapping parents and homozygous individuals during seed development. ...
The use of QTL-seq and classical QTL mapping in combination narrowed down the 1.37 Mb (comprising 177 genes) major SW QTL (CaqSW1.1) region into a 35 kb genomic interval on desi chickpea chromosome 1 containing ...
Acknowledgements We are thankful to the Editor and referees for critically evaluating the manuscript and providing constructive comments. ...
doi:10.1093/dnares/dsv004
pmid:25922536
pmcid:PMC4463844
fatcat:jtuupwmobfa75ols26umta2ldi
Optimization Problems in Dotted Interval Graphs
[chapter]
2012
Lecture Notes in Computer Science
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2017; you can also visit the original URL.
The file type is application/pdf.
The class of D-dotted interval (D-DI) graphs is the class of intersection graphs of arithmetic progressions with jump (common difference) at most D. ...
Our algorithms are based on classical results in algorithmic graph theory and new structural properties of D-DI graphs that may be of independent interest. ...
[2] in the context of high throughput genotyping. They used dotted intervals to model microsatellite polymorphisms which are used in a genotyping technique called microsatellite genotyping. ...
doi:10.1007/978-3-642-34611-8_8
fatcat:cllmwbmtlzbr5lbcwjcre6m2vi
Epithelial-Myeloid cell crosstalk regulates acinar cell plasticity and pancreatic remodeling in mice
2017
eLife
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2019; you can also visit the original URL.
The file type is application/pdf.
Thus, the cross-talk between epithelial cells and infiltrating myeloid cells determines the balance between tissue repair and carcinogenesis in the pancreas. ...
Myeloid cells infiltrate the pancreas during the onset of pancreatic cancer, and promote carcinogenesis. ...
is registered in the UK with company number FC030576 and branch number BR015634 at the address 1st Floor, 24 Hills Road, Cambridge CB2 1JP | August 2014 3 • High-throughput sequence data should be uploaded ...
doi:10.7554/elife.27388
pmid:28980940
pmcid:PMC5690281
fatcat:utc2csukcfg3rhphhlakgdro64
Physical mapping and InDel marker development for the restorer gene Rf2 in cytoplasmic male sterile CMS-D8 cotton
2021
BMC Genomics
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2021; you can also visit the original URL.
The file type is application/pdf.
BSA resequencing technology, high-throughput SNP genotyping, and InDel markers were used to identify Rf2 locus on candidate interval of 1.48 Mb on chromosome D05. ...
The selection of 24 single nucleotide polymorphisms (SNP) through high-throughput genotyping and the development insertion and deletion (InDel) markers were conducted to narrow down the candidate interval ...
JJF, XXZ, and MZ performed the fertility survey, data analysis and qRT-PCR. JJF and JYW contributed to the preparation of the manuscript. All authors read and approved the final manuscript. ...
doi:10.1186/s12864-020-07342-y
pmid:33407111
pmcid:PMC7789476
fatcat:622mcfdkejcm5aq6nc6yxyrww4
Comparative quantitative trait loci for silique length and seed weight in Brassica napus
2015
Scientific Reports
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2019; you can also visit the original URL.
The file type is application/pdf.
With the rapid development of next-generation sequencing (NGS) technologies, some new strategies were proposed to take advantages of the power of high-throughput genotyping, e.g. ...
By high density selective genotyping of DH lines with extreme phenotypes, using a Brassica single-nucleotide polymorphism (SNP) array, the QTL on chromosome A09 was narrowed, and aligned into 1.14-Mb region ...
(2014BAD01B07), NSFC (31471529, 31401455, 31301351) and cstc (2014yykfA80008). ...
doi:10.1038/srep14407
pmid:26394547
pmcid:PMC4585775
fatcat:i3buopopyzffhldz3eq6e5lujq
High-throughput pedigree drawing
2005
European Journal of Human Genetics
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2020; you can also visit the original URL.
The file type is application/pdf.
Family trees have long been a valuable visual tool for geneticists in identifying clusters of inherited traits and genotypes. ...
As more data are collected, drawing the graphs by hand becomes impractical and, for this reason, we have developed the pedigree software CraneFoot. ...
