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Extract of Two Letters from the Late Capt. Alexander Rose, of the 52d Regiment, to Dr. Murdoch, F. R. S

A. Rose
1770 Philosophical Transactions of the Royal Society of London  
Alexander Rofe, o f the 5 2 Regiment\to Dr* Murdoch, JF.,./?. S . From L e t t e r I. Madras, 20 Sept. 1768.  ...  °u thin § bey°nd the city he lived rv H p f MhC ha1 bee" tWdve y£ars in 'hat coun-.S ifln S r W . meL faT Vf r> ^ way of ^w i n g his ■miflionary zeal, that he had burnt three thousand man n-manufcripts  ... 
doi:10.1098/rstl.1770.0040 fatcat:7bancd3qzre3flrsbtlhwpmm24

Extract of Two Letters from the Late Capt. Alexander Rose, of the 52d Regiment, to Dr. Murdoch, F. R. S

Alexander Rose
1770 Philosophical Transactions  
Alexander RoSe, of the szd Regirsxt, zo IDr Murdoch?F. R. S Froxn LETTER I. Madras, zo Sept. I768.  ...  1770 S $ $ s X X W E arrinred here the I sth fetting out, we had bad weather, having been driven by a contrary wind upon the coaR of Portugal.  ...  Their fiupertor, who fieemed the-mo*-intelligent, could: give me no account of any place or thing beyond the city he lived in, aIthough he had been twelve year-s in that sountry.  ... 
fatcat:rxs7jctlsnhurhp4gl6ko7o4qe

Towards an efficient compression of 3D coordinates of macromolecular structures

Yana Valasatava, Anthony R. Bradley, Alexander S. Rose, Jose M. Duarte, Andreas Prlić, Peter W. Rose, Freddie Salsbury
2017 PLoS ONE  
bits, and a decompression algorithm that recovers S o from S c .  ...  The algorithm stores the first encoded value as an original coordinate, e.g. s 0 = c 0 . The second encoded value is s 1 = c 1 − c 0 .  ... 
doi:10.1371/journal.pone.0174846 pmid:28362865 pmcid:PMC5376293 fatcat:ybpifc725jaa3gqno2oonaz3zm

MMTF - an efficient file format for the transmission, visualization, and analysis of macromolecular structures [article]

Anthony R Bradley, Alexander S Rose, Antonin Pavelka, Yana Valasatava, Jose M Duarte, Andreas Prlic, Peter W Rose
2017 bioRxiv   pre-print
MMTF File Types 2 ed ed 67 re s.  ...  Data Categories described in MMTF format Data Category Data Items 1 Metadata PDB ID, title, deposition date, release date, experimental method(s) Crystallographic info Space group, unit cell, NCS operators  ... 
doi:10.1101/122689 fatcat:xht33wu2rrddlckxx5vav7izv4

A Rose by Any Other Name: Practical Updates on Microbial Nomenclature for Clinical Microbiology

Colleen S. Kraft, Alexander J. McAdam, Karen C. Carroll, Carey-Ann D. Burnham
2016 Journal of Clinical Microbiology  
doi:10.1128/jcm.02169-16 pmid:27807148 pmcid:PMC5228243 fatcat:rp75bfewuzeyvc2ckdzmeegx5q

Neutron Encoded Labeling for Peptide Identification

Christopher M. Rose, Anna E. Merrill, Derek J. Bailey, Alexander S. Hebert, Michael S. Westphall, Joshua J. Coon
2013 Analytical Chemistry  
A maximum of 500 precursors were dynamically excluded for 30 s with a window −0.55 Th and +2.55 Th surrounding the precursor.  ... 
doi:10.1021/ac400476w pmid:23638792 pmcid:PMC3827945 fatcat:3kvip7ucardq5ak55kdnko36oe

On the transition coordinate for protein folding

Rose Du, Vijay S. Pande, Alexander Yu. Grosberg, Toyoichi Tanaka, Eugene S. Shakhnovich
1998 Journal of Chemical Physics  
Each error bar gives the width of the distribution of t f 's and t u 's over the conformations at that p. veal the physical characteristics of the system.  ...  The energy of a conformation is given by E ϭ ͚ IϽJ B S I S J ⌬(r I Ϫr J ) where B i j is the interaction energy between species i and j, ⌬(r I Ϫr J )ϭ1 for nearest neighbor contacts ͑but not neighbors  ... 
doi:10.1063/1.475393 fatcat:rfnex36gxzdvpmr5oqnqkmtbwq

Real-time structural motif searching in proteins using an inverted index strategy [article]

Sebastian Bittrich, Stephen K. Burley, Alexander S. Rose
2020 bioRxiv   pre-print
Detection of such structural motifs can provide valuable insights into the function(s) of previously uncharacterized proteins.  ...  Table 1 [2] 3,498 0.92 s 0.72Å (1hcg) 1.86% aminopeptidase [3] 350 0.46 s N/A 0.00% zinc coordination [5] 1,056 0.13 s 0.42Å (2eou) 8.52% enolase superfamily [6] 288 0.36 s 0.89Å (3mkc) 2.33%  ...  enolase superfamily (exchanges) 308 0.87 s 0.89Å (3mkc) 5.62% RNA G-tetrad [7] 84 1.10 s 1.53Å (2rsk) 0.00% Each reported runtime represents the average over 10 benchmark runs.  ... 
doi:10.1101/2020.09.11.293977 fatcat:qzxwtcodinco5i4q4lfelt4tdm

