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CoryneCenter – An online resource for the integrated analysis of corynebacterial genome and transcriptome data

Heiko Neuweger, Jan Baumbach, Stefan Albaum, Thomas Bekel, Michael Dondrup, Andrea T Hüser, Jörn Kalinowski, Sebastian Oehm, Alfred Pühler, Sven Rahmann, Jochen Weile, Alexander Goesmann
2007 BMC Systems Biology  
Results: To facilitate the analysis of gene-regulatory networks, we have developed CoryneCenter, a web-based resource for the systematic integration and analysis of genome, transcriptome, and gene regulatory  ...  data storage and analysis, and (3) CoryneRegNet, an ontologybased data warehouse designed to facilitate the reconstruction and analysis of gene regulatory interactions.  ...  Acknowledgements JB, HN, and SO would like to thank the International Graduate School in Bioinformatics and Genome Research for providing financial support.  ... 
doi:10.1186/1752-0509-1-55 pmid:18034885 pmcid:PMC2212648 fatcat:f5vtl5tginb3vd64wiltwdkfvu

MeltDB: a software platform for the analysis and integration of metabolomics experiment data

Heiko Neuweger, Stefan P. Albaum, Michael Dondrup, Marcus Persicke, Tony Watt, Karsten Niehaus, Jens Stoye, Alexander Goesmann
2008 Computer applications in the biosciences : CABIOS  
and integrated storage and analysis of data obtained from metabolomics experiments.  ...  The newly developed system covers the process from raw data management to the visualization of results in a knowledge-based background and is integrated into the existing software platforms of genomics  ...  An alternative strategy was developed for the CoryneCenter platform Neuweger et al. (2007) for the integrated analysis of corynebacterial genome and transcriptome data.  ... 
doi:10.1093/bioinformatics/btn452 pmid:18765459 fatcat:6kraieexyvaq7hcx4fikyqg5gq