The second category was covered by Tores and Barillot, 4 who presented an interval graph interpretation of perfectly drawable pedigrees. ...
doi:10.1038/sj.ejhg.5201430
pmid:15870825
fatcat:kz34qqgbrjbp5bc6d4rx6gkpta
Highly-multiplexed SNP genotyping for genetic mapping and germplasm diversity studies in pea
2010
BMC Genomics
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2020; you can also visit the original URL.
The file type is application/pdf.
Conclusion: Our results show that the Illumina GoldenGate assay can be used successfully for high-throughput SNP genotyping of diverse germplasm in pea. ...
This genotyping approach will simplify genotyping procedures for association mapping or diversity studies purposes and open new perspectives in legume genomics. ...
Rond and H. Houtin in the development of the 'China' X 'Cameor' population. We warmly thank V. Fontaine and C.Rameau for sharing sequence data with us and D. ...
doi:10.1186/1471-2164-11-468
pmid:20701750
pmcid:PMC3091664
fatcat:e7v3bnm7h5evbekaz5fpisx6uq
QTL Mapping for Gummy Stem Blight Resistance in Watermelon (Citrullus spp.)
2021
Plants
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2021; you can also visit the original URL.
The file type is application/pdf.
High-throughput markers were developed and validated for the selection of resistant QTLs using watermelon accessions, and commercial cultivars. ...
LL and SB traits, respectively. ...
Francisco, CA, USA) high-throughput (HT) genotyping platform. ...
doi:10.3390/plants10030500
pmid:33800297
fatcat:q6mh2hcftfczzfor3hy4qldx5i
Analysis of Population Genetic Diversity of CynoglossusSemilaevis in Three Groups from Northern China Sea
2018
IOP Conference Series: Earth and Environment
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2019; you can also visit the original URL.
The file type is application/pdf.
Two dimensional clustering results show that a small part of the region in Tianjin wild population had a small intervals with that of Tianjin cultured population, but the two principal components generally ...
Principal component analysis was carried out by using software GCTA, and PCA showed that the contribution rates of the first two principal components PC1 and PC2 were 16.25% and 9.54%, respectively, and ...
Through genome-wide high-throughput SNP screening and genotyping analysis, SNPs can be found for the genetic diversity analysis of population ( [6] ) The principal component analysis found that the genetic ...
doi:10.1088/1755-1315/178/1/012048
fatcat:j4xvvrwvgbhirclrxod66m6v4i
ScreenSeed as a novel high throughput seed germination phenotyping method
2021
Scientific Reports
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2021; you can also visit the original URL.
The file type is application/pdf.
AbstractA high throughput phenotyping tool for seed germination, the ScreenSeed technology, was developed with the aim of screening genotype responsiveness and chemical drugs. ...
This technology was presently used with Arabidopsis thaliana seeds to allow characterizing seed samples germination behavior by incubating seeds in 96-well microplates under defined conditions and detecting ...
made the partnership with GEVES (the French Variety and Seed Study and Control Group; Beaucouzé, France) possible. ...
doi:10.1038/s41598-020-79115-2
pmid:33446694
fatcat:vedqlnsrnfdujgyj2sdg653oe4
Dynamic plant height QTL revealed in maize through remote sensing phenotyping using a high-throughput unmanned aerial vehicle (UAV)
2019
Scientific Reports
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2019; you can also visit the original URL.
The file type is application/pdf.
We investigated the PH of diverse maize inbred lines (117 temperate lines, 135 tropical lines) at four growth stages using unmanned aerial vehicle high-throughput phenotypic platforms (UAV-HTPPs). ...
Based on gene annotations and expression profiles, we identified candidate genes controlling PH. The PH data collected by the UAV-HTPPs were credible and the genetic mapping power was high. ...
Figure 1 . 1 Field high-throughput phenotyping for plant height. (A) Digitally designed graphs depicting maize plants at four growth stages. Graphs were constructed using PlantCAD-maize software. ...
doi:10.1038/s41598-019-39448-z
pmid:30837510
pmcid:PMC6401315
fatcat:4y5cpxhptjhnpmen5z6pbrkebq
« Previous
Showing results 1 — 15 out of 3,192 results