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BLAST2GENE: a comprehensive conversion of BLAST output into independent genes and gene fragments

M. Suyama, D. Torrents, P. Bork
<span title="2004-03-22">2004</span> <i title="Oxford University Press (OUP)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/wmo54ba2jnemdingjj4fl3736a" style="color: black;">Bioinformatics</a> </i> &nbsp;
of all independent copies along the genomic fragment.  ...  BLAST2GENE is a program that allows a detailed analysis of genomic regions containing completely or partially duplicated genes.  ...  METHODS AND IMPLEMENTATION The input to BLAST2GENE is an output of a BLAST search.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/bioinformatics/bth172">doi:10.1093/bioinformatics/bth172</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/15037510">pmid:15037510</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/jvrxbgfg3fhvfbzxxngq2oixaa">fatcat:jvrxbgfg3fhvfbzxxngq2oixaa</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180727183844/https://watermark.silverchair.com/bth172.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAcAwggG8BgkqhkiG9w0BBwagggGtMIIBqQIBADCCAaIGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM75-b59Q6ju9EMQ1GAgEQgIIBc7HVf26vcXUuDeHpbcmvTav09ZOiJYFHcBR8UyIEc8oh0UpBlajTCvOfIEGZsgjqfN7xPaJ8s4CD9iYUVF5BYuX81jf0kpTqOU4cpk3D148YbSGenOes_Gr8cUsB2TxEDRTm-ZqqBoB8TrSn0GGVhLOqtVf9QKFCq61TfYyWhB38BYeXRNwEEthLS-Ay8blAA-6ChT_GpXKIKZhGAowYm1rlmRlGnkC4fctD1NQrw3_0JMEKGW4WDA3W5q4nsyqE9JXPUZDFlzwdgxB-IDMytctjQ0sl0d4zxSkKom6GX5uybUB8x8MAwRjfU5rU7q8Yy_MLjwYDacOrrC8cuk08rYJ7XIaMqbcEnNT8ilZB9XewLQK0cJ9daiy8-yZClgGyjgAuOF7kfSUWdzsvtGrAZBjywP722yTqhkBWyhJMu_9woQpSITvNB7LUa208S-3NgR5pAZboO96TikQNx_kpCRd7DkqJvcUWFtrjQSzPh9wUF1_l" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/bb/74/bb74c7d5d5d5e1299b167231421427c17282fdb7.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/bioinformatics/bth172"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> oup.com </button> </a>

BLAST2GENE: a comprehensive conversion of BLAST output into independent genes and gene fragments

M. Suyama
<span title="2004-04-01">2004</span> <i title="Oxford University Press (OUP)"> <a target="_blank" rel="noopener" href="https://fatcat.wiki/container/4r72gbmtcrde5no3fwwogjs3cu" style="color: black;">Computer applications in the biosciences : CABIOS</a> </i> &nbsp;
of all independent copies along the genomic fragment.  ...  BLAST2GENE is a program that allows a detailed analysis of genomic regions containing completely or partially duplicated genes.  ...  METHODS AND IMPLEMENTATION The input to BLAST2GENE is an output of a BLAST search.  ... 
<span class="external-identifiers"> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/bioinformatics/bth225">doi:10.1093/bioinformatics/bth225</a> <a target="_blank" rel="external noopener" href="https://www.ncbi.nlm.nih.gov/pubmed/15037510">pmid:15037510</a> <a target="_blank" rel="external noopener" href="https://fatcat.wiki/release/rzez57nxefhvregdwky2qwvqwa">fatcat:rzez57nxefhvregdwky2qwvqwa</a> </span>
<a target="_blank" rel="noopener" href="https://web.archive.org/web/20180727183844/https://watermark.silverchair.com/bth172.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAcAwggG8BgkqhkiG9w0BBwagggGtMIIBqQIBADCCAaIGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM75-b59Q6ju9EMQ1GAgEQgIIBc7HVf26vcXUuDeHpbcmvTav09ZOiJYFHcBR8UyIEc8oh0UpBlajTCvOfIEGZsgjqfN7xPaJ8s4CD9iYUVF5BYuX81jf0kpTqOU4cpk3D148YbSGenOes_Gr8cUsB2TxEDRTm-ZqqBoB8TrSn0GGVhLOqtVf9QKFCq61TfYyWhB38BYeXRNwEEthLS-Ay8blAA-6ChT_GpXKIKZhGAowYm1rlmRlGnkC4fctD1NQrw3_0JMEKGW4WDA3W5q4nsyqE9JXPUZDFlzwdgxB-IDMytctjQ0sl0d4zxSkKom6GX5uybUB8x8MAwRjfU5rU7q8Yy_MLjwYDacOrrC8cuk08rYJ7XIaMqbcEnNT8ilZB9XewLQK0cJ9daiy8-yZClgGyjgAuOF7kfSUWdzsvtGrAZBjywP722yTqhkBWyhJMu_9woQpSITvNB7LUa208S-3NgR5pAZboO96TikQNx_kpCRd7DkqJvcUWFtrjQSzPh9wUF1_l" title="fulltext PDF download" data-goatcounter-click="serp-fulltext" data-goatcounter-title="serp-fulltext"> <button class="ui simple right pointing dropdown compact black labeled icon button serp-button"> <i class="icon ia-icon"></i> Web Archive [PDF] <div class="menu fulltext-thumbnail"> <img src="https://blobs.fatcat.wiki/thumbnail/pdf/bb/74/bb74c7d5d5d5e1299b167231421427c17282fdb7.180px.jpg" alt="fulltext thumbnail" loading="lazy"> </div> </button> </a> <a target="_blank" rel="external noopener noreferrer" href="https://doi.org/10.1093/bioinformatics/bth225"> <button class="ui left aligned compact blue labeled icon button serp-button"> <i class="external alternate icon"></i> oup.com </button> </a>