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The Nucleic Acid Database: new features and capabilities
2013
Nucleic Acids Research
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The Nucleic Acid Database (NDB) (http://ndbserver. rutgers.edu) is a web portal providing access to information about 3D nucleic acid structures and their complexes. In addition to primary data, the NDB contains derived geometric data, classifications of structures and motifs, standards for describing nucleic acid features, as well as tools and software for the analysis of nucleic acids. A variety of search capabilities are available, as are many different types of reports. This article
doi:10.1093/nar/gkt980
pmid:24185695
pmcid:PMC3964972
fatcat:esxry52pmrgypcdyvlgjagjtaq
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... s the recent redesign of the NDB Web site with special emphasis on new RNA-derived data and annotations and their implementation and integration into the search capabilities.
Trendspotting in the Protein Data Bank
2013
FEBS Letters
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The Protein Data Bank (PDB) was established in 1971 as a repository for the three dimensional structures of biological macromolecules. Since then, more than 85 000 biological macromolecule structures have been determined and made available in the PDB archive. Through analysis of the corpus of data, it is possible to identify trends that can be used to inform us abou the future of structural biology and to plan the best ways to improve the management of the ever-growing amount of PDB data.
doi:10.1016/j.febslet.2012.12.029
pmid:23337870
pmcid:PMC4068610
fatcat:pc6muagsrzh6lcqjm4ewkct5sa