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Software citation principles

Arfon M. Smith, Daniel S. Katz, Kyle E. Niemeyer
2016 PeerJ Computer Science  
Seinstra, Netherlands eScience Center Arfon Smith, GitHub (co-chair) Kaitlin Thaney, Mozilla Science Lab Ilian Todorov, Science and Technology Facilities Council Matt Turk, University of Illinois Miguel  ...  Smith et al. (2016), PeerJ Comput.  ...  The researcher needs to know which version was used, for Competing Interests Arfon M. Smith is an employee of GitHub, Inc., San Francisco, California. Author Contributions Arfon M.  ... 
doi:10.7717/peerj-cs.86 fatcat:ezkr3sa72fflndu7tjjh6i5koy

The demise of the filesystem and multi level service architecture [article]

William O'Mullane, Niall Gaffney, Frossie Economou, Arfon M. Smith, J. Ross Thomson, Tim Jenness
2019 arXiv   pre-print
(See also the decadal paper on Cloud infrastructure by Arfon Smith et. Al.) The catch Switching to an object store removes the filesystem bottle neck however it also removes the filesystem index.  ... 
arXiv:1907.13060v2 fatcat:44idxf3i7jc6bl2vdrawppm2ry

Introducing JOSS: The Journal of Open Source Software [article]

Arfon Smith, Lorena A. Barba, George Githinji, Melissa Gymrek, Kathryn Huff, Daniel S. Katz, Christopher Madan, Abigail Cabunoc Mayes, Kevin M Moerman, Kyle Niemeyer, Pjotr Prins, Karthik Ram (+4 others)
2017 Figshare  
M Smith orcid: 0000-0000-0000-1234 affiliation: 1 -name: Mickey Mouse orcid: 0000-0000-0000-1234 affiliation: 2 affiliations: -name: Space Telescope Science Institute index: 1 -name: Disney Inc  ...  $275 + ($1 × 200) + ($19 × 12)) / 100 = $3.51 Business model (2/2) article.md --- title: 'Fidgit: An ungodly union of GitHub and figshare' tags: -example -tags -for the paper authors: -name: Arfon  ... 
doi:10.6084/m9.figshare.5208151 fatcat:s3qlrvcylzhyvgx33mgjdi74vi

PLANET HUNTERS: ASSESSING THEKEPLERINVENTORY OF SHORT-PERIOD PLANETS

Megan E. Schwamb, Chris J. Lintott, Debra A. Fischer, Matthew J. Giguere, Stuart Lynn, Arfon M. Smith, John M. Brewer, Michael Parrish, Kevin Schawinski, Robert J. Simpson
2012 Astrophysical Journal  
. , 2008 Land et al. 2008) , the search for supernovae (Smith et al. 2011) , the identification of solar coronal mass ejections (Davis et al. 2012) , cataloging of star forming regions (Simpson et al  ... 
doi:10.1088/0004-637x/754/2/129 fatcat:xytzklqlybfcvfuro6xgy4lyma

Planet Four: Probing Springtime Winds On Mars By Mapping The Southern Polar Co2 Jet Deposits

Klaus-Michael Aye, Megan E. Schwamb, Ganna Portyankina, Candice J. Hansen, Adam McMaster, Grant R.M. Miller, Brian Carstensen, Christopher Snyder, Michael Parrish, Stuart Lynn, Chuhong Mai, David Miller (+2 others)
2018 Zenodo  
About 97% of all fans are below 100 m in length, with a median value of 24 m.  ...  median of 59 m for MY30.  ... 
doi:10.5281/zenodo.1475479 fatcat:7mqmlcxh3nb6lcxr6ixwdr6nwa

Galaxy Zoo: bar lengths in local disc galaxies★

Ben Hoyle, Karen. L. Masters, Robert C. Nichol, Edward M. Edmondson, Arfon M. Smith, Chris Lintott, Ryan Scranton, Steven Bamford, Kevin Schawinski, Daniel Thomas
2011 Monthly notices of the Royal Astronomical Society  
AC K N OW L E D G M E N T S The authors would like to thank an anonymous referee for comments which improve the paper.  ...  the lower panel, we see that the brightest galaxies (M r < −24) which have bars are more easily identified than the fainter galaxies (M r > −22).  ...  Almost all 3150 bars are significantly larger than the typical SDSS seeing of <2.5 arcsec (Smith et al. 2002) , only 28 are close to this value (<5) arcsec.  ... 
doi:10.1111/j.1365-2966.2011.18979.x fatcat:vzlaf2k4rngflbsp5k3aso3bsm

