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Building an Index of Nanomedical Resources: An Automatic Approach Based on Text Mining [chapter]

Stefano Chiesa, Miguel García-Remesal, Guillermo de la Calle, Diana de la Iglesia, Vaida Bankauskaite, Víctor Maojo
2008 Lecture Notes in Computer Science  
This method is based on an existing approach to automatically build an index of biomedical resources from research papers using text mining techniques.  ...  Next we will introduce a method targeted to the automated creation of an index of nanomedical resources.  ...  This research has been supported by the European Commissionfunded ACGT project (IST-2005-026996) and the Spanish Ministry of Education (TSI2006-13021-C02-01).  ... 
doi:10.1007/978-3-540-85565-1_7 fatcat:kbvnisl7qzfr7grmtuqnfygsyy

BIRI: a new approach for automatically discovering and indexing available public bioinformatics resources from the literature

Guillermo de la Calle, Miguel García-Remesal, Stefano Chiesa, Diana de la Iglesia, Victor Maojo
2009 BMC Bioinformatics  
These experiments suggest the feasibility of our approach for automatically discovering and indexing current and future bioinformatics resources.  ...  To test the web service, we created a pilot web application to access a preliminary knowledge base of resources. We tested our tool using an initial set of 400 abstracts.  ...  Acknowledgements The present work has been funded by the Spanish Ministry of Science and Innovation (OntoMineBase project, reference TSI2006-13021-C02-01, and COMBIOMED-RETICS), the European Commission  ... 
doi:10.1186/1471-2105-10-320 pmid:19811635 pmcid:PMC2765974 fatcat:odolcqvt25hufegsv2rd2x3baa

Nanoinformatics knowledge infrastructures: bringing efficient information management to nanomedical research

D de la Iglesia, R E Cachau, M García-Remesal, V Maojo
2013 Computational Science & Discovery  
Nanotechnology represents an area of particular promise and significant opportunity across multiple scientific disciplines.  ...  In nanomedicine, recent studies are producing large amounts of structural and property data, highlighting the role for computational approaches in information management.  ...  Acknowledgments The work of the authors in this area of research has been partially funded by the European Commission (the ACTION-Grid Support Action, FP7-224176), the Spanish Ministry of Economy and Competitiveness  ... 
doi:10.1088/1749-4699/6/1/014011 pmid:24932210 pmcid:PMC4053539 fatcat:3gu2c3gju5fixguxnrjtkobnbi

Nanoinformatics: developing new computing applications for nanomedicine

Victor Maojo, Martin Fritts, Fernando Martin-Sanchez, Diana De la Iglesia, Raul E. Cachau, Miguel Garcia-Remesal, Jose Crespo, Joyce A. Mitchell, Alberto Anguita, Nathan Baker, Jose Maria Barreiro, Sonia E. Benitez (+23 others)
2012 Computing  
Nanoinformatics has recently emerged to address the need of computing applications at the nano level.  ...  Acknowledgments This work has been partially funded by the European Commission (the ACTION-Grid Support Action, FP7-224176) and the Spanish Ministry of Science and Innovation (FIS/AES PS09/00069 and RETICS  ...  Open Access This article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s)  ... 
doi:10.1007/s00607-012-0191-2 pmid:22942787 pmcid:PMC3430140 fatcat:ttef5foh5bgfbom2kllejh62fa

Nanoinformatics: a new area of research in nanomedicine

Victor Maojo, Fritts, Diana de la Iglesia, Cachau, Garcia-Remesal, Mitchell, Kulikowski
2012 International Journal of Nanomedicine  
In this paper, we present a review of nanoinformatics, describing its origins, the problems it addresses, areas of interest, and examples of current research initiatives and informatics resources.  ...  for various types of nanomaterials, and research on new modeling and simulation techniques for nanoparticles.  ...  Politécnica de Madrid, the Comunidad de Madrid and the National Center for Research Resources/National Center for Advancing Translational Sciences (Public Health Services research grants UL1-RR025764  ... 
doi:10.2147/ijn.s24582 pmid:22866003 pmcid:PMC3410693 fatcat:5im7a34ogbffpcwpg6ycoylor4

A Machine Learning Approach to Identify Clinical Trials Involving Nanodrugs and Nanodevices from ClinicalTrials.gov

