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Development of an agile knowledge engineering framework in support of multi-disciplinary translational research

Tara B Borlawsky, Rakesh Dhaval, Shannon L Hastings, Philip R O Payne
2009 Summit on translational bioinformatics  
among administrative, basic science, clinical and research computing systems, both internally and among the translational research community at-large, through the integration of domain-specific standard  ...  To help meet this goal, the Ohio State University Center for Clinical and Translational Science has launched a knowledge management initiative that is focused on facilitating widespread semantic interoperability  ...  Protégé is a standards-based system that implements a rich set of knowledge-modeling structures, including UPML.  ... 
pmid:21347164 pmcid:PMC3041563 fatcat:ct3ogdroqfbbveqmzkfmpeizpa

One Size Fits All: A Conceptual Data Model for Any Approach to Terminology [article]

Giorgio Maria Di Nunzio, Federica Vezzani
2021 arXiv   pre-print
We will analyse the onomasiological and semasiological approaches, the ontoterminology paradigm, and the frame-based model, and we will draw the consequences in terms of the conceptual data model.  ...  We will use the Entity-Relationship (ER) diagram as our tool for the conceptual data model of the problem and to express the associations between the objects of the study.  ...  In our design of the conceptual data model, the core data structure is the object that can be accessed and the "approaches" are only a different view of the same data.  ... 
arXiv:2112.06562v1 fatcat:55mwxcu4xfh33o5h3laf6s44wy

Ontology Matching: An Ultimate Solution for Semantic Interoperability in Healthcare

Olaronke Iroju, Abimbola Soriyan, Ishaya Gambo
2012 International Journal of Computer Applications  
The healthcare domain is a complex domain which lacks a unified terminological set, most especially in clinical cases.  ...  Ontologies provide a source of shared and precisely defined terms, resulting in interoperability by knowledge sharing and reuse.  ...  It is based on a semantically sound model of clinical terminology known as the GALEN COding REference (CORE) model [18] .  ... 
doi:10.5120/8325-1707 fatcat:k2v2ojntfvevnji4tv377ju5uu

Some Tools and Methodologies for Domain Ontology Building

Aldo Gangemi
2003 Comparative and Functional Genomics  
It performs basic and applied research on the ontological foundations of conceptual modelling, exploring the role of ontologies in different fields, such as knowledge representation, knowledge engineering  ...  Overview The Laboratory for Applied Ontology (OntoLab) is a distributed structure (Rome and Trento) of the Institute of Cognitive Sciences and Technology (a section of the Italian National Research Council  ...  heterogeneous systems (the semantic web being a case), as well as in building models of control systems.  ... 
doi:10.1002/cfg.242 pmid:18629089 pmcid:PMC2447375 fatcat:uxouvrob3fhszmneko6umcbx54

Global viewing of heterogeneous data sources

S. Castano, V. De Antonellis
2001 IEEE Transactions on Knowledge and Data Engineering  
Global views are defined to provide a unified representation of the information in the different sources by analyzing conceptual schemas associated with them and resolving possible semantic heterogeneity  ...  AbstractÐThe problem of defining global views of heterogeneous data sources to support querying and cooperation activities is becoming more and more important due to the availability of multiple data sources  ...  ACKNOWLEDGMENTS The authors would like to thank the Italian Information Systems Authority for the Public Administration for providing database schemas used in the experiments.  ... 
doi:10.1109/69.917566 fatcat:zt6ulbmvvbcrhdlzg35tfek3ea

Phenomenological Ontology Guided Conceptual Modeling for Enterprise Information Systems [chapter]

Tomas Jonsson, Håkan Enquist
2018 Msphere  
In a model driven information system, the model directly defines the structure of data presented to its users and should therefore be founded in users knowledge or perception of reality.  ...  This paper describes a draft for a phenomenological ontology for modeling executable conceptual models in accordance with the infological equation.  ...  ) t = time available to interpret data When implemented appropriately, a semantic consistency will be achieved between minds of actors, codified concepts, terminology and data with the factual data management  ... 
doi:10.1007/978-3-030-01391-2_7 fatcat:a7ocsmm2qraurgigqcugrpyxcq

An ontological framework for the formalization, organization and usage of TCM-Knowledge

Hai Long, Yan Zhu, Lirong Jia, Bo Gao, Jing Liu, Lihong Liu, Heinrich Herre
2019 BMC Medical Informatics and Decision Making  
The traditional Chinese Medicine Language System (TCMLS) is a large-scale terminology system, developed from 2002 on by the Institute of Information of Traditional Chinese Medicine (IITCM).  ...  Its top-level framework, called TCMLS-semantic network (SN), provides an important basis for the standardization and mapping of traditional Chinese Medicine (TCM) terminology systems.  ...  Availability of data and materials The data that support the findings of this study are available from the corresponding author on request.  ... 
doi:10.1186/s12911-019-0760-9 pmid:30961578 pmcid:PMC6454592 fatcat:nosmkkx4ivhkpg6la5xyhzdtju

Knowledge-based integration of industrial plant models

Lisa Abele, Stephan Grimm
2013 IECON 2013 - 39th Annual Conference of the IEEE Industrial Electronics Society  
Furthermore, we suggest to instantiate this conceptual modelling approach on a semantic technology stack featuring semantic data representation based on RDF and web-based plant navigation in a semantic  ...  To provide plant engineers in different roles with an integrated view on engineering data, we propose a conceptual modelling approach based on MOF layering for representing plant knowledge across multiple  ...  ACKNOWLEDGMENT This research was funded in part by the German Federal Ministry of Education and Research under grant number 01IA11001. The responsibility for this publication lies with the authors.  ... 
doi:10.1109/iecon.2013.6699842 dblp:conf/iecon/AbeleG13 fatcat:mnw7gnmhwzddjbc5zldhsfqs2a

