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Detecting Positive Medical History Mentions

Bing Bai, Pierre-Francois Laquerre, Richard Jackson, Robert Stewart
<span title="">2017</span> <i title="ACM Press"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/ibcfmixrofb3piydwg5wvir3t4" style="color: black;">Proceedings of the 40th International ACM SIGIR Conference on Research and Development in Information Retrieval - SIGIR &#39;17</a> </i> &nbsp;
More speci cally, we rst extracted medical conditions mentioned using a rule-based system and a medical gaze eer, then we classied whether such mentions re ected the patient's history or not.  ...  In medical practice, knowing the medical history of a patient is crucial for diagnosis and treatment suggestion.  ...  For asthma, most mentions are positive. On the other hand, most mentions of strokes are about family history rather than about the patient.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1145/3077136.3080717">doi:10.1145/3077136.3080717</a> <a target="_blank" rel="external noopener" href="https://dblp.org/rec/conf/sigir/BaiLJS17.html">dblp:conf/sigir/BaiLJS17</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/vpnrx3i6jzhlbg2fux2ha7snlq">fatcat:vpnrx3i6jzhlbg2fux2ha7snlq</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190218135802/https://static.aminer.org/pdf/20170130/pdfs/sigir/jvpk9q3eb0ttizw2fmxudg5ehm6fykrl.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/d2/1e/d21e619e7d9d9445d70aa07f5d7a2e94c16ea901.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1145/3077136.3080717"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> acm.org </button> </a>

Combining glass box and black box evaluations in the identification of heart disease risk factors and their temporal relations from clinical records

Cyril Grouin, Véronique Moriceau, Pierre Zweigenbaum
<span title="2015-07-02">2015</span> <i title="Elsevier BV"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/p4kk6lusgrhyxecgig72iasi5q" style="color: black;">Journal of Biomedical Informatics</a> </i> &nbsp;
This evaluation method enabled us to identify the risk factor detection component as most contributing to the false negatives and false positives of the global system.  ...  This led us to redirect further effort to this component, focusing on medication detection, with gains of 7 to 20 recall points and of 3 to 6 F-measure points depending on the corpus and evaluation.  ...  A frequent cause of false positives is the mention of medications in the Allergy section. We therefore stipulated that medications detected in this section would not be sent to the system output.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.jbi.2015.06.014">doi:10.1016/j.jbi.2015.06.014</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/26142870">pmid:26142870</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC4976127/">pmcid:PMC4976127</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/5b25kyl4jbbsnoq7hsj5yvqbza">fatcat:5b25kyl4jbbsnoq7hsj5yvqbza</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200507060647/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC4976127&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/c4/45/c445dfa6419b8b60b38f372a08827f312d5efcdb.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.jbi.2015.06.014"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> elsevier.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4976127" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Automatic Genetic Risk Assessment Calculation Using Breast Cancer Family History Data from the EHR compared to Self-Report

Margaret Sin, Julia E McGuinness, Meghna S Trivedi, Alejandro Vanegas, Thomas B Silverman, Katherine D Crew, Rita Kukafka
<span title="2018-12-05">2018</span> <i title="American Medical Informatics Association"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/g6q27b56yzeupjryv6lby2r2pa" style="color: black;">AMIA Annual Symposium Proceedings</a> </i> &nbsp;
We automated the calculation of the SPS score using structured family history data along with free text from the electronic health record (EHR) to detect detailed family history information of breast cancer  ...  We extracted data for all women aged 35 to 74 who had screening mammography at Columbia University Medical Center (CUMC) from January 2015 to May 2017 (N=37,596).  ...  We detected 319 out of 1,398 patients who had a positive family history of breast cancer (Table 3 ).  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/30815140">pmid:30815140</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC6371348/">pmcid:PMC6371348</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/du6kw5232bfztlej47j2vhpedm">fatcat:du6kw5232bfztlej47j2vhpedm</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200209214127/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC6371348&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/66/60/66607900581185782f2bbd4cf0ab78f08fd5407f.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6371348" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Modeling drug exposure data in electronic medical records: an application to warfarin