Small-scale structure in the interstellar medium: time-varying interstellar absorption towards κ Velorum

Keith T. Smith, Stephen J. Fossey, Martin A. Cordiner, Peter J. Sarre, Arfon M. Smith, Tom A. Bell, Serena Viti
2012 Monthly notices of the Royal Astronomical Society  
AC K N OW L E D G M E N T S The authors thank PATT for the award of UHRF time on the AAT and for T&S.  ...  However, there are no systematic differences in b values between species in component B, over a range m = 23 (Na I) to m = 40 (Ca I and Ca II).  ...  Preliminary results from these observations were presented by Smith (2010) ; they are superseded by the results presented here.  ... 
doi:10.1093/mnras/sts310 fatcat:2zsk3mxkbjfvrozgo43j7y2x4y

Galaxy Zoo: Mergers – Dynamical models of interacting galaxies

Anthony J. Holincheck, John F. Wallin, Kirk Borne, Lucy Fortson, Chris Lintott, Arfon M. Smith, Steven Bamford, William C. Keel, Michael Parrish
2016 Monthly notices of the Royal Astronomical Society  
simulation )T 2 simulation = a 3 (M actual )T 2 actual = a 3 (8) T actual = T simulation M simulation M actual . (9) For most of our systems, this can be simplified to T actual = T simulation √ m l , (  ...  However, Smith et al. (2010) found four distinct best-fitting models for the pair of galaxies NGC 7714/5.  ...  AC K N OW L E D G E M E N T S The authors would like to thank the thousands of members of Galaxy Zoo: Mergers for their help on the project.  ... 
doi:10.1093/mnras/stw649 fatcat:cwteigb24bczna2sa5342b5adq

Galaxy Zoo: bars in disc galaxies★

Karen L. Masters, Robert C. Nichol, Ben Hoyle, Chris Lintott, Steven P. Bamford, Edward M. Edmondson, Lucy Fortson, William C. Keel, Kevin Schawinski, Arfon M. Smith, Daniel Thomas
2010 Monthly notices of the Royal Astronomical Society  
r > −20 (black solid), −20 < M r < −21 (blue dotted), −21 < M r < −22 (green dashed) and M r < −22 (red dot-dashed).  ...  < z < 0.03, M g < −18.5.  ... 
doi:10.1111/j.1365-2966.2010.17834.x fatcat:2ceymtolvjba3pyslkdy3ybtle

Petabytes to Science [article]

Amanda E. Bauer, Eric C. Bellm, Adam S. Bolton, Surajit Chaudhuri, A.J. Connolly, Kelle L. Cruz, Vandana Desai, Alex Drlica-Wagner, Frossie Economou, Niall Gaffney, J. Kavelaars, J. Kinney, Ting S. Li (+13 others)
2019 arXiv   pre-print
SOFTWARE Contributors: Arfon Smith <arfon@stsci.edu>, Erik Tollerud <etollerud@stsci.edu>, Kelle Cruz, Stuart Mumford, Nirav Merchant, Gautham Narayan, Alex Drlica-Wagner Note: If you have come directly  ...  WORKFORCE & CAREER DEVELOPMENT Contributors: Dara Norman <dnorman@noao.edu>, Kelle Cruz, Vandana Desai, Britt Lundgren, Eric Bellm, Frossie Economou, Arfon Smith, Amanda Bauer, Brian Nord, Chad Schafer  ... 
arXiv:1905.05116v2 fatcat:lzi3j7hzk5crfbedgraa5ojwbi

Algorithms and Statistical Models for Scientific Discovery in the Petabyte Era [article]

Brian Nord, Andrew J. Connolly, Jamie Kinney, Jeremy Kubica, Gautaum Narayan, Joshua E. G. Peek, Chad Schafer, Erik J. Tollerud, Camille Avestruz, G. Jogesh Babu, Simon Birrer, Douglas Burke, João Caldeira (+23 others)
2019 arXiv   pre-print
The field of astronomy has arrived at a turning point in terms of size and complexity of both datasets and scientific collaboration. Commensurately, algorithms and statistical models have begun to adapt --- e.g., via the onset of artificial intelligence --- which itself presents new challenges and opportunities for growth. This white paper aims to offer guidance and ideas for how we can evolve our technical and collaborative frameworks to promote efficient algorithmic development and take
more » ... age of opportunities for scientific discovery in the petabyte era. We discuss challenges for discovery in large and complex data sets; challenges and requirements for the next stage of development of statistical methodologies and algorithmic tool sets; how we might change our paradigms of collaboration and education; and the ethical implications of scientists' contributions to widely applicable algorithms and computational modeling. We start with six distinct recommendations that are supported by the commentary following them. This white paper is related to a larger corpus of effort that has taken place within and around the Petabytes to Science Workshops (https://petabytestoscience.github.io/).
arXiv:1911.02479v1 fatcat:kqwomxs4e5b4lkxphubizr4f74

