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CROSSalive: a web server for predicting the in vivo structure of RNA molecules
2019
Bioinformatics
Preserved Fulltext
RNA structure is difficult to predict in vivo due to interactions with enzymes and other molecules. ...
Here we introduce CROSSalive, an algorithm to predict the single- and double-stranded regions of RNAs in vivo using predictions of protein interactions. ...
of Economy and Competitiveness BFU2017-86970-P. ...
doi:10.1093/bioinformatics/btz666
pmid:31504168
fatcat:mw62zkkjnrdofovcza4hf32tji
CROSSalive: a web server for predicting the in vivo structure of RNA molecules
[article]
2019
bioRxiv
pre-print
Preserved Fulltext
A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2020; you can also visit the original URL.
The file type is application/pdf.
We introduce CROSSalive, an algorithm to predict RNA secondary structure content in vivo without sequence length limitations. ...
The method also predicts the effect of N6 adenosine methylation (m6a) on RNA structure using predictions of protein interactions. ...
ACKNOWLEDGEMENTS The authors thank Andrea Cerase and Alessio Colantoni. ...
doi:10.1101/626085
fatcat:ddnwp3fvojfddiz44qwxqaoatq