Mei Liu, Min Jiang, Vivian K Kawai, Charles M Stein, Dan M Roden, Joshua C Denny, Hua Xu
<span title="2011-10-22">2011</span> <i title="American Medical Informatics Association"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/g6q27b56yzeupjryv6lby2r2pa" style="color: black;">AMIA Annual Symposium Proceedings</a> </i> &nbsp;
Our framework consists of three phases: 1) drug entity recognition - identifying drug mentions; 2) drug event detection - labeling drug mentions with a status (e.g., "on" or "stop"); and 3) drug exposure  ...  Identification of patients' drug exposure information is critical to drug-related research that is based on electronic medical records (EMRs).  ...  The datasets used were obtained from Vanderbilt University Medical Center's Synthetic Derivative which is supported by institutional funding and by the Vanderbilt CTSA grant 1UL1RR024975-01 from NCRR/NIH  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/22195139">pmid:22195139</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC3243123/">pmcid:PMC3243123</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/p5j2dr3wy5gdxp3b223vt53swu">fatcat:p5j2dr3wy5gdxp3b223vt53swu</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20191127035513/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC3243123&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/6e/35/6e35a20f000d1297e7af3774ac0bfbce850ca395.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3243123" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Adapting existing natural language processing resources for cardiovascular risk factors identification in clinical notes

Abdulrahman Khalifa, Stéphane Meystre
<span title="2015-08-28">2015</span> <i title="Elsevier BV"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/p4kk6lusgrhyxecgig72iasi5q" style="color: black;">Journal of Biomedical Informatics</a> </i> &nbsp;
In addition, the task involved detecting medications, and time information associated with the extracted data.  ...  application main components were adapted from two existing NLP tools implemented in the Apache UIMA framework: Textractor (for dictionary-based lookup) and cTAKES (for preprocessing and smoking status detection  ...  Family history of CAD was detected by modifying the contextual analysis of the detected CAD mentions using ConText's 'experiencer' analysis.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.jbi.2015.08.002">doi:10.1016/j.jbi.2015.08.002</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/26318122">pmid:26318122</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC4983192/">pmcid:PMC4983192</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/5ae66zallvfrbln4x4nf6ycmua">fatcat:5ae66zallvfrbln4x4nf6ycmua</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200208121857/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC4983192&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/a6/ce/a6cec024104feee2fbc9e8f4c8cb3f6e34fef8e2.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1016/j.jbi.2015.08.002"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> elsevier.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4983192" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Automation of a problem list using natural language processing

Stephane Meystre, Peter J Haug
<span title="2005-08-31">2005</span> <i title="Springer Nature"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/bnylrk2y7bfnrn7u2f2vjkx7ta" style="color: black;">BMC Medical Informatics and Decision Making</a> </i> &nbsp;
The initial evaluation of the section and sentence detection algorithms demonstrated a sensitivity and positive predictive value of 100% when detecting sections, and a sensitivity of 89% and a positive  ...  The medical problem list is an important part of the electronic medical record in development in our institution.  ...  "the patient has asthma"; "past history positive for asthma"; "pulmonary edema is probable"), and considered absent if negated in the text or not mentioned at all (e.g. "this test excluded diabetes...  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/1472-6947-5-30">doi:10.1186/1472-6947-5-30</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/16135244">pmid:16135244</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC1208893/">pmcid:PMC1208893</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/um6lpwhjpbaflnuxlr2x7vvi4u">fatcat:um6lpwhjpbaflnuxlr2x7vvi4u</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20191127003120/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC1208893&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/4d/03/4d03e175ec67e51030a0337c579fd81ab656d436.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/1472-6947-5-30"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> springer.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1208893" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

Coreference analysis in clinical notes: a multi-pass sieve with alternate anaphora resolution modules

