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Annotating Search Results from Web Databases

Yiyao Lu, Hai He, Hongkun Zhao, Weiyi Meng, Clement Yu
2013 IEEE Transactions on Knowledge and Data Engineering  
An annotation wrapper for the search site is automatically constructed and can be used to annotate new result pages from the same web database.  ...  An increasing number of databases have become web accessible through HTML form-based search interfaces.  ...  Such type of search engines is often referred as Web databases (WDB). A typical result page returned from a WDB has multiple search result records (SRRs).  ... 
doi:10.1109/tkde.2011.175 fatcat:2eyhxruqrbcwnl7iewfkck2zqm


K.Aparna .
2015 International Journal of Research in Engineering and Technology  
For the annotation of fresh search result from network search engines for different domains in databases we go to the usage of annotation wrapper.  ...  Commonly the data units which are retrieved from web reachable search engine database is normally prearranged into the end result pages vigorously for personage browsing.  ...  For a result page returned from the web database consists of several search result records (SRR's).  ... 
doi:10.15623/ijret.2015.0414005 fatcat:a46iv76ywvd6xk7s3onvebxt7i

Annotating Search Results from Web Databases using Alignment algorithm & different Annotators

Y Kapadnis, Akshay Gore, Hitesh Sonawane, Gokul Itnare, Ravindra Balak
International Research Journal of Engineering and Technology   unpublished
The number of web databases have become web assessible through search interfaces which is in HTML form.  ...  The Web Databases are accessed through HTML based search engine. The result returned from web database is in the form of Search Result Record (SRR). SRR contains text nodes and data units.  ...  In order to avoid such inconvenience, we are presenting Annotating Search results from web databases using Alignment, Clustering algorithm and applying different annotators.  ... 

Survey of Web Database Clustering Techniques

2016 International Journal of Science and Research (IJSR)  
Nowadays databases have become web accessible through HTML form-based search interfaces The data units returned are encoded into the result pages dynamically for human browsing.  ...  Author proposes some automated annotating approaches to improving search method on basis similarities in data units.  ...  Such type of search engines is often referred as Web databases(WDB). A typical result page returned from a WDB has multiple search result records(SRRs).  ... 
doi:10.21275/v5i2.nov161214 fatcat:byuitsutfndi7enfo27tweiy4e

Learning based Clustering for the Automatic Annotations from Web Databases

Richa Saxena, Sushil Kumar Chaturvedi
2015 International Journal of Computer Applications  
Although there are various techniques implemented for the access of the annotations of the search results from the web databases.  ...  The technique implemented provides high rate of information by providing high annotations search results from web databases.  ...  The proposed methodology implemented here for the searching of the annotations from the web databases.  ... 
doi:10.5120/19838-1692 fatcat:avnpqcbqyrf4jgfgxvssxf53dy

Equipped Search Results Using Machine Learning from Web Databases

Ahmed Mudassar Ali, M. Ramakrishnan
2015 Research Journal of Applied Sciences Engineering and Technology  
The reason is no relevance exists between the keyword and SRs (Search Results). A typical web page returned from a WDB has multiple Search Result Records (SRRs).  ...  Such types of databases are termed as Web Databases (WDB). Web databases have been frequently employed to search the products online for retail industry.  ...  Annotation is done at search result level. In this process, the query is received from the user. system searches the database.  ... 
doi:10.19026/rjaset.10.2487 fatcat:o36bqrngsbhefghbofyfx7klra

MetaboSearch: Tool for Mass-Based Metabolite Identification Using Multiple Databases

Bin Zhou, Jinlian Wang, Habtom W. Ressom, Narcis Fernandez-Fuentes
2012 PLoS ONE  
We have implemented a web-based software tool that enables simultaneous mass-based search against the four major databases, and the integration of the results.  ...  Since each one of these databases covers only a fraction of the metabolome, integration of the search results from these databases is expected to yield a more comprehensive coverage.  ...  Finally, the search results from individual database are merged through InChI keys.  ... 
doi:10.1371/journal.pone.0040096 pmid:22768229 pmcid:PMC3387018 fatcat:ljurb2hizjhtrc4gid3xfql5ym


Xirong Li, Xin-Jing Wang, Changhu Wang, Lei Zhang
2007 Proceedings of the 15th international conference on Multimedia - MULTIMEDIA '07  
Given an image (with initial annotations), SBIA first finds semantically/visually similar images via the search engine, and then mines representative keywords from the retrieved images.  ...  At the heart of the system lies a very large-scale image search engine which indexed three million Web images and supports both text and visual queries.  ...  It can efficiently find similar images from the 3 million image database within 20 milliseconds, and annotate the query image within 50 milliseconds on average.  ... 
doi:10.1145/1291233.1291344 dblp:conf/mm/LiWWZ07 fatcat:5xhcza2q25by3aa7eh6y7pmgxm

