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ArthropodaCyc: a CycADS powered collection of BioCyc databases to analyse and compare metabolism of arthropods
2016
Database: The Journal of Biological Databases and Curation
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ArthropodaCyc: a CycADS powered collection of BioCyc databases to analyse and compare metabolism of arthropods. ...
In this context, we present here ArthropodaCyc, a dedicated BioCyc collection of databases using the Cyc annotation database system (CycADS), allowing researchers to perform reliable metabolism comparisons ...
Acknowledgements The authors would like to thanks: Daniel Lawson (European Bioinformatics Institute, Cambridge, UK) for the hyperlinks to/from VectorBase (https://www.vectorbase.org/); Fabrice Legeai and ...
doi:10.1093/database/baw081
pmid:27242037
pmcid:PMC5630938
fatcat:dpq2cagvujb3hm2s7dg2xmjihe
Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome
2019
Genome Biology
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Building upon recent sequencing of hemipteran pests such as phloem-feeding aphids and blood-feeding bed bugs, we present the genome sequence and comparative analyses centered on the milkweed bug Oncopeltus ...
fasciatus, a seed feeder of the family Lygaeidae. ...
We also thank Oliver Niehuis (Albert Ludwig University, Freiburg, Germany) and Alexander Klassmann (University of Cologne, Germany) for discussions on k-mer and gene structure analyses, respectively, Sarah ...
doi:10.1186/s13059-019-1660-0
pmid:30935422
pmcid:PMC6444547
fatcat:srfxz2fihfbk7ffoqpjg4fhwfu
The transposable element-rich genome of the cereal pest Sitophilus oryzae
2021
BMC Biology
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S. oryzae has undergone a high gene expansion rate, when compared to other beetles. ...
Results We sequenced the Sitophilus oryzae genome using a combination of short and long reads to produce the best assembly for a Curculionidae species to date. ...
We compared S. oryzae metabolism to that of other arthropods available in the ArthropodaCyc [110] collection and we explored the metabolic exchanges between weevils and their endosymbionts. ...
doi:10.1186/s12915-021-01158-2
pmid:34749730
pmcid:PMC8576890
fatcat:u7aigt3j4fcvpg4wyxwevkxafu