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The NIH public access policy did not harm biomedical journals

A. Townsend Peterson, Paul E. Johnson, Narayani Barve, Ada Emmett, Marc L. Greenberg, Josh Bolick, Huijie Qiao
2019 PLoS Biology  
We show here that implementation of the NIH policy was associated with slightly elevated mortality rates and mildly depressed natality rates of biomedical journals, but that birth rates so exceeded death  ...  The policy is now 11 years old, yet no analysis has been presented to assess whether in fact this largest-scale US-based public access policy affected the vitality of the scholarly publishing enterprise  ...  Acknowledgments We thank Rebecca Orozco and Scott Hanrath for assistance at various stages in the process of deriving the data necessary for this analysis, Eric Shannon and Chong Xing for assistance with  ... 
doi:10.1371/journal.pbio.3000352 pmid:31644528 pmcid:PMC6808382 fatcat:vcdrv4d4vzhtbme5vyyjtkzl6e

Automated Research Impact Assessment: a new bibliometrics approach

Christina H. Drew, Kristianna G. Pettibone, Fallis Owen Finch, Douglas Giles, Paul Jordan
2016 Scientometrics  
The approach includes new statistics that science managers can use to benchmark contributions to research by funding source.  ...  In this article we review traditional bibliometric analyses, address challenges associated with them, and describe a new bibliometric analysis method, the Automated Research Impact Assessment (ARIA).  ...  over time.  ... 
doi:10.1007/s11192-015-1828-7 pmid:26989272 pmcid:PMC4791943 fatcat:p3boa3ncivgpfnuv2b2xm7s2sq

Analyzing Text and Social Network Data with Probabilistic Models [chapter]

Padhraic Smyth
2012 Lecture Notes in Computer Science  
individuals over time).  ...  The concluding part of the talk will focus more specifically on recent work with temporal social networks, specifically data in the form of time-stamped events between nodes (such as emails exchanged among  ...  His research interests include machine learning, data mining, pattern recognition, and applied statistics and he has published over 150 papers on these topics.  ... 
doi:10.1007/978-3-642-33460-3_5 fatcat:obkpf7hewjejfahtjpffasb3qq

Openaire2020 D10.2 - Clustering Algorithms

Omiros Metaxas, Theodoros Giannakopoulos
2016 Zenodo  
NIH & WT funded research to FP7.  ...  _Only funded publications, or NIH & WT funded research vs FP7)  ... 
doi:10.5281/zenodo.1257349 fatcat:urryukf52barnfmymb6noquzq4

Applying Data Analytics and Visualization to Assessing the Research Impact of the Cancer Cell Biology (CCB) Program at the University of North Carolina at Chapel Hill

Fei Yu, Barrie Hayes
2018 Journal of eScience Librarianship  
The visualization of the co-authorship network with time overlay provides an overview of the key authors' research activities over time.  ...  Conclusions: The bibliometric data analysis and visualizations produced for this project were able to provide quick insights to the administrators in terms of identified patterns, trends, and gaps of the  ...  When analyzing NIH-supported studies, iCite is a preferred bibliometric tool because it, unlike others, compares the research impact with NIH-funded research publications.  ... 
doi:10.7191/jeslib.2018.1123 fatcat:ytnhxolgqjc7nenw3sotta6dz4

Bibliometric Analysis of Electronic Cigarette Publications: 2003–2018

Michael Briganti, Cristine Delnevo, Leanne Brown, Shirin Hastings, Michael Steinberg
2019 International Journal of Environmental Research and Public Health  
Annual National Institutes of Health NIH funding for tobacco research mapped closely with the annual volume of e-cigarette publications.  ...  This study characterizes e-cigarette publication trends over the past 15 years via a bibliometric analysis.  ...  We mapped NIH tobacco funding to e-cigarette publications with a 5-year lag time.  ... 
doi:10.3390/ijerph16030320 pmid:30682767 pmcid:PMC6388121 fatcat:x2cssvpkibaarlvuest7q5r3ve

Who shares? Who doesn't? Bibliometric factors associated with open archiving of biomedical datasets

Heather A Piwowar
2010 Proceedings of the American Society for Information Science and Technology  
In particular, publishing in a journal with a relatively strong data sharing policy, receiving funding from many NIH grants, publishing in an open access journal, and having prior experience sharing gene  ...  In this study, I use bibliometric methods to understand the prevalence and patterns with which investigators publicly share their raw gene expression microarray datasets after study publication.  ...  or reporting bias, and the analysis can be repeated over time with little additional effort.  ... 
doi:10.1002/meet.14504701413 fatcat:aegkn4ry7bbwbpbvyldjsxv6ja

Relative Citation Ratio (RCR): A new metric that uses citation rates to measure influence at the article level [article]

Bruce Ian Hutchins, Xin Yuan, James M Anderson, George M Santangelo
2015 biorxiv/medrxiv   pre-print
To illustrate one application of our method, we analyzed 88,835 articles published between 2003 and 2010, and found that the National Institutes of Health awardees who authored those papers occupy relatively  ...  We demonstrate that the values generated by this method strongly correlate with the opinions of subject matter experts in biomedical research, and suggest that the same approach should be generally applicable  ...  Analyzed the data: BIH GMS. Contributed reagents/materials/analysis tools: BIH XY. Wrote the paper: BIH XY JMA GMS.  ... 
doi:10.1101/029629 fatcat:ujj3wow6kjc3ppscwr6m3pzk7i

Relative Citation Ratio (RCR): A New Metric That Uses Citation Rates to Measure Influence at the Article Level

