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Identification of Genes Involved in Wild Crucifer Rorippa indica Resistance Response on Mustard Aphid Lipaphis erysimi Challenge

Lekha Bandopadhyay, Debabrata Basu, Samir Ranjan Sikdar, Zhengguang Zhang
2013 PLoS ONE  
Twenty four identifications were then studied by quantitative real time RT PCR analysis at 6, 12, 24 and 48 hour time point post infestation to understand the early-to-late defense response through their  ...  defense response genes.  ...  Besides gaining molecular insight about the resistant response in R. indica, the transcriptomic study offers some promising identifications in the context of building L. erysimi resistance in the consistently  ... 
doi:10.1371/journal.pone.0073632 pmid:24040008 pmcid:PMC3767759 fatcat:zlvwk5z55fbs5c3o5ypu53kere

Identification of MAMP-Responsive Plasma Membrane-Associated Proteins in Arabidopsis thaliana Following Challenge with Different LPS Chemotypes from Xanthomonas campestris

Raeesa H. Hussan, Ian A. Dubery, Lizelle A. Piater
2020 Pathogens  
Thus, identification of the LPS plasma membrane (PM) receptor(s)/receptor complex in Arabidopsis thaliana through proteomics will contribute to a deeper understanding of induced defense responses.  ...  This resulted in the identification of proteins from several functional categories, but importantly, those involved in perception and defense.  ...  Introduction Pathogenic microbes affect a plant's development, reproduction, and ultimately, production yield [1] and as such, the control thereof remains a major challenge in agriculture.  ... 
doi:10.3390/pathogens9100787 pmid:32992883 pmcid:PMC7650673 fatcat:gjq75raaxbcjvk254vts55ryl4

Identification of Ramie Genes in Response to Pratylenchus coffeae Infection Challenge by Digital Gene Expression Analysis

Yongting Yu, Liangbin Zeng, Zhun Yan, Touming Liu, Kai Sun, Taotao Zhu, Aiguo Zhu
2015 International Journal of Molecular Sciences  
Among them, the expressions of 117 and 20 DEGs were up-and down-regulated in P. coffeae-challenged ramie, respectively.  ...  Digital gene expression (DGE) analysis was performed on both the control roots (CK) and P. coffeae-challenged roots (CH), and the differentially expressed genes (DEGs) were identified.  ...  Based on these finding, samples treated for 1, 3, and 5 days were used to study the early molecular response of ramie to P. coffeae challenge.  ... 
doi:10.3390/ijms160921989 pmid:26378527 pmcid:PMC4613293 fatcat:2dpwxbslsjfinmrssiiemhf554

Identification of glutaredoxin 1 and glutaredoxin 2 genes from Venerupis philippinarum and their responses to benzo[a]pyrene and bacterial challenge

Changkao Mu, Qing Wang, Zeyi Yuan, Zhendong Zhang, Chunlin Wang
2012 Fish and Shellfish Immunology  
VpGrx1 and VpGrx2 perhaps involved in the regulation of redox homeostasis and innate immune responses of V. philippinarum.  ...  After Vibrio challenge, both the expression levels of VpGrx1 and VpGrx2 mRNA in hemocytes were significantly upregulated at 24 h.  ...  Therefore, understanding the immune response of manila clam to bacterial challenge and pollutants exposure will facilitate the development of health care management in clam culture.  ... 
doi:10.1016/j.fsi.2011.12.001 pmid:22197689 fatcat:i7qq32hvojbwfavrxgmmhhoeua

Identification of Nrf2-dependent airway epithelial adaptive response to proinflammatory oxidant-hypochlorous acid challenge by transcription profiling

Lingxiang Zhu, Jingbo Pi, Shinichiro Wachi, Melvin E. Andersen, Reen Wu, Yin Chen
2008 American Journal of Physiology - Lung cellular and Molecular Physiology  
Identification of Nrf2-dependent airway epithelial adaptive response to proinflammatory oxidant-hypochlorous acid challenge by transcription profiling.  ...  Identification of epithelial Nrf2 activation in HOCl challenge has significant implications in the areas of biomedicine and risk assessment.  ...  to HOCl challenge.  ... 
doi:10.1152/ajplung.00310.2007 pmid:18156441 fatcat:yu3smrty4zb7fj7kcrk76e2pbm

