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3D Non-rigid Motion Correction of Free-Breathing Abdominal DCE-MRI Data [chapter]

Zhang Li, Matthan W. A. Caan, Manon L. Ziech, Japp Stoker, Lucas J. van Vliet, Frans M. Vos
2012 Lecture Notes in Computer Science  
We propose a gated, 3D non-rigid motion correction method that robustly extracts time intensity curves from bowel segments in free-breathing abdominal DCE-MRI data.  ...  However, respiratory and peristaltic motions complicate an easy analysis of such curves since spatial correspondence over time is lost.  ...  We propose a 3D non-rigid motion correction method that robustly extracts time intensity curves from bowel segments in free-breathing abdominal DCE-MRI data.  ... 
doi:10.1007/978-3-642-28557-8_6 fatcat:wyyow4ekozh7hppowepzdwngyi

Free breathing DCE-MRI with motion correction and its values for benign and malignant liver tumor differentiation

Xiaolin Zheng, Lihua Xiao, Xianmiao Fan, Ning Huang, Zihua Su, Xiao Xu
2015 Radiology of Infectious Diseases  
Pharmacokinetics analysis could be performed with the help of motion correction by non-rigid registration using the first pass data.  ...  Automatic non-linear image registration was applied to both multi-flip angle data and dynamic phase data for motion correction.  ...  Conclusions We proposed a liver DCE-MRI technique with free breathing and motion correction.  ... 
doi:10.1016/j.jrid.2015.07.001 fatcat:ml7zcmnvtfgl3pw3vw6wktkoem

Fast pediatric 3D free-breathing abdominal dynamic contrast enhanced MRI with high spatiotemporal resolution

Tao Zhang, Joseph Y. Cheng, Aaron G. Potnick, Richard A. Barth, Marcus T. Alley, Martin Uecker, Michael Lustig, John M. Pauly, Shreyas S. Vasanawala
2013 Journal of Magnetic Resonance Imaging  
Purpose-To develop a method for fast pediatric 3D free-breathing abdominal dynamic contrast enhanced (DCE) MRI and investigate its clinical feasibility.  ...  Undersampled data were reconstructed with a compressed sensing method without motion correction (FB-CS) and the proposed method (FB-LR).  ...  DISCUSSION This study addresses the salient challenges of fast free-breathing 3D DCE pediatric MRI.  ... 
doi:10.1002/jmri.24551 pmid:24375859 pmcid:PMC4065644 fatcat:44s3w7lpdrd2tbpzljs7j2umgm

Motion correction of free-breathing magnetic resonance renography using model-driven registration

Dimitra Flouri, Daniel Lesnic, Constantina Chrysochou, Jehill Parikh, Peter Thelwall, Neil Sheerin, Philip A Kalra, David L Buckley, Steven P Sourbron
2021 Magnetic Resonance Materials in Physics, Biology and Medicine  
In this study, we investigate whether MDR can effectively correct the motion in free-breathing MR renography (MRR).  ...  DRO data showed that the bias and precision of parameter maps after MDR are indistinguishable from motion-free data.  ...  Time series after motion correction with frame indices: a DRO data with rigid motion; b DRO data with non-rigid motion; c 2D MRR data of subject 3; d 3D MRR data of subject 1 Fig. 6 Fig. 7 67 Effects  ... 
doi:10.1007/s10334-021-00936-x pmid:34160718 pmcid:PMC8578117 fatcat:h4kemloclvfaxddvet6jdzvqpq

Image registration in dynamic renal MRI—current status and prospects

Frank G. Zöllner, Amira Šerifović-Trbalić, Gordian Kabelitz, Marek Kociński, Andrzej Materka, Peter Rogelj
2019 Magnetic Resonance Materials in Physics, Biology and Medicine  
Therefore, they are hampered by motion, e.g., by pulsation, peristaltic, or breathing motion.  ...  This comprises among others assessment of hemodynamic parameters by arterial spin labeling (ASL) or dynamic contrast-enhanced (DCE-) MRI.  ...  Table 1 1 Overview of image acquisition-based motion correction techniques used in renal MRI Motion correction approach Application References Breathhold strategies Shallow regular breathing ASL, DCE-MRI  ... 
doi:10.1007/s10334-019-00782-y pmid:31598799 fatcat:vmbq3ehs55gctf3mmdxh4xppzu

