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D1.2 Roadmap and pilot requirements 2nd version

Christophe Guillotel-Nothmann, Jacopo De Berardinis, Thomas Bottini, Philippe Cathé, Enrico Daga, Marilena Daquino, Achille Davy-Rigaux, Marco Gurrieri, Peter Van Kranenburg, Eleanora Marzi, James McDermott, Albert Meroño Peñuela (+3 others)
2022 Zenodo  
on the Web portal (see Deliverable 1.95); work package 2 (WP 2) (see Deliverables 2.1, 2.4 and 2.77), WP 5 and the groups gathering the pilots and the work packages for the definition of a socio-technical  ...  Polifonia is driven by ten pilot use cases which provide both a validation context and the input requirements to the other research and development work packages.  ...  Web portal.  ... 
doi:10.5281/zenodo.7116560 fatcat:mflfxi5zffetdo77migtnszny4

BioMart: driving a paradigm change in biological data management

A. Kasprzyk
2011 Database: The Journal of Biological Databases and Curation  
annotations from additional, independentlymaintained databases that are available in the BioMart Central Portal.  ...  In addition, they can draw on the wealth of information available through the portal to expose their data in the context of third party annotations.  ... 
doi:10.1093/database/bar049 pmid:22083790 pmcid:PMC3215098 fatcat:nv2fjtmggvgh3nx75yhszghbze

qPortal: A platform for data-driven biomedical research

Christopher Mohr, Andreas Friedrich, David Wojnar, Erhan Kenar, Aydin Can Polatkan, Marius Cosmin Codrea, Stefan Czemmel, Oliver Kohlbacher, Sven Nahnsen, Frederique Lisacek
2018 PLoS ONE  
Here, we illustrate the feature-rich portal by simulating a biomedical study based on publically available data. We demonstrate the software's strength in supporting the entire project life cycle.  ...  Application of both systems to a small case study shows the differences between a data-driven approach (qPortal) and a workflow-driven approach (Galaxy). qPortal, a one-stop-shop solution for biomedical  ...  The fundamental requirement for annotating new experimental data presented in web portals can also drastically improve the means for sharing data with a wider scientific community.  ... 
doi:10.1371/journal.pone.0191603 pmid:29352322 pmcid:PMC5774839 fatcat:krsc5gog2be7nc4qxb7ddyld3u

On-demand business collaboration enablement with web services

John Y. Sayah, Liang-Jie Zhang
2005 Decision Support Systems  
We discuss some of the major research issues associated with facilitating extended business collaboration, and present our proposed Annotated Business HyperChain technology leveraging Web services and  ...  In this paper, we introduce a model for on-demand business process-based collaboration, namely, Extended Business Collaboration (eBC), and its major elements of modeling, and a configurable business protocol-enabling  ...  The evolution of the on-demand business collaboration solutions underlying this work was not possible without the key contributions in design and implementation of dedicated outstanding scientists and  ... 
doi:10.1016/j.dss.2004.04.011 fatcat:zulikwborfau7fltowckiqett4

An Approach to Build P2P Web Extensions [chapter]

Rodolfo Gonzalez, Sergio Firmenich, Alejandro Fernandez, Gustavo Rossi, Darío Velez
2020 Lecture Notes in Computer Science  
Web extensions are currently the most frequently used mechanism for end-users to externally adapt and enrich the web.  ...  While most functionality offered by extensions runs on the browser, extensions that offer collaboration, complex computation, or massive storage rely on a centralized server.  ...  in order to not spoil the overall Web experience.  ... 
doi:10.1007/978-3-030-50578-3_31 fatcat:qraix7ctwbahbprlymhf3eu6iq

Working Group Report on Semantic Technologies in Collaborative Applications

Thomas Riechert, Ernesto Ruiz, Ivan Cantador, Michael Engler, Danius Michaelides, Manfred Bortenschlager, Robert Tolksdorf
2006 15th IEEE International Workshops on Enabling Technologies: Infrastructure for Collaborative Enterprises (WETICE'06)  
Taking advantage of this technology, the first promising implementations of Semantic Web-based collaboration platforms such as Semantic Web portals, semantic Wikis and blogs, to name only a few, have been  ...  For example, there is very little use of reasoning beyond that driven by ontologies and the taxonomic classification of individuals. Semantic Web and Semantic Wikis dominate current work. 5.  ... 
doi:10.1109/wetice.2006.81 dblp:conf/wetice/RiechertRCEMBT06 fatcat:z5hlpnddujbl3ov53eq6axpeta


Peter Brusilovsky
2004 Proceedings of the 13th international World Wide Web conference on Alternate track papers & posters - WWW Alt. '04  
in intelligent tutoring and adaptive hypermedia.  ...  The goal of KnowledgeTree is to bridge the gap between the currently popular approach to Web-based education, which is centered on learning management systems vs. the powerful but underused technologies  ...  Adaptive collaboration support systems [37] can enhance the power of collaborative learning.  ... 
doi:10.1145/1013367.1013386 dblp:conf/www/Brusilovsky04 fatcat:ny5hiurm6javtdfzgm5dandvt4

The Semantic Web—New Ways to Present and Integrate Information

Steffen Staab
2003 Comparative and Functional Genomics  
A corresponding portal (or several) in the biology community could be driven by a combination of known ontologies (such as the gene ontology).  ...  The process of deep annotation runs as follows: Input: a website driven by an underlying relational database.  ...  The semantic web  ... 
doi:10.1002/cfg.240 pmid:18629101 pmcid:PMC2447388 fatcat:ymdtexs2dvecpdpnkhswye23fu