B. Ian Hutchins, Xin Yuan, James M. Anderson, George M. Santangelo, David L Vaux
2016 PLoS Biology  
To illustrate one application of our method, we analyzed 88,835 articles published between 2003 and 2010 and found that the National Institutes of Health awardees who authored those papers occupy relatively  ...  We demonstrate that the values generated by this method strongly correlate with the opinions of subject matter experts in biomedical research and suggest that the same approach should be generally applicable  ...  Analyzed the data: BIH GMS. Contributed reagents/materials/analysis tools: BIH XY. Wrote the paper: BIH XY JMA GMS.  ... 
doi:10.1371/journal.pbio.1002541 pmid:27599104 pmcid:PMC5012559 fatcat:mhh6uqjck5hqxlewwx7m2ukksq

Visualization of Multidimensional Data in Nursing Science

Sharron L. Docherty, Allison Vorderstrasse, Debra Brandon, Constance Johnson
2016 Western Journal of Nursing Research  
We describe a brief history of visual analysis, processes involved in scientific visualization, and opportunities and challenges in the use of visualization methods.  ...  Scientific visualization can play a crucial role in helping nurse scientists make sense of the structure and underlying patterns in their data to answer vital questions in the field.  ...  Acknowledgments Funding The author(s) disclosed receipt of the following financial support for the research, authorship, and/or publication of this article: Research reported in this publication was  ... 
doi:10.1177/0193945916672448 pmid:27756850 pmcid:PMC5395350 fatcat:4hajzugy2zhznggco35csvucme

A cross-institutional analysis of the effects of broadening trainee professional development on research productivity

Patrick D. Brandt, Susi Sturzenegger Varvayanis, Tracey Baas, Amanda F. Bolgioni, Janet Alder, Kimberly A. Petrie, Isabel Dominguez, Abigail M. Brown, C. Abigail Stayart, Harinder Singh, Audra Van Wart, Christine S. Chow (+15 others)
2021 PLoS Biology  
Metrics were analyzed from 10 NIH BEST awardee institutions to address this concern, using time to degree and publication records as measures of efficiency and productivity.  ...  The National Institutes of Health (NIH) funded academic institutions to design innovative programming to enable this professional development through a mechanism known as Broadening Experiences in Scientific  ...  Acknowledgments The authors would like thank Christopher Peña and Michael Friedlander for support of their institutional BEST projects; Jacek Buczny for advising on data analysis; and Patricia Labowski  ... 
doi:10.1371/journal.pbio.3000956 pmid:34264929 pmcid:PMC8282014 fatcat:vkmdx7e6gbhg5ayzunbb3v2x4u

Toward predicting research proposal success

Kevin W. Boyack, Caleb Smith, Richard Klavans
2017 Scientometrics  
Citation analysis and discourse analysis of 369 R01 NIH proposals are used to discover possible predictors of proposal success.  ...  Implications associated with the analysis of proposal data are discussed.  ...  Johnson (2008) showed how modeling of differences in NIH reviewer scoring patterns along with transfer of information from panels to the final ratings group could change set of funded applications by  ... 
doi:10.1007/s11192-017-2609-2 fatcat:6v2cyjzxoveo5ne4qtbbuflmoi

Scientific Prizes and the Extraordinary Growth of Scientific Topics [article]

Ching Jin, Yifang Ma, Brian Uzzi
2021 arXiv   pre-print
Our longitudinal analysis of nearly all recognized prizes worldwide and over 11,000 scientific topics from 19 disciplines indicates that topics associated with a scientific prize experience extraordinary  ...  Funding do not account for a prizewinning topic's growth.  ...  NIH subsample analysis (both prizewinning and peer topics are NIH funded). This figure reports a new analysis where both the prizewinning and peer topics are NIH funded topics.  ... 
arXiv:2012.09269v2 fatcat:nnsnrz7trbdljko7eai555bn6a

ProvCaRe Semantic Provenance Knowledgebase: Evaluating Scientific Reproducibility of Research Studies

Joshua Valdez, Matthew Kim, Michael Rueschman, Vimig Socrates, Susan Redline, Satya S Sahoo
2018 AMIA Annual Symposium Proceedings  
As part of the NIH Big Data to Knowledge (BD2K)-funded data provenance project, we have developed a new informatics framework called Provenance for Clinical and Healthcare Research (ProvCaRe) to extract  ...  A key component of the NIH Rigor and Reproducibility guidelines is the recording and analysis of "provenance" information, which describes the origin or history of data and plays a central role in ensuring  ...  This work is supported in part by the NIH-NIBIB Big Data to Knowledge (BD2K) 1U01EB020955 grant, NSF grant# 1636850, and the NIH-NHLBI R24HL114473 grant.  ... 
pmid:29854241 pmcid:PMC5977728 fatcat:qsxwi5zjrfashfzdk3ovpvnhtm

Public sharing of research datasets: A pilot study of associations

Heather A. Piwowar, Wendy W. Chapman
2010 Journal of Informetrics  
with increased data sharing behavior in multivariate logistic regression analysis.  ...  In this pilot study, we analyzed whether data sharing frequency was associated with funder and publisher requirements, journal impact factor, or investigator experience and impact.  ...  Assumptions about proportions of direct and indirect funding costs may have been incorrect, leading to over-or underestimations of the applicability of NIH mandates.  ... 
doi:10.1016/j.joi.2009.11.010 pmid:21339841 pmcid:PMC3039489 fatcat:7xmqognpdnhj7f4qe6dqaa6yva
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