A Survey on Data Annotation for the Web Databases

Miss.Priyanka P.Boraste
2014 IOSR Journal of Computer Engineering  
to annotate new result records from the same web database.  ...  Web search engines are designed to search information in the web database and to return dynamic web pages.  ...  Acknowledgement I feel great pleasure in submitting this paper "A SURVEY ON DATA ANNOTATION FOR THE WEB DATABASES" ". I wish to Thank IOSR Journals for giving us such a wonderful opportunity.  ... 
doi:10.9790/0661-162116870 fatcat:3zyoclrc2batzfnda6lesqp4tu

Crowd Aided Web Search: Concept and Implementation

Chun-Hsiung Tseng
1970 ECTI Transactions on Computer and Information Technology  
Despite of the fact that theWeb is the largest database, comparing to relational databases, the set of search operations for the Web is still primitive.  ...  Although keyword-based search algorithms usually do their jobs well, they may sometimes yield weird results.  ...  Feedbacks will be used for ordering results returned from querying advanced information sources and will indirectly affects the order of results from the integrated generic Web search engine.  ... 
doi:10.37936/ecti-cit.201591.54408 fatcat:4q5ealfknbehdgpix2mdfpgi7q

CABRA: Cluster and Annotate Blast Results Algorithm

Pablo Mier, Miguel A. Andrade-Navarro
2016 BMC Research Notes  
to review all results from a similarity search.  ...  Basic local alignment search tool (BLAST) searches are frequently used to look for homologous sequences and to annotate a query protein, but the increasing size of protein databases makes it difficult  ...  Cluster and Annotate Blast Results Algorithm (CABRA) [4] uses this different approach, as it clusters the results of a search in a selected database, and not the database itself.  ... 
doi:10.1186/s13104-016-2062-y pmid:27129717 pmcid:PMC4851773 fatcat:ssbqgkkvnzelhp2xfhg6ii3xhi

TogoTable: cross-database annotation system using the Resource Description Framework (RDF) data model

Shin Kawano, Tsutomu Watanabe, Sohei Mizuguchi, Norie Araki, Toshiaki Katayama, Atsuko Yamaguchi
2014 Nucleic Acids Research  
Annotations are drawn from several biological databases that use the Resource Description Framework (RDF) data model.  ...  Because TogoTable uses RDF, it can integrate annotations from not only the reference database to which the IDs originally belong, but also externally linked databases via the LOD network.  ...  Because we used RDF features in TogoTable, annotations can be collected from a cross-database search.  ... 
doi:10.1093/nar/gku403 pmid:24829452 pmcid:PMC4086138 fatcat:6vvccmb2kjaufh7ypaa6sfxjyi

Web database query interface annotation based on user collaboration

Liu Wei, Lin Can, Meng Xiaofeng
2006 Wuhan University Journal of Natural Sciences  
And a user participation method is used to tune the result; user can answer "yes" or "no" for existing annotations, or manually annotate form elements.  ...  A vision based query interface annotation method is used to relate attributes and form elements in form-based web query interfaces, this method can reach accuracy of 82%.  ...  We call these online databases "Web Database". A study [1] estimated 43 000-96 000 such search sites (and 550 billion content pages) on the Web.  ... 
doi:10.1007/bf02829275 fatcat:wsqhdjhy3jbyti5wy75hdgs4km

The antiSMASH database, a comprehensive database of microbial secondary metabolite biosynthetic gene clusters

Kai Blin, Marnix H. Medema, Renzo Kottmann, Sang Yup Lee, Tilmann Weber
2016 Nucleic Acids Research  
Therefore, we developed the antiSMASH database, a simple but highly useful new resource to browse antiSMASH-annotated BGCs in the currently 3907 bacterial genomes in the database and perform advanced search  ...  However, so far, antiSMASH is limited to de novo computing results for user-submitted genomes and only partially connects these with BGCs from other organisms.  ...  The data are stored in a PostgreSQL database (https://www. Processed antiSMASH results are stored on disk and linked to from the web application where applicable.  ... 
doi:10.1093/nar/gkw960 pmid:27924032 pmcid:PMC5210647 fatcat:tp6kdrkib5delh5wpbsjiflyuq

KATANA: A web-based guide to public databases for Arabidopsis genomic information

Kentaro Yano, Tomoko Dansako, Nozomu Sakurai, Hideyuki Suzuki, Daisuke Shibata
2005 Plant Biotechnology  
Given that naming conventions often vary between databases and that the same genes can be annotated differently, we developed a web-based tool, KATANA (Kazusa Arabidopsis thaliana Annotation Abstract;  ..., to guide users searching for Arabidopsis genomic information to the relevant public databases from a single site.  ...  This in turn has resulted in the need to develop a tool with which these major databases can be queried from a single web site.  ... 
doi:10.5511/plantbiotechnology.22.225 fatcat:aruhgcgdprgpzdliw4xvakxbpa
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