Diana de la Iglesia, Miguel García-Remesal, Alberto Anguita, Miguel Muñoz-Mármol, Casimir Kulikowski, Víctor Maojo, Vasilis J. Promponas
2014 PLoS ONE  
to the lack of both a common definition for nanotechnology and of standards for reporting nanomedical experiments and results.  ...  Results and Conclusions: The performance of the best automated classifier closely matches that of experts (AUC over 0.95), suggesting that it is feasible to automatically detect the presence of nanotechnology  ...  Julián Dorado, from the University of A Coruñ a (Spain), who provided invaluable insight and expertise for assessing and curating the extensive body of material used in this research.  ... 
doi:10.1371/journal.pone.0110331 pmid:25347075 pmcid:PMC4210133 fatcat:sagbusgf2bdlvbncvqbv46qwsm

Nanoinformatics and DNA-Based Computing: Catalyzing Nanomedicine

Victor Maojo, Fernando Martin-Sanchez, Casimir Kulikowski, Alfonso Rodriguez-Paton, Martin Fritts
2010 Pediatric Research  
Nanoinformatics can accelerate the introduction of nano-related research and applications into clinical practice, leading to an area that could be called "translational nanoinformatics."  ...  Nanoinformatics and DNA-based computing are together likely to completely change the way we model and process information in biomedicine and impact the emerging field of nanomedicine most strongly.  ...  Based on text mining techniques, the authors have built a new approach to automatically create a searchable index of bioinformatics resources, with information automatically extracted from abstracts of  ... 
doi:10.1203/pdr.0b013e3181d6245e pmid:20118825 fatcat:wcrx72ih5nd3bfabxpgujd6ade

Predicting cytotoxicity of PAMAM dendrimers using molecular descriptors

David E Jones, Hamidreza Ghandehari, Julio C Facelli
2015 Beilstein Journal of Nanotechnology  
The results indicate that data mining and machine learning can be effectively used to predict the cytotoxicity of PAMAM dendrimers on Caco-2 cells.  ...  The use of data mining techniques in the field of nanomedicine has been very limited.  ...  Also, this work has been partially funded by the National Center for Advancing Translational Sciences of the National Institutes of Health under Award Number 1ULTR001067 and NIH grants R01ES024681 and  ... 
doi:10.3762/bjnano.6.192 pmid:26665059 pmcid:PMC4660915 fatcat:b5sfotxfiffx5f7rpnnjxqx47q

Biomedical Informatics – A Confluence of Disciplines?

A. Hasman, E. Ammenwerth, H. Dickhaus, P. Knaup, C. Lovis, J. Mantas, V. Maojo, F. J. Martin-Sanchez, M. Musen, V. L. Patel, G. Surján, J. L. Talmon (+1 others)
2011 Methods of Information in Medicine  
Method: Inviting an international group of experts in biomedical informatics and related disciplines on the occasion of the 50th anniversary of Methods of Information in Medicine to present their viewpoints  ...  Most of the authors agree that biomedical informatics is an interdisciplinary  ...  Acknowledgments The authors drafted individual sections based on their contributions at the Symposium: Viewpoint 1 (GS), Viewpoint 2 (CL), Viewpoint 3 (MM), Viewpoint 4 (FJM-S), Viewpoint 5 (VM), Viewpoint  ... 
doi:10.3414/me11-06-0003 pmid:22146914 fatcat:coqtdnvi2vdmvlhdbyf5jjkyla

Can an InChI for Nano Address the Need for a Simplified Representation of Complex Nanomaterials across Experimental and Nanoinformatics Studies?

Iseult Lynch, Antreas Afantitis, Thomas Exner, Martin Himly, Vladimir Lobaskin, Philip Doganis, Dieter Maier, Natasha Sanabria, Anastasios G. Papadiamantis, Anna Rybinska-Fryca, Maciej Gromelski, Tomasz Puzyn (+18 others)
2020 Nanomaterials  
Chemoinformatics has developed efficient ways of representing chemical structures for small molecules as simple text strings, simplified molecular-input line-entry system (SMILES) and the IUPAC International  ...  A workshop organized by the H2020 research infrastructure NanoCommons and the nanoinformatics project NanoSolveIT analyzed issues involved in developing an InChI for NMs (NInChI).  ...  NInChI will enhance FAIRness of NMs datasets by providing a higher level of indexing based on information in the different layers.  ... 
doi:10.3390/nano10122493 pmid:33322568 pmcid:PMC7764592 fatcat:pxibwqk64ze25bqgpwc6zu6egi