Identification of multiple vasotocin receptor cDNAs in teleost fish: Sequences, phylogenetic analysis, sites of expression, and regulation in the hypothalamus and gill in response to hyperosmotic challenge

Sean C. Lema
2010 Molecular and Cellular Endocrinology  
In response to an acute hyper osmotic challenge, pro-vasotocin and V2 mRNA levels in the hypothalamus decreased, while transcripts of VIal in the hypothalamus and Vla2 in the gills increased.  ...  Vasopressin and its homolog vasotocin regulate hydrominerai balance, stress responses, and social behaviors in vertebrates.  ...  Few studies have examined changes in teleost VT receptor mRNAs in response to salinity challenge.  ... 
doi:10.1016/j.mce.2010.02.015 pmid:20167249 fatcat:m6rg2me5pze6pdyqcyn455nx34

Identification of molecular and physiological responses to chronic environmental challenge in an invasive species: the Pacific oyster,Crassostrea gigas

Melody S. Clark, Michael A. S. Thorne, Ana Amaral, Florbela Vieira, Frederico M. Batista, João Reis, Deborah M. Power
2013 Ecology and Evolution  
The transcriptional profiling also elaborated on the cellular responses underpinning the physiological results, including the identification of the PI3K/AKT/mTOR pathway as a potentially novel marker for  ...  chronic environmental challenge.  ...  Our data show that longer term molecular responses cannot be predicted from short-term acute studies and emphasize the effectiveness of transcriptional profiling as a molecular tool with the identification  ... 
doi:10.1002/ece3.719 pmid:24223268 pmcid:PMC3797477 fatcat:k46vybvclzhzxfqzcyhebl73ry

Mass spectrometric identification of Rab23 phosphorylation as a response to challenge by cytidine 3′,5′-cyclic monophosphate in mouse brain

A. Elizabeth Bond, Edward Dudley, Robin Tuytten, Filip Lemière, Christopher J. Smith, Eddy L. Esmans, Russell P. Newton
2007 Rapid Communications in Mass Spectrometry  
Immobilized metal affinity chromatography (IMAC) was used to selectively extract proteins phosphorylated in mouse brain in response to challenge by cAMP, cGMP and cCMP, followed by matrix-assisted laser  ...  (MALDI-ToFMS) and liquid chromatography/electrospray ionization tandem mass spectrometry (LC/ESI-MS/MS) of tryptic digests to identify Rab23 as the first protein reported to be phosphorylated only in response  ...  Figure 2 . 2 Identification of the peptide TSVKEDLNVSEVFK as a tryptic fragment of a phosphoprotein produced in murine brain in response to challenge by cyclic CMP.  ... 
doi:10.1002/rcm.3141 pmid:17639578 fatcat:p3gxekib3rgeph57fisrniaboy

Molecular Identification of Two Prophenoloxidase-Activating Proteases From the Hemocytes of Plutella xylostella (Lepidoptera: Plutellidae) and Their Transcript Abundance Changes in Response to Microbial Challenges

Min Shi, Xiao-Yu Chen, Ni Zhu, Xue-Xin Chen
2014 Journal of Insect Science  
We also examined the transcript patterns of PxPAPa, PxPAPb, and pxPAP3, another clip-domain serine protease gene, response to different microbial challenges by using real-time quantitative polymerase chain  ...  This study provides new insights into the molecular events that occur during the immune response, particularly melanization cascade that is involved in encapsulation and nodulation of pathogen or parasite  ...  Transcript Abundance of PxPAP and pxPAP3 Response to Microbial Challenges.  ... 
doi:10.1093/jisesa/ieu041 pmid:25399433 pmcid:PMC5633980 fatcat:tvztaaxplbc77iq36hm2bpekna

Challenging ocular image recognition

V. Paúl Pauca, Michael Forkin, Xiao Xu, Robert Plemmons, Arun A. Ross, Sárka O. Southern, Kevin N. Montgomery, Carl W. Taylor, Bernhard H. Weigl, B. V. K. Vijaya Kumar, Salil Prabhakar, Arun A. Ross
2011 Sensing Technologies for Global Health, Military Medicine, Disaster Response, and Environmental Monitoring; and Biometric Technology for Human Identification VIII  
Our approach is two fold: • First, we developed the Challenging Ocular Image Recognition (COIR) database of metadata associated with existing face and iris image and video datasets, e.g.  ...  In this work, we seek to further establish the use of information in the ocular region as a viable alternative for enhancing iris recognition in non-ideal data resulting from challenging imaging scenarios  ... 
doi:10.1117/12.885386 fatcat:w6d4wiq5qrdi3eothz6eyf32hq

