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BodyMap-Xs: anatomical breakdown of 17 million animal ESTs for cross-species comparison of gene expression

O. Ogasawara
2006 Nucleic Acids Research  
BodyMap-Xs (http://bodymap.jp) is a database for cross-species gene expression comparison.  ...  It was created by the anatomical breakdown of 17 million animal expressed sequence tag (EST) records in DDBJ using a sorting program tailored for this purpose.  ...  ACKNOWLEDGEMENTS This work is supported by a grant-in-aid for scientific research in priority areas (genome information science, grant ID 17017037) from the Ministry of Education, Culture, Sports, Science  ... 
doi:10.1093/nar/gkj137 pmid:16381946 pmcid:PMC1347499 fatcat:vzpoqe7xkbh5fl63kpgjkmjooq

Gene-L'EXPO: a tool to extract knowledge From transcriptomes and find 'Literature-Sparse' relationships between genes and tissues

Teruyoshi Hishiki, Issei Tamada, Kousaku Okubo
2008 AMIA Annual Symposium Proceedings  
The anatomical categories of various expressed sequence tag (EST) libraries were also automatically determined.  ...  Data pairs of tissues and the genes that might be expressed there were automatically extracted from text with vocabularies for the genes and tissues.  ...  Acknowledgments This work was supported by grants from the New Energy and Industrial Technology Development Organization (NEDO) of Japan.  ... 
pmid:18999036 pmcid:PMC2656066 fatcat:ecwvwgj4wreehcqoyi5jpqbjae