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A unified approach for debugging is-a structure and mappings in networked taxonomies

Patrick Lambrix, Valentina Ivanova
2013 Journal of Biomedical Semantics  
Results: We propose a unified framework for debugging the is-a structure of and mappings between taxonomies, the most used kind of ontologies.  ...  We present theory and algorithms as well as an implemented system RepOSE, that supports a domain expert in detecting and repairing missing and wrong is-a relations and mappings.  ...  We thank Ulf Hammerling and Jonas Laurila Bergman from the Swedish National Food Agency for the cooperation on the experiments.  ... 
doi:10.1186/2041-1480-4-10 pmid:23548155 pmcid:PMC3851282 fatcat:7xq4zn5sozhalkrclmrufn27cu

A Unified Approach for Aligning Taxonomies and Debugging Taxonomies and Their Alignments [chapter]

Valentina Ivanova, Patrick Lambrix
2013 Lecture Notes in Computer Science  
In this paper we present a unified framework for aligning taxonomies, the most used kind of ontologies, and debugging taxonomies and their alignments, where ontology alignment is treated as a special kind  ...  Our framework supports the detection and repairing of missing and wrong is-a structure in taxonomies, as well as the detection and repairing of missing (alignment) and wrong mappings between ontologies  ...  We thank the Swedish Research Council (Vetenskapsrådet) and the Swedish e-Science Research Centre (SeRC) for financial support.  ... 
doi:10.1007/978-3-642-38288-8_1 fatcat:s4aae7qt3jbrtgvhpb36xoudvq

A System for Aligning Taxonomies and Debugging Taxonomies and Their Alignments [chapter]

Valentina Ivanova, Patrick Lambrix
2013 Lecture Notes in Computer Science  
In this demonstration paper we present a system for aligning taxonomies, the most used kind of ontologies, and debugging taxonomies and their alignments, where ontology alignment is treated as a special  ...  A key step towards achieving high quality ontologies and mappings is discovering and resolving modeling defects, e.g., wrong or missing relations and mappings.  ...  We thank the Swedish Research Council (Vetenskapsrådet) and the Swedish e-Science Research Centre (SeRC) for financial support.  ... 
doi:10.1007/978-3-642-41242-4_15 fatcat:wety73qo7jhljbsjr3u2zw7yrq


1996 Series on Software Engineering and Knowledge Engineering  
The information is presented in a form designed to enhance both the understanding and productivity of the programmer through the e cient use of the human visual system.  ...  However, depending on the programming paradigms and architectural platforms utilized, the variety and manner in which information is best presented varies.  ...  In order to be able to understand more of program visualisation, and provide a structured framework, a general taxonomy is provided.  ... 
doi:10.1142/9789812797995_0001 fatcat:me3ldaq3xvawfdegpqdgzil5te

Debugging the missing is-a structure within taxonomies networked by partial reference alignments

Patrick Lambrix, Qiang Liu
2013 Data & Knowledge Engineering  
In particular, we debug the missing structural relations (is-a hierarchy) in a fundamental kind of ontologies, i.e. taxonomies.  ...  We use the ontology network as domain knowledge to detect the missing is-a relations in these ontologies.  ...  Availability The system described in this paper is available for download at∼patla/research/RepOSE/.  ... 
doi:10.1016/j.datak.2013.03.003 fatcat:2myjt43imncmbhf45wlsi42uxe

Completing and Debugging Ontologies: state of the art and challenges [article]

Patrick Lambrix
2020 arXiv   pre-print
A key step is ontology debugging and completion. In general, there are two steps: detecting defects and repairing defects. In this paper we discuss the state of the art regarding the repairing step.  ...  As semantically-enabled applications require high-quality ontologies, developing and maintaining ontologies that are as correct and complete as possible is an important although difficult task in ontology  ...  Acknowledgements We thank the anonymous referees for comments that have led to improvements of the paper as well as Mina Abd Nikooie Pour, Ying Li and Chunyan Wang for proofreading and checking the examples  ... 
arXiv:1908.03171v2 fatcat:mztcxefbqndebd6cvj5wgz2de4

Interpretable Machine Learning: Moving From Mythos to Diagnostics [article]

Valerie Chen, Jeffrey Li, Joon Sik Kim, Gregory Plumb, Ameet Talwalkar
2021 arXiv   pre-print
In this work, we synthesize foundational work on IML methods and evaluation into an actionable taxonomy.  ...  Eventually, by building on the results generated from this workflow, a more complete version of the taxonomy will increasingly allow consumers to find relevant methods for their target use cases and researchers  ...  The taxonomy (as shown at an abstract level in Figure 2 and discussed in more depth in Section 3) not only serves as a template for building an explicit mapping between potential IML diagnostics and  ... 
arXiv:2103.06254v2 fatcat:now6fiuopvhzfaukf3if3d4oxa

Ontology Management [chapter]

Stephan Bloehdorn, Peter Haase, Zhisheng Huang, York Sure, Johanna Völker, Frank van Harmelen, Rudi Studer
2009 Semantic Knowledge Management  
Key component functionalities of an ontology management system are discussed, including ontology mapping, ontology learning, debugging reasoning with inconsistent ontologies, and (structured and unstructured  ...  We are now entering a phase of knowledge system development, in which ontologies are produced in larger numbers and exhibit greater complexity than before.  ...  mapping formalism and using the mappings for a given integration task.  ... 
doi:10.1007/978-3-540-88845-1_2 fatcat:jer6vbksjbgspcqvl2wgahsuy4

