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DAhunter: a web-based server that identifies homologous proteins by comparing domain architecture

B. Lee, D. Lee
2008 Nucleic Acids Research  
We present DAhunter, a web-based server that identifies homologous proteins by comparing domain architectures, the organization of protein domains.  ...  Compared with other domain architecture algorithms, DAhunter is better at identifying homology. The server is available at  ...  ACKNOWLEDGEMENTS B.L. was supported by a grant from the KRIBB Research Initiative Program.  ... 
doi:10.1093/nar/gkn172 pmid:18411203 pmcid:PMC2447808 fatcat:tw3d5bh4jre5fjvuyjumt2pfla

Aquerium: A web application for comparative exploration of domain-based protein occurrences on the taxonomically clustered genome tree

Ogun Adebali, Igor B. Zhulin
2016 Proteins: Structure, Function, and Bioinformatics  
Here, we present Aquerium, a platform for visualizing genomic presence and absence of biomolecules with a focus on protein domain architectures.  ...  visual comparison of multiple domain-based protein occurences at once.  ...  Funding This work was supported in part by the National Institutes of Health grants GM072285 and DE024463 (to I.B.Z).  ... 
doi:10.1002/prot.25199 pmid:27802571 pmcid:PMC5167639 fatcat:sjtknbat4jdllm4tvvpofd4w7q