Career Exploration in Child and Family Studies: Focus on Curricula and Research Topics

Songyon Cho, Gyesook Yoo, Hyeyeong Choi, Haeyoung Shin
2016 Family and Environment Research  
and a vast indexed library of evidence based experience modules (media). 94.  ...  Asteroid mining 382 383 2024 It is anticipated that mining of asteroids and planets will yield new resources, elements, and materials that will enhance the quality of life on our planet. individual to  ...  Space Mining 216 : It is predicted that mining of asteroids and planets could yield new resources, elements, and materials that will enhance the quality of life on our planet.  ... 
doi:10.6115/fer.2016.005 fatcat:dcokzycw2jh7bfic2c6jebsp5e

The Nexus Between Artificial Intelligence and Economics [chapter]

Ad J. W. van de Gevel, Charles N. Noussair
2013 SpringerBriefs in Economics  
Speculating on seemingly unachievable goals like this one is subject to a cognitive trap, the belief that improbable technological advances automatically become more likely simply by looking further away  ...  By the mid 1980s, the classical computational approach had brought forward many successes in terms of computer and engineering applications: clever machine learning algorithms, text processing systems  ...  In the 1950s the average turnover in the S&P 500, measured by additions and deletions to the index, was about 3-4% per annum, suggesting an average life, as a component of the index, of about 25-35 years  ... 
doi:10.1007/978-3-642-33648-5_1 fatcat:6uclihbcqrfajkhwpapp5wgkou

International Healthcare Vision 2037 - new technologies, educational goals and entrepreneurial challenges ; proceedings + summary of the 5th BME-IDEA EU Conference ; 11 - 13 June 2017, Magdeburg, Germany [article]

Michael Friebe, Universitäts- Und Landesbibliothek Sachsen-Anhalt, Martin-Luther Universität
2018
Compliance with Ethical Requirements Authors declare having no conflict of interest. Informed Consents are being obtained with subjects for data acquisition since 2015.  ...  Materials and Methods The basic concept is build on a central data base of individual anonymized patient data, a personal advanced smartphone and an advanced photo booth.  ...  This disease follows an asymptomatic phase of development which builds up in body silently over a period of time without any major sign on health of an individual.  ... 
doi:10.25673/4992 fatcat:ehdh42wbl5gqnd2z3ofkh5qrie

Federal Institute for Risk Assessment Edited by Perception of Nanotechnology in Internet-based Discussions The risks and opportunities of nanotechnology and nanoproducts: results of an online discourse analysis Project coordination

Gaby-Fleur Böl, Astrid Epp, Rolf Hertel, Steffen Albrecht, Christopher Coenen, Matthias Trénel, Gaby-Fleur Böl, Astrid Epp, Rolf Hertel
unpublished
Perception of Nanotechnology in Internet-based Discussions -The risks and opportunities of nanotechnology and nanoproducts: results of an online discourse analysis Federal Institute for Risk Assessment  ...  Example 5: Example of a forum post in the medicine category relating to nano cancer therapies. Example 6: Example of a forum post in the medicine category relating to dental nanoproducts.  ...  This means that online communication cannot be collected representatively however hard one tries. For this reason, the present study chose an approach based on qualitativeheuristic social research.  ... 
fatcat:6km44n4rpncblivhddeos2mjby

Federal Institute for Risk Assessment Edited by Perception of Nanotechnology in Internet-based Discussions The risks and opportunities of nanotechnology and nanoproducts: results of an online discourse analysis Project coordination

Gaby-Fleur Böl, Astrid Epp, Rolf Hertel, Steffen Albrecht, Christopher Coenen, Matthias Trénel, Gaby-Fleur Böl, Astrid Epp, Rolf Hertel
unpublished
Perception of Nanotechnology in Internet-based Discussions-The risks and opportunities of nanotechnology and nanoproducts: results of an online discourse analysis Federal Institute for Risk Assessment  ...  Example 5: Example of a forum post in the medicine category relating to nano cancer therapies. Example 6: Example of a forum post in the medicine category relating to dental nanoproducts.  ...  This means that online communication cannot be collected representatively however hard one tries. For this reason, the present study chose an approach based on qualitativeheuristic social research.  ... 
fatcat:txpcfw5nwbacpizsfur553l7zq