Siddhartha Reddy Jonnalagadda, Dingcheng Li, Sunghwan Sohn, Stephen Tze-Inn Wu, Kavishwar Wagholikar, Manabu Torii, Hongfang Liu
<span title="">2012</span> <i title="Oxford University Press (OUP)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/aapnwtybrvghlc35hfimbtdlom" style="color: black;">JAMIA Journal of the American Medical Informatics Association</a> </i> &nbsp;
For instance, mentions of a problem or treatment could be related to different persons because of the information recorded in the 'family medical history' section.  ...  Clinical notes are often divided into sections, or segments, such as 'history of present illness' or 'past medical history.' Those sections can be helpful in identifying coreferred pairs.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1136/amiajnl-2011-000766">doi:10.1136/amiajnl-2011-000766</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/22707745">pmid:22707745</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC3422831/">pmcid:PMC3422831</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/w5pxqalpn5eb3jzlqthogefjem">fatcat:w5pxqalpn5eb3jzlqthogefjem</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200428083622/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC3422831&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/9e/02/9e025d3580699d45714725bd1ef670efe9fa5bf5.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1136/amiajnl-2011-000766"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3422831" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

A Study on the Prevalence of Chlamydia Trachomatis and Neisseria Gonorrhoeae Infections Using Polymerase Chain Reaction

<span title="2016-04-05">2016</span> <i title="International Journal of Science and Research"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/odv46yibm5gf7evzoopmrrqr3q" style="color: black;">International Journal of Science and Research (IJSR)</a> </i> &nbsp;
Demographic data and the medical history of patients were obtained by direct interview; however, the mean age of cases was 33.8±9.06.  ...  In DFA technique, 5 cases (3.8%) were positive and 3 (2.3%) were suspicious, while in the PCR technique, 6 cases (4.6%) were positive for C. trachomatis.  ...  Chlamydia detection findings of PCR and DFA in the present study are similar to the ones of the previously mentioned studies but in this study, PCR results showed that there were no positive results in  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.21275/v5i4.nov162761">doi:10.21275/v5i4.nov162761</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/p3mzrphxxbgv7fjkdmg5x5lxzm">fatcat:p3mzrphxxbgv7fjkdmg5x5lxzm</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20170706152045/https://www.ajol.info/index.php/ajb/article/download/94651/84023/" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/88/53/8853149dc45730d8766b700a1f25839d5281560c.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.21275/v5i4.nov162761"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

Detecting rare diseases in electronic health records using machine learning and knowledge engineering: Case study of acute hepatic porphyria

Aaron M. Cohen, Steven Chamberlin, Thomas Deloughery, Michelle Nguyen, Steven Bedrick, Stephen Meninger, John J. Ko, Jigar J. Amin, Alex J. Wei, William Hersh, Sreeram V. Ramagopalan
<span title="2020-07-02">2020</span> <i title="Public Library of Science (PLoS)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/s3gm7274mfe6fcs7e3jterqlri" style="color: black;">PLoS ONE</a> </i> &nbsp;
We used an extract of the complete EHR data of 200,000 patients from an academic medical center and enriched it with records from an additional 5,571 patients containing any mention of porphyria in the  ...  One such rare disease that may be amenable to EHR-based detection is acute hepatic porphyria (AHP).  ...  Patients in the group without mention of porphyria in the medical record generally had much longer and more complicated histories compared to the other group, with 86 out of 100 having encounters spread  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1371/journal.pone.0235574">doi:10.1371/journal.pone.0235574</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/32614911">pmid:32614911</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/cukosplkwvedzbi6erjqxyblta">fatcat:cukosplkwvedzbi6erjqxyblta</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20200709144432/https://journals.plos.org/plosone/article/file?id=10.1371%2Fjournal.pone.0235574&amp;type=printable" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/31/1e/311ed24cb485d155a3542ed83f6fb1fd409cfd2b.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1371/journal.pone.0235574"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> plos.org </button> </a>

End-to-End Extraction of Family History Information from Clinical Notes Using Deep Learning and Heuristics (Preprint)