A Flexible Framework to Support Collaborative Software Evolution Analysis

Marco D'Ambros, Michele Lanza
2008 Software Maintenance and Reengineering (CSMR), Proceedings of the European Conference on  
on our analysis web portal.  ...  In this paper we present the Churrasco framework, which supports software evolution modeling, visualization and analysis through a web interface.  ...  We gratefully acknowledge the financial support of the Swiss National Science foundation for the project "DiCoSA -Distributed Collaborative Software Analysis" (SNF Project No. 118063) and the European  ... 
doi:10.1109/csmr.2008.4493295 dblp:conf/csmr/DAmbrosL08 fatcat:6bdvqh4nebey7jawkm7m46il6q


Peter Brusilovsky
2004 Alternate track papers & posters of the 13th international conference on World Wide Web - WWW Alt. '04  
in intelligent tutoring and adaptive hypermedia.  ...  The goal of KnowledgeTree is to bridge the gap between the currently popular approach to Web-based education, which is centered on learning management systems vs. the powerful but underused technologies  ...  Adaptive collaboration support systems [37] can enhance the power of collaborative learning.  ... 
doi:10.1145/1010432.1010451 fatcat:v6vpknignvendf6n6cnsv647pq

Portal-based Knowledge Environment for Collaborative Science

Karen Schuchardt, Carmen Pancerella, Larry A. Rahn, Brett Didier, Deepti Kodeboyina, David Leahy, James D. Myers, Oluwayemisi O. Oluwole, William Pitz, Branko Ruscic, Jing Song, Gregor von Laszewski (+1 others)
2007 Concurrency and Computation  
KnECS features a web portal with team and data collaboration tools, lightweight federation of data, provenance tracking, and multi-level support for application integration.  ...  The Knowledge Environment for Collaborative Science (KnECS) is an open source informatics toolkit designed to enable knowledge grids that interconnect science communities, unique facilities, data, and  ...  The primary user environment is a web portal based on the CompreHensive collaborativE Framework (CHEF) [14] software which enhances standard portal technology with support for teams and community interaction  ... 
doi:10.1002/cpe.1201 fatcat:gstnuhrzffgy5l22cr5vso3ivu

Distributed and Collaborative Software Evolution Analysis with Churrasco

Marco D'Ambros, Michele Lanza
2010 Science of Computer Programming  
In this paper, we present Churrasco, a tool to support collaborative software evolution analysis through a web interface.  ...  After describing the tool and its architecture, we provide a usage scenario of Churrasco on a large open source software system, and we present two collaboration experiments performed with, respectively  ...  Supplementary data Supplementary data associated with this article can be found, in the online version, at doi:10.1016/j.scico.2009.07.005.  ... 
doi:10.1016/j.scico.2009.07.005 fatcat:7livmyzhuvcjhghpwlloua7f44

Visualization Functionality of Virtual Factories - An Enhancement to Collaborative Business Process Management

Ahm Shamsuzzoha, Filipe Ferreira, Sven Abels, Américo Azevedo, Petri T. Helo
2014 Proceedings of the 16th International Conference on Enterprise Information Systems  
(ADaptive Virtual ENterprise ManufacTURing Environment) project.  ...  The dashboard features state-of-the art business intelligence and provides data visualization, user interfaces and menus to support VF partners to execute collaborative processes.  ...  ACKNOWLEDGEMENTS The authors would like to acknowledge the cofunding of the European Commission in NMP priority of the Seventh RTD Framework Programme (2007-13) for the ADVENTURE project (ADaptive Virtual  ... 
doi:10.5220/0004881405990604 dblp:conf/iceis/ShamsuzzohaFAAH14 fatcat:a4l42mylxzd3zlfgvkd2i3q3v4

Towards Semantic Web Portals

Michael Stollberg, Holger Lausen, Rubén Lara, Ying Ding, Sung-Kook Han, Dieter Fensel
2004 The Web Conference  
Thus, support for information sharing and communication in web portals is confined due to limitations in the underlying technologies.  ...  web portals.  ...  The work presented in this paper has been partially funded by the EU projects h-TechSight (IST-2001-33174), SWWS (IST-2001-37134) and OntoWeb (IST-2000-29243) .  ... 
dblp:conf/www/StollbergLLDHF04 fatcat:4leirbh3lzcczh66mtw3m6de2y

Collaborative Research: Frameworks: Ghub as a community-driven data-model framework for ice-sheet science

Patra, Abani,, Jason Briner, Sophie Nowicki, Beata Csatho, Toni Schenk, Kristin Poinar, Erika Simon, Justin Quinn, Eric Larour, Bill Lipscomb, Kate Thayer-Calder
2022 Zenodo  
Description of NSF/CSSI project for creating -- a community portal for ice sheet scientists with data and tools.  ...  data and model scientists • NSF Marc Stieglitz from Arctic Programs in attendance • Marc latched onto workshop outcome to increase data-model collaboration • Marc served as Polar Programs "domain" rep  ...  Tools that facilitate scientific analysis of complex datasets, and that can be easily adapted to a users needs.  ... 
doi:10.5281/zenodo.6858280 fatcat:vactt3bj75gg5ozsckcudekac4
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