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CamBAfx: Workflow design, implementation and application for neuroimaging

Cinly Ooi
2009 Frontiers in Neuroinformatics  
CamBAfx is a workflow application designed for both researchers who use workflows to process data (consumers) and those who design them (designers).  ...  The user interface contains all the workflow facilities expected by consumers. Using the Eclipse Extension Mechanism designers are encouraged to customize CamBAfx for their own pipelines.  ...  CamBAfx: workfl ow design, implementation and application for neuroimaging WORKFLOW ENVIRONMENTS Workfl ows are normally visualised as pipelines, i.e., a collection of modules with pipes to represent  ... 
doi:10.3389/neuro.11.027.2009 pmid:19826470 pmcid:PMC2746122 fatcat:esvpenf5dvarxnuagqivt4dpay

Unified Framework for Development, Deployment and Robust Testing of Neuroimaging Algorithms

Alark Joshi, Dustin Scheinost, Hirohito Okuda, Dominique Belhachemi, Isabella Murphy, Lawrence H. Staib, Xenophon Papademetris
2011 Neuroinformatics  
We present the design and implementation of a novel object-oriented framework that allows for rapid development of complex image analysis algorithms with many reusable components and the ability to easily  ...  Developing both graphical and commandline user interfaces for neuroimaging algorithms requires considerable effort.  ...  The aim of this paper is to present the design of the framework and share our experience of developing and testing the framework with the neuroimaging community for further development of similar open  ... 
doi:10.1007/s12021-010-9092-8 pmid:21249532 pmcid:PMC3066099 fatcat:6pkv54lqlnh67hjs7c5or6v5aa