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BioGRID REST Service, BiogridPlugin2 and BioGRID WebGraph: new tools for access to interaction data at BioGRID

Andrew G. Winter, Jan Wildenhain, Mike Tyers
2011 Computer applications in the biosciences : CABIOS  
The Biological General Repository for Interaction Datasets (BioGRID) representational state transfer (REST) service allows full URL-based access to curated protein and genetic interaction data at the BioGRID  ...  We also describe two visualization tools that interface with the REST service, the BiogridPlugin2 for Cytoscape and the BioGRID WebGraph.  ...  ACKNOWLEDGEMENTS We thank Bobby-Joe Breitkreutz and Chris Stark for reading the manuscript and testing.  ... 
doi:10.1093/bioinformatics/btr062 pmid:21300700 pmcid:PMC3065694 fatcat:ocuiea765jbuzfjweetuqcs62i

DEVELOPMENT OF A HEPATITIS C VIRUS KNOWLEDGEBASE WITH COMPUTATIONAL PREDICTION OF FUNCTIONAL HYPOTHESIS OF THERAPEUTIC RELEVANCE KOJO KWOFIE SAMUEL

Vladimir Bajic, Alan Christoffels
2011 unpublished
The data archived in HCVpro can be utilized to support protein-protein interaction network-based candidate HCC gene prioritization for possible validation by experimental biologists. v Declaration I declare  ...  genomics and molecular biology data, and cross-referenced links to canonical pathways and other essential biomedical databases.  ...  BioGRID access tools, namely BioGRID REST Service, BiogridPlugin2 and BioGRID WebGraph(Winter et al., 2011).  ... 
fatcat:dxh5kptlxfdojbqc7dngtunu4a

DEVELOPMENT OF A HEPATITIS C VIRUS KNOWLEDGEBASE WITH COMPUTATIONAL PREDICTION OF FUNCTIONAL HYPOTHESIS OF THERAPEUTIC RELEVANCE KOJO KWOFIE SAMUEL

Vladimir Bajic, Alan Christoffels
2011 unpublished
The data archived in HCVpro can be utilized to support protein-protein interaction network-based candidate HCC gene prioritization for possible validation by experimental biologists. v Declaration I declare  ...  genomics and molecular biology data, and cross-referenced links to canonical pathways and other essential biomedical databases.  ...  BioGRID access tools, namely BioGRID REST Service, BiogridPlugin2 and BioGRID WebGraph(Winter et al., 2011).  ... 
fatcat:khbuvbkjujbk3dvhoinrnwxqq4