Identification, sequence characterization and expression analysis of the arginine kinase gene in response to laminarin challenge from the Oriental land snail, Nesiohelix samarangae
동양달팽이(Nesiohelix samarangae)의 arginine kinase 유전자 분석 및 발현 패턴에 관한 연구

Ji Eun Jeong, Yong Seok Lee
2013 The Korean Journal of Malacology  
Fig. 5 . 45 A predicted three dimensional structure of arginine kinase by 3d-jigsaw program Time dependent expression pattern of arginine kinase mRNA in digestive gland of N. samarangae after laminarin challenge  ... 
doi:10.9710/kjm.2013.29.3.171 fatcat:hcwdhwwsh5dbbcdh7otpuny2nq

The sbv IMPROVER Systems Toxicology computational challenge: Identification of human and species-independent blood response markers as predictors of smoking exposure and cessation status

Vincenzo Belcastro, Carine Poussin, Yang Xiang, Maurizio Giordano, Kumar Parijat Tripathi, Akash Boda, Ali Tugrul Balci, Ismail Bilgen, Sandeep Kumar Dhanda, Zhongqu Duan, Xiaofeng Gong, Rahul Kumar (+12 others)
2018 Computational Toxicology  
Risk assessment in the context of 21 st century toxicology relies on the elucidation of mechanisms of toxicity and the identification of exposure response markers, usually from high-throughput data, using  ...  In conclusion, the Systems Toxicology challenge demonstrated the feasibility of extracting a consistent blood-based smoke exposure response gene signature and further stressed the importance of independent  ...  Acknowledgments We thank all participants for their active participation to the sbv IMPROVER Systems Toxicology computational challenge; Anouk Ertan, Laure Cannesson, and David Page for their support on  ... 
doi:10.1016/j.comtox.2017.07.004 pmid:30221212 pmcid:PMC6136260 fatcat:eh4mnnqk5vc4vnyqxifnonlsre

An Identification of Students' Responses Towards the Implementation of Biological Learning to Answer the Challenges of Educators in The Industrial Revolution 4.0 Era

Indah Dewi Sartika, Linda Advinda
2020 Proceedings of the International Conference on Biology, Sciences and Education (ICoBioSE 2019)   unpublished
Therefore, the identification of the students' responses to the implementation of biological learning was done to answer the challenges of educators in the industrial revolution 4.0 era.  ...  Nevertheless, education 4.0 is a response to the needs of IR 4.0. One of the challenges of educators in the IR 4.0 era was being able to innovate creatively in the implementation of learning.  ...  Therefore, this study carried out the identification of Students' Responses Towards the Implementation of Biological Learning to answer the Challenges of Educators in the Industrial Revolution 4.0 Era.  ... 
doi:10.2991/absr.k.200807.046 fatcat:6p4yrmf5lbgk7mfkar3nut43qy

Secure Human-Computer Identification (Interface) Systems against Peeping Attacks: SecHCI [article]

Shujun Li, Heung-Yeung Shum
2005 IACR Cryptology ePrint Archive  
Two general structures of secure human-computer identification systems are proposed against peeping attacks.  ...  This paper focuses on human-computer identification systems against peeping attacks, in which adversaries can observe (and even control) interactions between humans (provers) and computers (verifiers).  ...  The identification will not complete until t normal challenge-response rounds are made.  ... 
dblp:journals/iacr/LiS05 fatcat:nckil5tedvglvn3a4m5azozwle

Time windows-based team performance measures: a framework to measure team performance in dynamic environments

Hari Thiruvengada, Ling Rothrock
2006 Cognition, Technology & Work  
Response to Challenge #3 Time window addresses the third challenge by defining team performance using overt behavior.  ...  Response to Challenge #6 We address the sixth challenge by measuring team performance at the individual and team levels.  ... 
doi:10.1007/s10111-006-0046-8 fatcat:xkfj2yfddvcenmhaygf5nnjwca
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