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Cloudflow - enabling faster biomedical pipelines with MapReduce and Spark

Lukas Forer, Enis Afgan, Hansi Weissensteiner, Davor Davidovic, Guenther Specht, Florian Kronenberg, Sebastian Schoenherr
2016 Scalable Computing : Practice and Experience  
To alleviate some of the issues, we have previously developed Cloudflow -a high-level pipeline framework that allows users to create sophisticated biomedical pipelines using predefined code blocks while  ...  The Cloudflow framework is open source and freely available at https://github.com/genepi/cloudflow.  ...  Science and Research (BMWF) and by the FP7-PEOPLE programme grant 277144 (AIS-DC).  ... 
doi:10.12694/scpe.v17i2.1159 fatcat:eb2tpfewj5c55o7nahkzonbrku