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An ontology based personal exposure history

Stacy A. Doore, Kate Beard, Carol Bult
2010 Proceedings of the ACM international conference on Health informatics - IHI '10  
This paper describes the development of an ontology for a personal exposure history (PEH) that specifies explicit relationships between persons and locations and locations and putative environmental toxic  ...  Data sources for an exposure history might include numerous governmental, institutional and community records which document people's relationships with various locations.  ...  ONTOLOGY BASED PERSONAL EXPOSURE HISTORY FRAMEWORK The conceptual detail for a personal exposure history ontology can be complex, and the intent of this paper is not to cover all these complexities but  ... 
doi:10.1145/1882992.1883097 dblp:conf/ihi/DooreBB10 fatcat:ek2onstw7bebbp3h4jui4ziwhq

First Steps of Asthma Management with a Personalized Ontology Model

Hicham Ajami, Hamid Mcheick, Catherine Laprise
2022 Future Internet  
An ontology-driven model supported by Semantic Web Rule Language (SWRL) medical rules is proposed to provide personalized care for an asthma patient by identifying the risk factors and the development  ...  This paper presents a new personalized approach to manage asthma.  ...  Personalized context awareness can be realized using an ontological model for abstraction.  ... 
doi:10.3390/fi14070190 fatcat:rkoahwbohnfaxndadjprxgvbwu

The Environmental Conditions, Treatments, and Exposures Ontology (ECTO): Connecting Toxicology and Exposure to Human Health and Beyond

Lauren Chan, Anne Thessen, William D. Duncan, Nicolas Matentzoglu, Charles Schmitt, Cynthia Grondin, Nicole Vasilevsky, Julie McMurry, Peter Robinson, Christopher J. Mungall, Melissa Haendel
2022 Zenodo  
Introductory manuscript to present the Environmental Conditions, Treatments, and Exposures Ontology (ECTO).  ...  In this example, a person presented to a health care provider complaining of an ongoing runny nose, tears, and drooling in recent history with no known illness, and they report eating apples daily.  ...  Exposures modeled in ECTO are based on the upper level Exposure Ontology (ExO) 20 , while offering specific content such as an exposure to a chemical, an environmental condition, or a mixture of components  ... 
doi:10.5281/zenodo.6360645 fatcat:hfy2eldfhvclrkdjhzkr3bkqnm

A Novel Query Obfuscation Scheme with User Controlled Privacy and Personalization

Saraswathi Punagin, Arti Arya
2017 International Journal of Computer Applications  
These search engines use the information provided by users, in terms of their search history to build their "user profiles".  ...  To that effect this work is a novel approach towards providing a balance between privacy preservation and personalization by keeping the user in control of his privacy Vs personalization decisions.  ...  One way of doing this is by creating a user profile based on the user's search history.  ... 
doi:10.5120/ijca2017912733 fatcat:dmjaexloxncbddagammnija4ki

The Environmental Conditions, Treatments, and Exposures Ontology (ECTO): Connecting Toxicology and Exposure to Human Health and Beyond

Lauren Chan, Anne Thessen, William D. Duncan, Nicolas Matentzoglu, Charles Schmitt, Cynthia Grondin, Nicole Vasilevsky, Julie McMurry, Peter Robinson, Christopher J. Mungall, Melissa Haendel
2022 Zenodo  
Introductory manuscript to present the Environmental Conditions, Treatments, and Exposures Ontology (ECTO).  ...  In this example, a person presented to a health care provider complaining of an ongoing runny nose, tears, and drooling in recent history with no known illness, and they report eating apples daily.  ...  Exposures modeled in ECTO are based on the upper-level Exposure Ontology (ExO) 16 , while offering specific content such as an exposure to a chemical, an environmental condition, or a mixture of components  ... 
doi:10.5281/zenodo.6360321 fatcat:vaf2h4l72jffbd4aosodgz5uje

The Development and Applications of Food Knowledge Graphs in the Food Science and Industry [article]

Weiqing Min, Chunlin Liu, Leyi Xu, Shuqiang Jiang
2021 arXiv   pre-print
We first provide a brief introduction of knowledge graphs, and then review the evolution of food knowledge organization mainly from food classification, food ontology to food knowledge graphs.  ...  Representative applications of food knowledge graphs will be summarized with respect to new recipe development, food traceability, food data visualization, personalized dietary recommendation, food search  ...  Graph-based knowledge representation has a long history in AI.  ... 
arXiv:2107.05869v2 fatcat:shmaifcz6bf6zj2tze2k2uovpi

Semantic Modeling for Exposomics with Exploratory Evaluation in Clinical Context

Jung-wei Fan, Jianrong Li, Yves A. Lussier
2017 Journal of Healthcare Engineering  
The generated semantic model represents rich domain knowledge about exposure events (454 pairs of relations between exposure and outcome).  ...  Through selected ontological relations, we developed a template-driven approach to identifying exposome concepts from the Unified Medical Language System (UMLS).  ...  In terms of methodology, our semantic filtering based on relational template demonstrates a useful ontological approach for selecting task-specific entities of interest.  ... 
doi:10.1155/2017/3818302 pmid:29065591 pmcid:PMC5603127 fatcat:buel3novgjf5nmherygio6ijke

