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Automated 3D Neuron Tracing with Precise Branch Erasing and Confidence Controlled Back-Tracking
[article]
2017
bioRxiv
pre-print
The performance improvements comparing to the previous methods are mainly introduced by a more accurate estimation of the traced area and a novel confidence controlled back-tracking algorithm. ...
The traced areas are labelled to avoid duplicated tracing. An online confidence score is computed to decide if a tracing iteration should be stopped and discarded from the final reconstruction. ...
Acknowledgements We thank the BigNeuron community for providing the data and the discussions. ...
doi:10.1101/109892
fatcat:fr2kqi6ynvcezpaznlret6fcke
Whole-brain connectivity atlas of glutamatergic and GABAergic neurons in the mouse dorsal and median raphe nuclei
2021
eLife
We used viral tracing combined with fluorescence micro-optical sectioning tomography to generate a comprehensive whole-brain atlas of inputs and outputs of glutamatergic and GABAergic neurons in the DR ...
The glutamatergic and GABAergic neurons in the same raphe nucleus had divergent projection patterns with differences in critical brain regions. ...
Automated 3-D Neuron Tracing With Precise Branch Erasing and Confidence Controlled Back Trackinghttps://doi.org/10.1109/TMI.2018.2833420 IEEE Transactions on Medical Imaging 37 :2441–2452. ...
doi:10.7554/elife.65502
pmid:34792021
pmcid:PMC8626088
fatcat:am727gkcofflno3alkn7xfafbi
Experience-dependent trends in CA1 theta and slow gamma rhythms in freely behaving mice
2018
Journal of Neurophysiology
Come by the Plexon booth to see the latest tools for high channel neural recording, optogenetics, video based animal and behavior tracking, and offline data analysis. ...
Neuralynx provides the most advanced electrophysiology solutions with intuitive acquisition and analysis systems -designed to meet the specific performance and data quality demands of each experiment. ...
tracing and separation of neuronal trees. ...
doi:10.1152/jn.00472.2017
pmid:29070630
fatcat:p2qafk33bjb23nmk2bddfhsx6y
Compartment-specific tuning of hippocampal dendritic feature selectivity by intracellular Ca2+ release
[article]
2021
bioRxiv
pre-print
We combined electroporation of single CA1 pyramidal neurons, simultaneous imaging of dendritic and somatic activity during spatial navigation, optogenetic place field induction, and acute genetic augmentation ...
However, ICR has not been investigated in mammalian neurons in vivo. ...
Villegas for assistance piloting an immunoassay to validate conditional knockout strategy, and Drs. A. Nelson and M. Rossi for their invaluable comments on the manuscript. ...
doi:10.1101/2021.09.27.460811
fatcat:hv4abhc7nvexxibiajlywtytuq
Amygdala Allostasis and Early Life Adversity: Considering Excitotoxicity and Inescapability in the Sequelae of Stress
2021
Frontiers in Human Neuroscience
Early life adversity (ELA), such as child maltreatment or child poverty, engenders problems with emotional and behavioral regulation. ...
In this review, we attempt to connect past research studies to new findings with animal models of cellular and neurotransmitter mediators of stress buffering to extreme fear generalization onto testable ...
AUTHOR CONTRIBUTIONS Both authors contributed equally to the outlining, drafting, and writing of the manuscript. ...
doi:10.3389/fnhum.2021.624705
pmid:34140882
pmcid:PMC8203824
fatcat:7ha2ssu4xza63cb5uxjvorwgmq
30th Annual Computational Neuroscience Meeting: CNS*2021–Meeting Abstracts
2021
Journal of Computational Neuroscience
Currently, most functional models of neural activity are based on firing rates, while the most relevant signals for inter-neuron communication are spikes. ...
Kadakia with grants-1F32MH118700 and 1K99DC019397 and supporting T. Emonet with grant 2R01GM106189. ...
O14 On the role of arkypallidal and prototypical neurons for neural synchronization in the basal ganglia
Acknowledgements
This work was supported by NIH-NIBIB (R01-EB027584). ...
doi:10.1007/s10827-021-00801-9
pmid:34931275
pmcid:PMC8687879
fatcat:evpmmfpaivgpxdqpive5xdgmwu
Intelligent Edge-Embedded Technologies for Digitising Industry
[chapter]
2022
Intelligent Edge-Embedded Technologies for Digitising Industry
The series includes research monographs, edited volumes, handbooks and textbooks, providing professionals, researchers, educators, and advanced students in the field with an invaluable insight into the ...
Topics range from the theory and use of systems involving all terminals, computers, and information processors to wired and wireless networks and network layouts, protocols, architectures, and implementations ...
