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Digitization and search: A non-traditional use of HPC

Liana Diesendruck, Luigi Marini, Rob Kooper, Mayank Kejriwal, Kenton McHenry
2012 2012 IEEE 8th International Conference on E-Science  
Automated search of handwritten content is a highly interesting and applicative subject, especially important today due to the public availability of large digitized document collections.  ...  The proposed framework can be used to provide an alternative to costly manual transcriptions for a variety of digitized paper archives.  ...  This work used the Extreme Science and Engineering Discovery Environment (XSEDE), which is supported by National Science Foundation grant number OCI-1053575.  ... 
doi:10.1109/escience.2012.6404445 dblp:conf/eScience/DiesendruckMKKM12a fatcat:57encw32qjdqxjxv6w4ceww2yu

Enabling complex analysis of large-scale digital collections: humanities research, high-performance computing, and transforming access to British Library digital collections

Melissa Terras, James Baker, James Hetherington, David Beavan, Martin Zaltz Austwick, Anne Welsh, Helen O'Neill, Will Finley, Oliver Duke-Williams, Adam Farquhar
2017 Digital Scholarship in the Humanities  
Using institutional data-processing frameworks routinely used to support scientific research, we assisted four humanities researchers in analysing 60,000 digitized books, and we present two resulting case  ...  This research allowed us to identify infrastructural and procedural barriers and make recommendations on resource allocation to best support non-computational researchers in undertaking 'big data' research  ...  Acknowledgements This project was funded by a pilot grant from the Jisc Research Data Spring (JISC 3548) between April and July 2015.  ... 
doi:10.1093/llc/fqx020 dblp:journals/lalc/TerrasBHBAWOFDF18 fatcat:7z4grepupjeq7nfwnniwrkb4ve

Current Challenges and Future Research Areas for Digital Forensic Investigation [article]

David Lillis, Brett Becker, Tadhg O'Sullivan, Mark Scanlon
2016 arXiv   pre-print
This paper explores the current challenges contributing to the backlog in digital forensics from a technical standpoint and outlines a number of future research topics that could greatly contribute to  ...  The variety of new digital evidence sources pose new and challenging problems for the digital investigator from an identification, acquisition, storage and analysis perspective.  ...  Traditional HPC techniques normally exploit some level of parallelism, and to date have been underexploited by the digital forensic community.  ... 
arXiv:1604.03850v1 fatcat:svi7m66twvg3vgfop4qjbuauja

Donor Registries and Search Strategies [chapter]

Carolyn K. Hurley, Machteld Oudshoorn, Michelle Setterholm
2012 Msphere  
This chapter describes the strategies aimed at identifying such a matched donor from registries of volunteers or from umbilical cord blood banks.  ...  The optimal donor of hematopoietic progenitor cells shares alleles of the major histocompatibility genes with the recipient.  ...  An allele is defined as a unique nucleotide sequence for a gene as defined by the use of all of the digits in a current allele name.  ... 
doi:10.1007/978-1-61779-842-9_30 pmid:22665254 pmcid:PMC3612349 fatcat:fnwzktfnofeunm5ga3f6vrso6y

Where Is the Age of Digitalization Heading? The Meaning, Characteristics and Implications of Contemporary Digital Transformation

Seunghyun Kim, Byungchul Choi, Yongkyu Lew
2021 Sustainability  
This is ultimately a matter of how firms survive and maintain sustainable growth in this great upheaval of digital transformation.  ...  The findings show that digital transformation involves a change of firms based on constant innovation, not simply the acceptance of technology, and that there is a large digital divide that depends on  ...  Conflicts of Interest: The authors declare no conflict of interest.  ... 
doi:10.3390/su13168909 fatcat:huib4tfxevbcnaf4ca3mokvfse

Cloud architecture for digital phenotyping and automation

Olivier Debauche, Said Mahmoudi, Pierre Manneback, Mathieu Massinon, Nassima Tadrist, Frederic Lebeau, Sidi Ahmed Mahmoudi
2017 2017 3rd International Conference of Cloud Computing Technologies and Applications (CloudTech)  
However, the number of images and parameters used to store and treat these parameters are continuously growing.  ...  The present application platform allows to use several frameworks with a fine-grained resource use of the cluster.  ...  INTRODUCTION Digital phenotyping (DP) is a combination of novel technologies: non-destructive imaging (thermal infrared, fluorescence, 3D and tomographic imaging) [1] , spectroscopy (multispectral and  ... 
doi:10.1109/cloudtech.2017.8284718 fatcat:lyjeugqvlnaadkvo2wpslcya6y

Hybrid analysis and modeling, eclecticism, and multifidelity computing toward digital twin revolution [article]

Omer San, Adil Rasheed, Trond Kvamsdal
2021 arXiv   pre-print
Recently, a third approach which is a combination of these deterministic and statistical models is emerging for scientific applications.  ...  Addressing these challenges could enable the revolution of digital twin technologies for scientific and engineering applications.  ...  ACKNOWLEDGMENTS Conflict of interest The authors declare no potential conflict of interests.  ... 
arXiv:2103.14629v1 fatcat:rwk4ljq4irf6ziam6rc2vw27ra

Overview of Additive Manufacturing Informatics: "A Digital Thread"

