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A Computational Framework for Proteome-Wide Pursuit and Prediction of Metalloproteins using ICP-MS and MS/MS Data
2011
BMC Bioinformatics
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We recently developed a generally-applicable experimental technique for finding metalloproteins on a genome-wide scale. ...
Applying this metal-directed protein purification approach (ICP-MS and MS/MS based) to the prototypical microbe Pyrococcus furiosus conclusively demonstrated the extent and diversity of the uncharacterized ...
The GMPA analysis in particular was used to provide estimates of the numbers of metalloproteins that could be expected proteome-wide and a narrowed list of candidates (based on ICP-MS and MS/MS data) at ...
doi:10.1186/1471-2105-12-64
pmid:21356119
pmcid:PMC3058030
fatcat:bq5tmfealvd6lczh6n26ukvbxu
SPECIAL ISSUE ON BIOPHYSICS IN INDIA GUEST EDITORS
unpublished
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A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2018; you can also visit the original URL.
The file type is application/pdf.
It has been argued and accepted that proteome analysis offers a new approach for identification of wide spectrum of genes that are expressed in living system. ...
Here we present a method for correcting PacBio reads, which iteratively targets errors using short reads, and can be adapted to suit existing data and computational resources. ...
Analysis of proteomic data of N. gonorrhoeae showed that ~43% of the proteome are listed as hypothetical protein (HP), for which functions are not known. ...
fatcat:7gngicns5nfltnba2jqucgci2y