Acknowledgements Part of this work was partly funded by the German ministry of education and research (BMBF) under grant 16KIS1180K (FunKI) and 16KIS1012 (IRLG). ...
doi:10.13052/rp-9788770226103
fatcat:mgz277pmkbetvbpoaomoktzgzi
28th Annual Computational Neuroscience Meeting: CNS*2019
2019
BMC Neuroscience
Some efforts use neurons with intrinsic rich dynamics as observed in several experimental works of CPGs [2, 3]. ...
Activity from both the LP and PD neurons of the stomatogastric ganglion of a crab was recorded using intracellular electrodes and sent to a computer through a DAQ device. ...
branches and soma with thin branches. ...
doi:10.1186/s12868-019-0538-0
fatcat:3pt5qvsh45awzbpwhqwbzrg4su
The Fourth Paradigm – Data-Intensive Scientific Discovery
[chapter]
2012
Communications in Computer and Information Science
The F o u r T H Data-In t e n s I v e scIen t I f I c DIs c o v e r y P a r a d i g m MiCroSoF T reSe arCH REDMOND, WASHINGTON ...
And, of course, we thank Jim Gray, for inspiring us.
ACKN OWLE DG M E NTS ...
We also thank our families and colleagues for their support during the intensive editorial process. ...
doi:10.1007/978-3-642-33299-9_1
fatcat:etue636ubrandga5corvkx3d7u
Modelling of consciousness and interpretation of quantum mechanics
[article]
2018
arXiv
pre-print
It provides a model that is compatible with the assumptions of the first part and consistent with our daily conscious experience. ...
So, when the mind measures the random part of certain neurons in the brain, he goes himself within each of these possibilities. ...
I thank them for their attentive and benevolent listening. Their comments and questions led me to strengthen several ideas. ...
arXiv:1807.07669v1
fatcat:t6ua4owbdjdp5jor4snfyelqmy
Deliverable 5.1 Preliminary evaluation results and plan for proof-of-concept demonstrations
2022
Zenodo
It presents the validation activities, performance evaluations and functional assessment tests of all the NI-solutions developed in WP3 and WP4 to date. ...
The performance evaluation aims at meeting 9 target KPIs in well-defined scenarios, which are measured and assessed by developing 7 evaluations. ...
We chose a neural network with an input layer of 2000 neurons and an output layer of as many neurons as there are traffic classes. We considered 3 hidden layers with 40 neurons each. ...
doi:10.5281/zenodo.6801831
fatcat:rw77sldj3bf7lj5napxfxrj5mm
Artificial Intellgence – Application in Life Sciences and Beyond. The Upper Rhine Artificial Intelligence Symposium UR-AI 2021
[article]
2021
arXiv
pre-print
) and the University of Applied Sciences and Arts Northwestern Switzerland. ...
Topics of the conference are applications of Artificial Intellgence in life sciences, intelligent systems, industry 4.0, mobility and others. ...
Wetzel and T. Iraki for helpful comments and discussion. ...
arXiv:2112.05657v1
fatcat:wdjgymicyrfybg5zth2dc2i3ni
Artificial Intelligence
[article]
2018
Zenodo
In May 2017, Google revealed AutoML, an automated machine learning system that could create an artificial intelligence solution without the assistance of a human engineer. ...
IBM Cloud and Amazon Web Services (AWS) offer machine learning solutions that do not require AI developers. ...
X[2] an X [3] come back as false as well. ...
doi:10.5281/zenodo.5599649
fatcat:vyqr3zzw5rfzpp3zifezw7uzxq
Classifying Infected and Uninfected Red Blood Cell Images for Malaria Detection using Convolutional Neural Networks
2021
American Journal Of Advanced Computing
III FALL-DETECTION RESULTS OF K-NN ALGORITHM
Training on D
Training on D'
Precision
Recall
F1-score
Support
Precision
Recall
F1-score
Support
Standing
0.8
5
0.7
0
0.77
1511
0.71 ...
It is able to detect falls with 67% precision and 69% recall, although it has attained higher values for standing activity. Also, it has shown similar results on reduced training set D'. ...
doi:10.15864/ajac.2107
fatcat:cnqj7hzy6nbvlobtmrujhoy4bu
29th Annual Computational Neuroscience Meeting: CNS*2020
2020
BMC Neuroscience
by visual experience, and (iii) how patterns of neural activity in the zebrafish brain develop to facilitate precisely targeted hunting behaviour. ...
Deep RL offers a rich framework for studying the interplay among learning, representation and decision-making, offering to the brain sciences a new set of research tools and a wide range of novel hypotheses ...
Institute (Challenge grants to SJ), the Research Corporation for Science Advancement (a Cottrell SEED Award to TV), and the German Research Foundation (DFG grant #ME 1535/7-1 to RM), and the Foundation ...
doi:10.1186/s12868-020-00593-1
pmid:33342424
fatcat:edosycf35zfifm552a2aogis7a
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