Deborah Mies, Will Marsden, Stephen Warde
2016 Integrating Materials and Manufacturing Innovation  
The phrase, "Digital Thread," is commonly used to describe this process.  ...  Success requires that data be made available to integrated discovery, data mining, and physics-based simulation tools, enabling timely evaluation of manufactured parts and ensuring a fluid response to  ...  Acknowledgements The authors wish to thank Stuart Dyer and Dr. James Goddin for providing background materials and informative discussions.  ... 
doi:10.1186/s40192-016-0050-7 fatcat:4bsd5jgm3rbq5jkwh4cj7cfm54

Search-based software engineering

Mark Harman, S. Afshin Mansouri, Yuanyuan Zhang
2012 ACM Computing Surveys  
For each, it lists the papers, drawing out common themes, such as the type of search technique used, the fitness definitions and the nature of evaluation.  ...  Permission to make digital or hard copies of part or all of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage  ...  A:59  ... 
doi:10.1145/2379776.2379787 fatcat:m4elb2acwvfdjaifqdcjftgksq

Big Data and cloud computing: innovation opportunities and challenges

Chaowei Yang, Qunying Huang, Zhenlong Li, Kai Liu, Fei Hu
2016 International Journal of Digital Earth  
cloud computing and processing Big Data; (v) open availability of Big Data and processing capability pose social challenges of geospatial significance and (vi) a weave of innovations is transforming Big  ...  Big Data has emerged in the past few years as a new paradigm providing abundant data and opportunities to improve and/or enable research and decision-support applications with unprecedented value for digital  ...  Acknowledgements We thank the anonymous reviewers for their insightful comments and reviews. Dr George Taylor reviewed a previous version of this manuscript.  ... 
doi:10.1080/17538947.2016.1239771 fatcat:qbcgqj2pcvbgja6dnnakoj2saa

Digital Visual Exploration Library

Nicholas Tan Jerome, Andreas Kopmann
2018 Proceedings of the 13th International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications  
of the growing data within a digital library.  ...  In this paper, we present a concept of Digital Visual Exploration Library (DVEL) based on the confluence of two major research domains-digital library and visualisation-that enables efficient browsing  ...  ACKNOWLEDGEMENT We would like to thank the German Federal Ministry of Education and Research for funding of ASTOR and NOVA (grants 05K13VK5 and 05K16VKB, respectively).  ... 
doi:10.5220/0006650003410348 dblp:conf/grapp/JeromeK18 fatcat:rkeuzfhtzfcyhadhku3qrvkpzq

Enabling Rapid Development of Parallel Tree Search Applications [article]

Jeffrey P. Gardner, Andrew Connolly, Cameron McBride
2007 arXiv   pre-print
We have therefore built a library, called Ntropy, that provides a flexible, extensible, and easy-to-use way of developing tree-based data analysis algorithms for both serial and parallel platforms.  ...  Nearly all efficient analyses of large astronomical datasets use trees as their fundamental data structure.  ...  Acknowledgments This work was funded by the NASA Advanced Information Systems Research Program grant NNG05GA60G and was facilitated through an allocation of advanced NSF-supported computing resources by  ... 
arXiv:0709.1967v1 fatcat:ovpd554rmzesrfru7kxr6xruoy

EOSC-hub D9.4 Joint Digital Innovation Hub Final Results and Sustainability Plan

Sy Holsinger
2021 Zenodo  
This document provides a detailed report of the EOSC Digital Innovation Hub (EOSC DIH) supported by EOSC-hub WP9, including all activities carried out in the different tasks, the main results achieved  ...  CINECA • Scope: National • Country: Italy • Sector: HPC and cloud computing • Web: http://www.cineca.it • Description: CINECA is a non-profit Consortium, made up of 67 Universities, 9 1 . 1 DIHNET  ...  Erasmus Play aims to avoid home searching as a burden for student, young professional and digital nomads' mobility.  ... 
doi:10.5281/zenodo.5033322 fatcat:omxcto6z4vfu3pfamq5p6xetz4

Digital Twin: Values, Challenges and Enablers [article]

Adil Rasheed, Omer San, Trond Kvamsdal
2019 arXiv   pre-print
A digital twin can be defined as an adaptive model of a complex physical system.  ...  In this work, we review the recent status of methodologies and techniques related to the construction of digital twins.  ...  ACKNOWLEDGMENT The authors would like to thank Professor Harald Martens for his helpful comments and suggestions on an earlier draft of this manuscript.  ... 
arXiv:1910.01719v1 fatcat:3r2bbivffbeizelake7oo3xgbm

State-of-the-Art in Smith–Waterman Protein Database Search on HPC Platforms [chapter]

Enzo Rucci, Carlos García, Guillermo Botella, Armando De Giusti, Marcelo Naiouf, Manuel Prieto-Matías
2016 Big Data Analytics in Genomics  
Searching biological sequence database is a common and repeated task in bioinformatics and molecular biology. The Smith-Waterman algorithm is the most accurate method for this kind of search.  ...  We give a survey of the state-of-the-art in Smith-Waterman protein database search, focusing on four hardware architectures: central processing units, graphics processing units, field programmable gate  ...  Acknowledgements Enzo Rucci holds a PhD CONICET Fellowship from the Argentinian Government, and this work has been partially supported by Spanish research project TIN 2012-32180.  ... 
doi:10.1007/978-3-319-41279-5_6 fatcat:7ua4bsherbc6pfi2ud2tzu6say
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