João Figueira Silva, João Rafael Almeida, Sérgio Matos
<span title="2020-08-07">2020</span> <i title="JMIR Publications Inc."> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/pk2zkxee3bdcvm3ettcuv2cwf4" style="color: black;">JMIR Medical Informatics</a> </i> &nbsp;
mentions but also on the extraction of relations between the identified entities.  ...  This includes family history, which is highly relevant for applications such as diagnosis and prognosis.  ...  problems, and their associations, and discovered (1) considerable compliance between positive and negative medical issues mentioned in the reports considering the diagnosis and family history and (2)  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.2196/22898">doi:10.2196/22898</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/33372893">pmid:33372893</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/jp6ifgucang6ricqfjavijiixy">fatcat:jp6ifgucang6ricqfjavijiixy</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20210304145304/https://medinform.jmir.org/2020/12/e22898/PDF" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/64/ca/64ca7edef305d711c77cb0ad32f814681f30a00a.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.2196/22898"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> Publisher / doi.org </button> </a>

GRACE: Generating Summary Reports Automatically for Cognitive Assistance in Emergency Response

M Arif Rahman, Sarah M. Preum, Ronald Williams, Homa Alemzadeh, John A. Stankovic
<span title="2020-04-03">2020</span> <i title="Association for the Advancement of Artificial Intelligence (AAAI)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/wtjcymhabjantmdtuptkk62mlq" style="color: black;">PROCEEDINGS OF THE THIRTIETH AAAI CONFERENCE ON ARTIFICIAL INTELLIGENCE AND THE TWENTY-EIGHTH INNOVATIVE APPLICATIONS OF ARTIFICIAL INTELLIGENCE CONFERENCE</a> </i> &nbsp;
EMS (emergency medical service) plays an important role in saving lives in emergency and accident situations.  ...  Chief Complaint, HPI (History of Present Illness), and PMH (Past Medical History).  ...  History of Present Illness (HPI) and Past Medical History (PMH) History of present illness (HPI) and past medical history (PMH) are very important information to understand patients' condition and the  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1609/aaai.v34i08.7049">doi:10.1609/aaai.v34i08.7049</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/ynzihy3kczdv7genhny4ojcj5i">fatcat:ynzihy3kczdv7genhny4ojcj5i</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20201104144023/https://aaai.org/ojs/index.php/AAAI/article/download/7049/6903" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/a7/16/a716445d221f5b44668325fda23edad0ecd67e1e.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1609/aaai.v34i08.7049"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

Primary Penile Kaposi Sarcoma in an HIV-negative 21-year-old Male

Sophie Momen, Cathy Corbishley, Ruth Pettengell, Ben Ayres, Jens Samol
<span title="">2014</span> <i title="Touch Digital Media, Ltd."> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/5dlbck6y5jbmvg2ah2xwqlwjdy" style="color: black;">European Oncology &amp; Haematology</a> </i> &nbsp;
This is the first case of a heterosexual teenage and young adult (TYA) patient diagnosed with a primary penile KS without a history of sexual intercourse.  ...  We present a 21-year-old HIV-negative Somalian male who was diagnosed with an immunohistochemically proven human herpes virus 8 (HHV8)-positive primary penile Karposi's Sarcoma (KS).  ...  In addition, the patient mentioned a 1-year history of intermittent night sweats. His past medical history included a circumcision at birth and hay fever. He denied any previous sexual activity.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.17925/eoh.2014.10.2.2">doi:10.17925/eoh.2014.10.2.2</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/skh7yu3w3rbtjlzaq5pzicfpl4">fatcat:skh7yu3w3rbtjlzaq5pzicfpl4</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180721075332/http://www.touchoncology.com/system/files/private/articles/21632/pdf/Samol_ePub.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/0f/57/0f574aaa3e3780a212d5497a29e50d567b71acdd.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.17925/eoh.2014.10.2.2"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

The Role of a Deep-Learning Method for Negation Detection in Patient Cohort Identification from Electroencephalography Reports