Practical Context Transformation for Information System Interoperability [chapter]

Holger Wache, Heiner Stuckenschmidt
2001 Lecture Notes in Computer Science  
We argue that both approaches supplement each other and develop a unifying theory of context transformation.  ...  Using a real-world example, we compare two practical approaches for context transformation one based on transformation rule, the other of re-classification of information entities in a different terminological  ...  In case of simple values the type slot contains the basic data type. Templates with attributes can represent tables (relations) in a relational data structure model.  ... 
doi:10.1007/3-540-44607-9_28 fatcat:q7cijuoqzzfqjfhqgvtecix2da

Ontology based Scene Creation for the Development of Automated Vehicles [article]

Gerrit Bagschik, Till Menzel, Markus Maurer
2018 arXiv   pre-print
This contribution reviews ontologies as knowledge-based systems in the field of automated vehicles, and proposes a generation of traffic scenes in natural language as a basis for a scenario creation.  ...  Expert knowledge modeled for computer aided processing may help for the purpose of providing a wide range of scenarios.  ...  ACKNOWLEDGMENT We would like to thank the project members of the projects PEGASUS and aFAS funded by the German Federal Ministry for Economic Affairs and Energy for the productive discussions and the feedback  ... 
arXiv:1704.01006v5 fatcat:4orbpjuzfjcvjfjnlsvwoor42a

Transforming Multidisciplinary Customer Requirements to Product Design Specifications

Xiao-Jie Ma, Guo-Fu Ding, Sheng-Feng Qin, Rong Li, Kai-Yin Yan, Shou-Ne Xiao, Guang-Wu Yang
2017 Chinese Journal of Mechanical Engineering  
formed into a standardization process from a system and software engineering point of view [2] .  ...  Customer requirement modeling thus becomes a highly significant part of a product development process and it also has been a research topic for years and used in the field of system and software development  ...  conceptual design stage for further analysis as in [30] , which proposed the P-B-S model and developed a vector-based mapping tool to realize the mapping of PDS to conceptual design schemes.  ... 
doi:10.1007/s10033-017-0181-6 fatcat:4xqgn3ot55eqridu3j7mcumfbm

Knowledge-Based Approach for Military Mission Planning and Simulation [chapter]

Ryszard Antkiewicz, Mariusz Chmielewski, Tomasz Drozdowski, Andrzej Najgebauer, Jarosaw Rulka, Zbigniew Tarapata, Roman Wantoch-Rekowski, Dariusz Pierzcha
2012 Advances in Knowledge Representation  
Acknowledgements This work was partially done within ATHENA (Asymetric Threat Environment Analysis) supported and funded by 20 cMS within the Joint Investment Program of Force Protection, contacted by  ...  the EDA, under the call Mission Planning/Training in an asymmetric environment and secured Tactical Wireless Communications.  ...  ;  definition of uniform naming conventions for generated semantic model elements based on relational model predecessors unifying the element vocabulary;  development of additional business rules validation  ... 
doi:10.5772/37124 fatcat:5raxg7yf2fenlnmisletom5bui

Semantic Health Knowledge Graph: Semantic Integration of Heterogeneous Medical Knowledge and Services

Longxiang Shi, Shijian Li, Xiaoran Yang, Jiaheng Qi, Gang Pan, Binbin Zhou
2017 BioMed Research International  
In this paper, we explore a novel model to organize and integrate the TMK into conceptual graphs.  ...  With the explosion of healthcare information, there has been a tremendous amount of heterogeneous textual medical knowledge (TMK), which plays an essential role in healthcare information systems.  ...  Acknowledgments The authors thank Yaoping He from Health and Family Planning Commission of Wenzhou, China, for providing the domain knowledge and expert advices.  ... 
doi:10.1155/2017/2858423 pmid:28299322 pmcid:PMC5337312 fatcat:7d2sffyl4bfstirh3kwlinooai

Between Galileo and Darwin, or Towards a Unified Mode of Idealization in Cognitive Linguistics

Ariadna Strugielska
2016 Cognitive Studies | Études cognitives  
Between Galileo and Darwin, or Towards a Unified Mode of Idealization in Cognitive LinguisticsThe aim of this paper is to demonstrate that Cognitive Linguistics is in need of a coherent model through which  ...  reveals a lack of uniformity in the models proposed.On the whole, generalizations in Cognitive Linguistics are conducted in a manner reflecting the basic commitments of the approach, and hence the idealized  ...  Acknowledgment This work was supported by a core funding for statutory activities from the Polish Ministry of Science and Higher Education.  ... 
doi:10.11649/cs.2016.015 fatcat:z3p46qza5rbhje42yj3mnj4354

Metamodeling for Community Coordinated Multimedia and Experience on Metamodel-Driven Content Annotation Service Prototype

Jiehan Zhou, Mika Rautiainen, Mika Ylianttila
2008 2008 IEEE Congress on Services Part II (services-2 2008)  
This paper aims to design and develop the CCM metamodel. A generic terminology for CCM metamodeling is developed.  ...  Community coordinated multimedia vision raises the challenges of multimedia content creation, interpretation, exchange, and consumption over a large range of heterogeneous services, terminals and networks  ...  Center of Finland and and Marija Bjekovic from the Centre Henri Tudor of Luxembourg for the helpful discussion on metamodeling.  ... 
doi:10.1109/services-2.2008.31 dblp:conf/services/ZhouRY08 fatcat:ogwt2orjjvby5byaf23ziunm34
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