Towards an ontological theory of substance intolerance and hypersensitivity

William R. Hogan
2011 Journal of Biomedical Informatics  
Specifically, a substance intolerance is a disease whose pathological process(es) are realized upon exposure to a quantity of substance of a particular type, and this quantity would normally not cause  ...  Overall, however, the framework of the Ontology for General Medical Science (which uses Basic Formal Ontology as its uppermost level) was a more-than-adequate foundation on which to build the theory.  ...  For example, ICD-9-CM has 10 codes under the 3-digit header V14 Personal history of allergy to medicinal agents. The ICD-9-CM code V14.0 represents Personal history of allergy to penicillin.  ... 
doi:10.1016/j.jbi.2010.02.003 pmid:20152933 pmcid:PMC2888796 fatcat:ohzvn3s4engm3pwju5qn7vhj2q

Between History and Universality: Understanding Identity in the Public Sphere

Nisar Alungal Chungath
2020 Tattva - Journal of Philosophy  
On the one hand, there is a 'history' within which an identity is rooted and through which meaning-making is made possible, and on the other hand, every person aspires to be a 'universal' and recognition-worthy  ...  The ontological force of this argument aside, the paper demonstrates that reduction of an identity without crediting its aspiration for universality and consideration of universality without crediting  ...  Hoff rejects this view for disregarding the significance of 'history' for an identity in an attempt to impose on a person an ideal universality of bare humanity.  ... 
doi:10.12726/tjp.23.2 fatcat:ls23pjlxijc6fkoufddf6fty2m

Factic: Personalized Exploratory Search in the Semantic Web [chapter]

Michal Tvarožek, Mária Bieliková
2010 Lecture Notes in Computer Science  
We combine and extend personalization approaches, faceted browsers, graph-based visualization and tree-based history visualization in order to provide users with advanced information exploration and discovery  ...  We present our personalized exploratory browser Factic as a unique client-side tool for effective Semantic Web exploration.  ...  when working with an ontological repository [4] .  ... 
doi:10.1007/978-3-642-13911-6_44 fatcat:dfxcdogvmbhxhond7ltznlog7a

Measuring similarity between geospatial lifelines in studies of environmental health

Gaurav Sinha, David M. Mark
2005 Journal of Geographical Systems  
Clusters of similar geospatial lifelines represent individuals who have similar residential histories-and therefore represent people who are more likely to have had similar environmental exposure histories  ...  For migratory populations and diseases with long latency periods, people may change their residential location between time of exposure and onset of ill health.  ...  As noted earlier, trajectories are a special case of lifelines with a particular ontology, based on continuous motion, a property not found in residential histories.  ... 
doi:10.1007/s10109-005-0153-8 fatcat:37ske2mdejf5dkzbv2mo65k5ki

Adverse Childhood Experiences (ACEs) Ontology: A Resource for Mental Health Surveillance, Research, and Evaluation (Preprint)

Jon Hael Brenas, Eun Kyong Shin, Arash Shaban-Nejad
2019 JMIR Mental Health  
The ACEs Ontology provides a uniform and reusable semantic network and an integrated knowledge structure for mental health practitioners and researchers to improve ACEs' surveillance and evaluation.  ...  Adverse Childhood Experiences (ACEs), a set of negative events and processes that a person might encounter during childhood and adolescence, have been proven to be linked to increased risks of a multitude  ...  "Social Determinants of Health" (SDHs) are upstream factors that can affect Person and the exposure and manifestation of ACEs.  ... 
doi:10.2196/13498 pmid:31115344 pmcid:PMC6707574 fatcat:tnt2nlbfhrd4terly4j6sxqslu

"Existential Catastrophe Anxiety": Phenomenology of Fearful Emotions in a Subset of Service Users With Severe Mental Health Conditions

Didrik Heggdal, Synne Borgejordet, Roar Fosse
2022 Frontiers in Psychology  
They have been encountered at a specialized inpatient ward offering exposure-based therapy that aims at restoring self-regulation and recovery.  ...  These individuals have had long treatment histories in the mental health care system.  ...  ACKNOWLEDGMENTS The authors thank Torhild Fossbakken for work on the concept of existential catastrophe anxiety in an initial phase of the project.  ... 
doi:10.3389/fpsyg.2022.766149 pmid:35360621 pmcid:PMC8960201 fatcat:jzg2kmpknralfmarf74rzw7zfu

Understanding the Gap Between Information Models and Realism-Based Ontologies Using the Generic Component Model [chapter]

Mathias Brochhausen, Sarah J. Bost, Nitya Singh, Christoph Brochhausen, Bernd Blobel
2021 Studies in Health Technology and Informatics  
In this use-case oriented approach, we explore how a system-theoretic, architecture-centric, ontology-based methodology can help to better understand this gap.  ...  Based on the lack of computable semantics in frequently used Common Data Models, there appears to be a gap between knowledge representation requirements and these models.  ...  This problem also creates difficulties for approaches that seek to develop a knowledge representation resource (e.g. ontology-driven data management) based on an information model [4] .  ... 
doi:10.3233/shti210590 pmid:34734868 fatcat:7vkiax6gxre2nowl6mivjz32ge

Smoking-Related DNA Methylation is Differentially Associated with Cadmium Concentration in Blood

Jae-Eun Lee, Hye-Ryun Kim, Mee-hee Lee, Nam-Hee Kim, Kyoung-Min Wang, Sang-hyeop Lee, Ok Park, Eun-Jung Hong, Jong-Woo Youn, Young-Youl Kim
2020 Biochemical Genetics  
Smoking is a key source of cadmium exposure; however, there are limited studies examining DNA methylation alterations following smoking-related cadmium exposure.  ...  Furthermore, we showed that these four loci may be differentially methylated by cadmium exposure due to smoking.  ...  We randomly selected subjects based on sex, age, and self-reported smoking history.  ... 
doi:10.1007/s10528-020-09965-y pmid:32347401 fatcat:i4wklavf7bbl3dpw2ynrz5lw5q
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