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BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID
2016
Database: The Journal of Biological Databases and Curation
Preserved Fulltext
BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID. ...
Acknowledgements The authors would like to thank Cecilia Arighi for providing resources for the user questionnaire. ...
Following the success of BioC in BioCreative IV, the BioCreative V BioC track addressed a collaborative task to build an assistant system for BioGRID curation. ...
doi:10.1093/database/baw121
pmid:27589962
pmcid:PMC5009341
fatcat:bqe4o77fizadhf5e3xese3i23y
Overview of the interactive task in BioCreative V
2016
Database: The Journal of Biological Databases and Curation
Preserved Fulltext
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The proposed curation tasks are user-centric and formally evaluated by biocurators. In BioCreative V IAT, seven TM systems and 43 biocurators participated. ...
The BioCreative Interactive task (IAT) is a track designed for exploring user-system interactions, promoting development of useful TM tools, and providing a communication channel between the biocuration ...
Acknowledgements We would like to acknowledge all the users and team members who have participated in this activity throughout BioCreative. Conflict of interest. None declared. ...
doi:10.1093/database/baw119
pmid:27589961
pmcid:PMC5009325
fatcat:ldpn6gjxircjlibqtysi57cztq
BioCreative-IV virtual issue
2014
Database: The Journal of Biological Databases and Curation
Preserved Fulltext
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We would like to thank the the BioCreative User Advisory Group and the task co-organizers Donald Comeau, Rezarta Islamaj Dogan, Obdulia Rabal, Julen Oyarzabal, Allan Davis, Carolyn Mattingly, Kimberly ...
Acknowledgments This issue is dedicated to the memory of our friend and colleague Phoebe Roberts who contributed significantly to the BioCreative effort in the past years. ...
Over the years, BioCreative has collaborated with curators from a variety of databases, including Gene Ontology Annotation (6), IntAct (7), MINT (8), BioGRID (9), Flybase (10), Mouse Genome Database (11 ...
doi:10.1093/database/bau039
pmid:24852177
pmcid:PMC4030502
fatcat:ov6v6jhv3vdinasqvot5zrm5cu
NTTMUNSW BioC modules for recognizing and normalizing species and gene/protein mentions
2016
Database: The Journal of Biological Databases and Curation
Preserved Fulltext
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Database URL: https://sites.google.com/site/hjdairesearch/Projects/isn-corpus V C The Author(s) ...
developed for processing full-text articles. ...
Acknowledgements The authors would like to thank all of the organizers of BioCreative 2015. The authors also would like to thank the two collaborating annotators, Ms. Hui-Jou Chou and Mr. ...
doi:10.1093/database/baw111
pmid:27465130
pmcid:PMC4962763
fatcat:ygvd3ryqyvg7zpeodhht3cfqru
Overview of the Interactive Task in BioCreative V
2015
Preserved Fulltext
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The tasks proposed are user-centric and formally evaluated by biocurators. In BioCreative V IAT, seven TM systems and 43 biocurators participated. ...
The tasks proposed are user-centric and formally evaluated by biocurators. In BioCreative V IAT, seven TM systems and 43 biocurators participated. ...
BioCreative is partially funded by NIH/NIGMS R13-GM109648-01A1; DOE: DE-SC0010838; NIH Intramural Research Program, National Library of Medicine. ...
doi:10.5167/uzh-116471
fatcat:elfvz7vs3zcx3obt33nak26rii
PIPE: a protein–protein interaction passage extraction module for BioCreative challenge
2016
Database: The Journal of Biological Databases and Curation
Preserved Fulltext
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In this article, we propose PIPE, an interaction pattern generation module used in the Collaborative Biocurator Assistant Task at BioCreative V (http://www.biocreative.org/) to capture frequent protein-protein ...
PIPE: a protein-protein interaction passage extraction module for BioCreative challenge. ...
To this end, we proposed an interaction pattern generation approach for acquiring PPI patterns, which was utilized in the Collaborative Biocurator Assistant Task at BioCreative V. ...
doi:10.1093/database/baw101
pmid:27524807
pmcid:PMC4983456
fatcat:t54qwjehhzbafhdnixnpp72k5a
EMBnet.journal 18 Suppl. B
2012
EMBnet journal
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Carlo Bernasconi and the Collegio Ghislieri in Pavia for their active support. ...
These biocurators provided us with their average time needed for curation without support on the same task. ...
Voorhees E (2001) Overview of the QA Track. In Proceedings of the TREC-10 Conference. NIST, Gaithersburg. 2001:157-165. 16. ...
doi:10.14806/ej.18.b.592
fatcat:wlwsmbdlfzbjtk7vyhiabdov6q