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APID database: redefining protein–protein interaction experimental evidences and binary interactomes

Diego Alonso-López, Francisco J Campos-Laborie, Miguel A Gutiérrez, Luke Lambourne, Michael A Calderwood, Marc Vidal, Javier De Las Rivas
2019 Database: The Journal of Biological Databases and Curation  
As a result of these redefinitions, APID provides unified protein interactomes including the specific 'experimental evidences' that support each PPI, indicating whether the interactions can be considered  ...  Thus, APID provides PPIs reported in published research articles (with traceable PMIDs) and detected by valid experimental interaction methods that give evidences about such protein interactions (following  ...  Figure 1 . 1 Presention of the new version of APID (Agile Protein Interactomes DataServer) that includes binary interactomes based in experimental evidences.  ... 
doi:10.1093/database/baz005 pmid:30715274 pmcid:PMC6354026 fatcat:jjpl4nnc2retpcta2syx6mamjq

TWIST1 and chromatin regulatory proteins interact to guide neural crest cell differentiation

Xiaochen Fan, V Pragathi Masamsetti, Jane Qj Sun, Kasper Engholm-Keller, Pierre Osteil, Joshua Studdert, Mark E Graham, Nicolas Fossat, Patrick Pl Tam
2021 eLife  
Protein interaction is critical molecular regulatory activity underlining cellular functions and precise cell fate choices.  ...  differentiation of NCCs and compromised craniofacial tissue patterning.  ...  APID database: redefining protein-protein 899 interaction experimental evidences and binary interactomes. Database (Oxford), 2019. 900 Assenov, Y., Ramírez, F., Schelhorn, S.-E.  ... 
doi:10.7554/elife.62873 pmid:33554859 pmcid:PMC7968925 fatcat:olwgsmfrprawldq7dosyung4du