Stuart J Taylor, Sanda M Harabagiu
<span title="2018-12-05">2018</span> <i title="American Medical Informatics Association"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/g6q27b56yzeupjryv6lby2r2pa" style="color: black;">AMIA Annual Symposium Proceedings</a> </i> &nbsp;
When medical concepts or terms are identified within the scope of a negation cue, their polarity is inferred as "negative". All the other concepts or words receive a positive polarity.  ...  Our experiments indicate that the neural negation detection method produces better patient cohorts then the polarity recognition method.  ...  "electrographic" "seizures"] is labels with the sequence [O, O, O, O, O, O, O, C, I, I, I, I, I, I Figure 1 : 1 medical problems, (4) medical treatments and (5) medical tests mentioned in the narratives  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/30815145">pmid:30815145</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC6371289/">pmcid:PMC6371289</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/xj2pllhlhbgx3ifa3646ycf43y">fatcat:xj2pllhlhbgx3ifa3646ycf43y</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20191016001644/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC6371289&amp;blobtype=pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/c7/46/c7468a2c4237bab7b0cd5c86bb6d0796a9763a17.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6371289" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>

ezDI: A Hybrid CRF and SVM based Model for Detecting and Encoding Disorder Mentions in Clinical Notes

Parth Pathak, Pinal Patel, Vishal Panchal, Narayan Choudhary, Amrish Patel, Gautam Joshi
<span title="">2014</span> <i title="Association for Computational Linguistics"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/aa3ggf3tbjarfj2zylzuxxqvdi" style="color: black;">Proceedings of the 8th International Workshop on Semantic Evaluation (SemEval 2014)</a> </i> &nbsp;
This paper describes the system used in Task-7 (Analysis of Clinical Text) of SemEval-2014 for detecting disorder mentions and associating them with their related CUI of UMLS 1 .  ...  For Task-A, a CRF based sequencing algorithm was used to find different medical entities and a binary SVM classifier was used to find relationship between entities.  ...  For example History of Present Illness can also be written as HPI, HPIS, Brief History etc.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3115/v1/s14-2045">doi:10.3115/v1/s14-2045</a> <a target="_blank" rel="external noopener" href="https://dblp.org/rec/conf/semeval/PathakPPCPJ14.html">dblp:conf/semeval/PathakPPCPJ14</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/wvejjkr3bna2fkku5m52ob2y6y">fatcat:wvejjkr3bna2fkku5m52ob2y6y</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180601212838/http://aclweb.org/anthology/S14-2045" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/db/cf/dbcf0a3c312855f5f32e4c7eceb84e0073e758a1.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.3115/v1/s14-2045"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> Publisher / doi.org </button> </a>

Systematic screening for unsafe driving due to medical conditions: Still debatable

Sandy Leproust, Emmanuel Lagarde, L Rachid Salmi
<span title="2008-01-23">2008</span> <i title="Springer Nature"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/aqnbwmukundndoqlyssp4bs4yi" style="color: black;">BMC Public Health</a> </i> &nbsp;
This adaptation was needed because of the complexity of the natural history of medical conditions and their potential consequences on driving and road safety.  ...  Individual criteria were mentioned in 3 to 72% of 36 papers pleading for or against screening.  ...  Both potential positive and negative effects of the intervention were mentioned in two-thirds of the papers.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/1471-2458-8-27">doi:10.1186/1471-2458-8-27</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/18215269">pmid:18215269</a> <a target="_blank" rel="external noopener" href="https://pubmed.ncbi.nlm.nih.gov/PMC2259338/">pmcid:PMC2259338</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/nbhxdricprb6znd2sqbkj4kyyi">fatcat:nbhxdricprb6znd2sqbkj4kyyi</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20190220075349/http://pdfs.semanticscholar.org/20e4/a27b857e473494824d286b42d4f79cc9eb01.pdf" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/20/e4/20e4a27b857e473494824d286b42d4f79cc9eb01.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1186/1471-2458-8-27"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="unlock alternate icon" style="background-color: #fb971f;"></i> springer.com </button> </a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2259338" title="pubmed link"> <button class="ui compact blue labeled icon button serp-button"> <i class="file alternate outline icon"></i> pubmed.gov </button> </a>
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