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Chickspress: a resource for chicken gene expression

2019 Database: The Journal of Biological Databases and Curation  
Here we report Chickspress (http://geneatlas.arl.arizona.edu), the first publicly available gene expression resource for chicken tissues.  ...  Since there is no single source of chicken gene models, Chickspress incorporates both NCBI and Ensembl gene models and links these gene sets with experimental gene expression data and QTL information.  ...  Reecy for providing the Animal QTLDB gff3 files for chicken and advice on how these files relate to trait ontologies. Conflict of interest. None decared. Funding  ... 
doi:10.1093/database/baz058 pmid:31210271 pmcid:PMC6556980 fatcat:a6ig5wnmkrcxhplbgjv7iloifa

An atlas of the catalytically active liver and spleen kinases in chicken identified by chemoproteomics [article]

Bindu Nanduri, Cathy R. Gresham, Mark Ou, Winnie W. Hui, Richard H. Bailey, Mariola J Edelmann
2019 bioRxiv   pre-print
The identified tissue-specific expression atlas of active chicken kinases along with the ATP binding sites of kinases provide the basis for the development of specific drug targets for multiple chicken  ...  Chicken is the first agricultural animal to have a sequenced genome, but current kinase annotations of Gallus gallus are overwhelmingly limited to the predictions generated based on homology or isolated  ...  Chicken UniProt proteins were mapped a unique NCBI Gene 425 records, and any discrepancies were reviewed manually.  ... 
doi:10.1101/634683 fatcat:mi3dnktbivcxbaxnknf3dmhcdq

Comparative transcriptomics analyses across species, organs and developmental stages reveal functionally constrained lncRNAs

Fabrice Darbellay, Anamaria Necsulea, Amanda Larracuente
2019 Molecular biology and evolution  
LncRNAs are often differentially expressed among developmental stages and are less abundant in embryos and newborns compared to adult individuals, in agreement with a requirement for tighter expression  ...  (brain, kidney, liver and testes) and three species (mouse, rat and chicken).  ...  Chickspress: a resource for chicken gene expression. Database. 1– Berlin Heidelberg: Springer-Verlag. Available from: https://www. 14. [accessed 2019 Aug 11].  ... 
doi:10.1093/molbev/msz212 pmid:31539080 pmcid:PMC6984365 fatcat:fnxb5wnlo5fffey6tueebl3jk4