Star Wars: The Force Awakens [the Western Pleasure Principle]

Alexander S Rose
2019 CINEJ Cinema Journal  
Indeed, how is it that the First Order rose from said ashes in the first place if the Republic reigned?  ...  Despite acknowledging BB8's personhood by admonishing a scavenger that has "no respect for anyone," Rey consistently refers to the droid's erstwhile companion as his "Master."  ... 
doi:10.5195/cinej.2019.216 fatcat:wsrriksxhrbobktlvtsxecbs2m

NGL Viewer: a web application for molecular visualization

Alexander S. Rose, Peter W. Hildebrand
2015 Nucleic Acids Research  
The NGL Viewer (http://proteinformatics.charite.de/ ngl) is a web application for the visualization of macromolecular structures. By fully adopting capabilities of modern web browsers, such as WebGL, for molecular graphics, the viewer can interactively display large molecular complexes and is also unaffected by the retirement of third-party plug-ins like Flash and Java Applets. Generally, the web application offers comprehensive molecular visualization through a graphical user interface so that
more » ... life scientists can easily access and profit from available structural data. It supports common structural fileformats (e.g. PDB, mmCIF) and a variety of molecular representations (e.g. 'cartoon, spacefill, licorice'). Moreover, the viewer can be embedded in other web sites to provide specialized visualizations of entries in structural databases or results of structure-related calculations.
doi:10.1093/nar/gkv402 pmid:25925569 pmcid:PMC4489237 fatcat:tkjacmsrabhcblzvhwndznml4i

Molecular Graphics: Bridging Structural Biologists and Computer Scientists

Xavier Martinez, Michael Krone, Naif Alharbi, Alexander S. Rose, Robert S. Laramee, Sean O'Donoghue, Marc Baaden, Matthieu Chavent
2019 Structure  
Johnson, S. Hertig, A guide to the visual analysis and communication of biomolecular structural data, Nature reviews.  ... 
doi:10.1016/j.str.2019.09.001 pmid:31564470 fatcat:nfm75f5ztrbibgpgnqivseczue

Abstract of a Journal of the Weather in Quebec, between the 1st of April 1765, and 30th of April 1766. By Cap. Alex. Rose, of the 52d Regiment; Communicated by the Rev. P. Murdoch, D. D. F. R. S

Alexander Rose, P. Murdoch
1766 Philosophical Transactions  
710) at uebec, at a place down the ritter, called Mont Louiss was a hearry Rorm of finow, which continued the whole day: tbe diilance of thefie places is about 260 mile8, Alexander RofeX Lieutenant in  ...  Oaremaflc the wnole dar; aftenzoon E 29 52 38 S. E. Sunffiiny day; afternoon S. W. 0&. I 56 47 S. W. Sunffiiny day 656 39W. Ditto 9 60 S3 S. E.  ... 
fatcat:3hyu7hz3arcwhco4euvu2gk2uy

Firefly luciferin-activated rose bengal: in vitro photodynamic therapy by intracellular chemiluminescence in transgenic NIH 3T3 cells

Theodossis Theodossiou, John S Hothersall, Elizabeth A Woods, Klaus Okkenhaug, Jake Jacobson, Alexander J MacRobert
2003 Cancer Research  
Here we show the in vitro photodynamic effect of rose bengal activated by intracellular generation of light, in luciferase-transfected NIH 3T3 murine fibroblasts.  ...  From the steady-state light emission, it was calculated that ϳ60 photons/cell/s were produced.  ...  At the same time, this also equates to the possible intracellular generation of 45 singlet oxygen molecules/cell/s.  ... 
pmid:12702568 fatcat:u2fszpdnuzccbjzcaxcd3cmttq

The next generation RCSB.org

Justin Flatt, Jose M. Duarte, Charmi Bhikadiya, Chunxiao Bi, Sebastian Bittrich, Li Chen, Shuchismita Dutta, Robert Lowe, Alexander S. Rose, Yana Rose, Joan Segura, John Westbrook (+1 others)
2021 Acta Crystallographica Section A: Foundations and Advances  
doi:10.1107/s0108767321097245 fatcat:a4cblmwfejdfvmtsdxkcvhnwve

MMTF—An efficient file format for the transmission, visualization, and analysis of macromolecular structures

Anthony R. Bradley, Alexander S. Rose, Antonín Pavelka, Yana Valasatava, Jose M. Duarte, Andreas Prlić, Peter W. Rose, Dina Schneidman
2017 PLoS Computational Biology  
OPEN ACCESS Citation: Bradley AR, Rose AS, Pavelka A, Valasatava Y, Duarte JM, Prlić A, et al. (2017) MMTF-An efficient file format for the transmission, visualization, and analysis of macromolecular structures  ...  compression tools to create a compressed MMTF file.https://doi.org/10.1371/journal.pcbi.1005575.g002 Data Category Data Items Metadata PDB ID, title, deposition date, release date, experimental method(s)  ... 
doi:10.1371/journal.pcbi.1005575 pmid:28574982 pmcid:PMC5473584 fatcat:niriuttkdnhcdp2l5mfc6vocdq
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