Galaxy Zoo: quantifying morphological indicators of galaxy interaction★

Kevin. R. V. Casteels, Steven P. Bamford, Ramin A. Skibba, Karen L. Masters, Chris J. Lintott, William C. Keel, Kevin Schawinski, Robert C. Nichol, Arfon M. Smith
2012 Monthly notices of the Royal Astronomical Society  
Formally, this is p(A ∩ M) = p(A|M) p(M) ( 1 ) = f (A) Q⊂M a∈ Q f (a) , (2) where Q are subsets of the set of answers M partitioned by question, and the a are the individual answers in Q.  ...  displays morphological features M.  ... 
doi:10.1093/mnras/sts391 fatcat:rv2rwvnfnzh73ji7y5ihvv66ii

Journal of Open Source Software (JOSS): design and first-year review

Arfon M. Smith, Kyle E. Niemeyer, Daniel S. Katz, Lorena A. Barba, George Githinji, Melissa Gymrek, Kathryn D. Huff, Christopher R. Madan, Abigail Cabunoc Mayes, Kevin M. Moerman, Pjotr Prins, Karthik Ram (+4 others)
2018 PeerJ Computer Science  
Arfon Smith is the founding editor-in-chief, and the founding editors are 39 Lorena A.  ...  Editor-in-chief 345 Arfon Smith stewarded the majority of articles published in the first year.  ... 
doi:10.7717/peerj-cs.147 pmid:32704456 pmcid:PMC7340488 fatcat:groqd7oapre3nhxebxrsvunxgy

Galaxy Zoo: morphological classifications for 120 000 galaxies inHSTlegacy imaging

Kyle W. Willett, Melanie A. Galloway, Steven P. Bamford, Chris J. Lintott, Karen L. Masters, Claudia Scarlata, B. D. Simmons, Melanie Beck, Carolin N. Cardamone, Edmond Cheung, Edward M. Edmondson, Lucy F. Fortson (+9 others)
2016 Monthly notices of the Royal Astronomical Society  
AC K N OW L E D G E M E N T S KW, MG, CS, MB, and LF gratefully acknowledge support from the US National Science Foundation Grant AST1413610.  ...  We also thank Jennifer Lotz for sharing her G-M 20 measurements for the AEGIS sample. We thank Coleman Krawczyk for his assistance in producing Fig. 4 .  ...  The effect on the redshifted images is simply an empirical addition to the magnitude of a galaxy of the form M = e × z + M, where M is the corrected magnitude and e is the evolutionary correction in magnitudes  ... 
doi:10.1093/mnras/stw2568 fatcat:garyifupenb3fpg623aadcqeqe

Galaxy Zoo: an independent look at the evolution of the bar fraction over the last eight billion years from HST-COSMOS★

Thomas Melvin, Karen Masters, Chris Lintott, Robert C. Nichol, Brooke Simmons, Steven P. Bamford, Kevin R. V. Casteels, Edmond Cheung, Edward M. Edmondson, Lucy Fortson, Kevin Schawinski, Ramin A. Skibba (+2 others)
2014 Monthly notices of the Royal Astronomical Society  
AC K N OW L E D G E M E N T S This work has been made possible by the participation of more than 86 000 volunteers of the Galaxy Zoo: Hubble project.  ...  Low-mass sample -10.0 ≤ log (M /M ) < 10.34 Intermediate-mass sample -10.34 ≤ log (M /M ) < 10.64 High-mass sample -log (M /M ) ≥ 10.64 p bar threshold f bar, 0 γ ≥0.3 0.39 ± 0.11 −0.020 ± 0.017  ...  /M ) > 10.0].  ... 
doi:10.1093/mnras/stt2397 fatcat:5qzry5oqdbev3iihwas323eec4
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