A Platform-Based Taxonomy for ESL Design

D. Densmore, R. Passerone
2006 IEEE Design & Test of Computers  
For example, in 2005 growth was only 0.6%, 1 and in 2006 it is predicted to be less than 3%. 2 The reasons are varied and are beyond the scope of this article.  ...  (See the "Trends affecting the ESL design market" sidebar for a brief history and explanation of how various market factors have contributed to developments in ESL design.)  ...  Acknowledgments We thank the following for their support in reviewing this article and in helping to classify the various ESL approaches.  ... 
doi:10.1109/mdt.2006.112 fatcat:ntbfmidg5fd4vdjr3yslee2s2y

Deriving a unified fault taxonomy for event-based systems

Waldemar Hummer, Christian Inzinger, Philipp Leitner, Benjamin Satzger, Schahram Dustdar
2012 Proceedings of the 6th ACM International Conference on Distributed Event-Based Systems - DEBS '12  
In this paper we take a step forward and study potential origins and effects of faults in such systems. Our work on a unified fault taxonomy follows a rigorous methodology.  ...  The domain model provides a holistic view and covers both structural and procedural aspects of event-based systems.  ...  In this paper we take a step ahead in this direction and present a unified fault taxonomy based on a common model for event-based systems.  ... 
doi:10.1145/2335484.2335504 dblp:conf/debs/HummerILSD12 fatcat:fgia42irqberhi64xcwtrd2wyu

Utilizing Hierarchical Multiprocessing for Medical Image Registration

William Plishker, Omkar Dandekar, Shuvra Bhattacharyya, Raj Shekhar
2010 IEEE Signal Processing Magazine  
COMPUTE-ENABLED MEDICINE For the past decade, improving performance and accuracy has been a driving force of innovation in automated medical image registration.  ...  dvances in medical imaging technologies have enabled medical diagnoses and procedures that were simply not possible a decade ago.  ...  To facilitate a design process in which the structure of an application is considered when mapping to these diverse programming models, we leverage a novel framework based on an image registration specific  ... 
doi:10.1109/msp.2009.935419 fatcat:3j63mqfj7za27engn2pokpcwgq

Cyber Threat Intelligence Model: An Evaluation of Taxonomies, Sharing Standards, and Ontologies within Cyber Threat Intelligence

Vasileios Mavroeidis, Siri Bromander
2017 2017 European Intelligence and Security Informatics Conference (EISIC)  
This purpose is served by the use of taxonomies, sharing standards, and ontologies.  ...  In addition, we use our model to analyze and evaluate several existing taxonomies, sharing standards, and ontologies relevant to cyber threat intelligence.  ...  and automatically map them into a fully linked semantic graph accessible in real time.  ... 
doi:10.1109/eisic.2017.20 dblp:conf/eisic/MavroeidisB17 fatcat:rvhnodachjf33gmosmpuytbspq

Using Active Objects for Structuring Service Oriented Architectures. Anthropomorphic Programming with Actors

Dave Thomas, Brian Barry
2004 Journal of Object Technology  
Define their behavior In Actra, we add structure by providing a taxonomy for Actors and introducing OO inheritance.  ...  The anthropomorphic approach seems to be very natural. Actor taxonomy is a dense encoding of knowledge.  ...  Brian has over 20 years of experience in the design and implementation of object-oriented and component-based systems, including distributed, client/server, embedded and real-time applications.  ... 
doi:10.5381/jot.2004.3.7.c1 fatcat:5tr2zbd26vhtnnsjjb6soq742m


Arun Kumar, Feng Niu, Christopher Ré
2013 Communications of the ACM  
Acknowledgments The Hazy Research Group is a team of Ph.D., M.S., and undergraduate students, working under the supervision of Christopher Ré.  ...  We appreciate the support of the Center for High Throughput Computing and Miron Livny's Condor research group.  ...  Bismarck: A unified Architecture for in-RDBMs Analytics The Bismarck project 10 is the first step in devising common infrastructure abstractions.  ... 
doi:10.1145/2428556.2428570 fatcat:nvl7nqinpjbybg457uorkasu7e

Developing a computer science-specific learning taxonomy

Ursula Fuller, Charles Riedesel, Errol Thompson, Colin G. Johnson, Tuukka Ahoniemi, Diana Cukierman, Isidoro Hernán-Losada, Jana Jackova, Essi Lahtinen, Tracy L. Lewis, Donna McGee Thompson
2007 ACM SIGCSE Bulletin  
This paper reviews the literature on educational taxonomies and their use in computer science education, identifies some of the problems that arise, proposes a new taxonomy and discusses how this can be  ...  Bloom's taxonomy of the cognitive domain and the SOLO taxonomy are being increasingly widely used in the design and assessment of courses, but there are some drawbacks to their use in computer science.  ...  Acknowledgements This paper is partly supported by the ITiCSE 2007 Student Bursary of the British Computer Society and the grant of FGU No 21/2007 (Faculty of Management Science and Informatics, University  ... 
doi:10.1145/1345375.1345438 fatcat:j4jvlhefuvhlhm5gjaumdngge4
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