XD-GRASP: Golden-angle radial MRI with reconstruction of extra motion-state dimensions using compressed sensing

Li Feng, Leon Axel, Hersh Chandarana, Kai Tobias Block, Daniel K. Sodickson, Ricardo Otazo
2015 Magnetic Resonance in Medicine  
The performance of XD-GRASP is demonstrated for free-breathing threedimensional (3D) abdominal imaging, two-dimensional (2D) cardiac cine imaging and 3D dynamic contrast-enhanced (DCE) MRI of the liver  ...  Purpose-To develop a novel framework for free-breathing MRI called XD-GRASP, which sorts dynamic data into extra motion-state dimensions using the self-navigation properties of radial imaging and reconstructs  ...  Jing Liu from UCSF for helpful discussion about motion estimations and Mr. Jian Xu from Siemens Healthcare USA for radial bSSFP sequence support.  ... 
doi:10.1002/mrm.25665 pmid:25809847 pmcid:PMC4583338 fatcat:ql6fapvulraynpdpm3owmdtday

Respiratory motion-compensated radial dynamic contrast-enhanced (DCE)-MRI of chest and abdominal lesions

Wei Lin, Junyu Guo, Mark A. Rosen, Hee Kwon Song
2008 Magnetic Resonance in Medicine  
) is corrected using 3D image correlation.  ...  In chest and abdominal regions, however, respiratory motion can seriously degrade the achievable image quality in DCE-MRI studies.  ...  the free-breathing DCE-MRI scan.  ... 
doi:10.1002/mrm.21740 pmid:18956465 pmcid:PMC4772667 fatcat:ewdgykbpujel3nkiumd3rruuby

Assessment of 3D DCE-MRI of the kidneys using non-rigid image registration and segmentation of voxel time courses

Frank G. Zöllner, Rosario Sance, Peter Rogelj, María J. Ledesma-Carbayo, Jarle Rørvik, Andrés Santos, Arvid Lundervold
2009 Computerized Medical Imaging and Graphics  
The proposed registration method reduced motion artifacts in the image time series and improved further analysis of the DCE-MRI data.  ...  This approach consists of non-rigid 3D image registration of the moving kidney followed by k-means clustering of the voxel time courses with split between left and right kidney.  ...  The total acquisition time in exam 1 was 7 min 12 s with pauses of 62 s after volume 11, 70 s after volume number 16, and Non-rigid image registration The registration of abdominal DCE-MRI time series  ... 
doi:10.1016/j.compmedimag.2008.11.004 pmid:19135861 fatcat:ii7mfqssczfzlin3zlqo3fzps4

Automated registration of sequential breath-hold dynamic contrast-enhanced MR images: a comparison of three techniques

Sivaramakrishnan Rajaraman, Jeffrey J. Rodriguez, Christian Graff, Maria I. Altbach, Tomislav Dragovich, Claude B. Sirlin, Ronald L. Korn, Natarajan Raghunand
2011 Magnetic Resonance Imaging  
resolution vis-à-vis free-breathing.  ...  DCE-MRI of chest and abdominal lesions is typically performed during sequential breath-holds, which introduces misregistration due to inconsistent diaphragm positions, and also places constraints on temporal  ...  Acknowledgments This work was partly funded by grants from the National Institutes of Health (P01-CA017094 and the IRAT supplement to P30-CA023074).  ... 
doi:10.1016/j.mri.2011.02.012 pmid:21531108 pmcid:PMC3100446 fatcat:kadb5u72ubd7xaoovhexskv4ei

Rigid-body motion correction of the liver in image reconstruction for golden-angle stack-of-stars DCE MRI

Adam Johansson, James Balter, Yue Cao
2017 Magnetic Resonance in Medicine  
To counteract the effects of motion, liver DCE-MRI has been acquired during repeated breath holding (5) .  ...  Finally, the corrected data is reconstructed into DCE-MRI time series using temporal view sharing.  ... 
doi:10.1002/mrm.26782 pmid:28617993 fatcat:3t4umsepabdntfsbqys4ccgi5a

Compressed sensing for body MRI

Li Feng, Thomas Benkert, Kai Tobias Block, Daniel K. Sodickson, Ricardo Otazo, Hersh Chandarana
2016 Journal of Magnetic Resonance Imaging  
The advent of compressed sensing marks the prelude to a new era of rapid MRI, where the focus of data acquisition has changed from sampling based on the nominal number of voxels and/or frames to sampling  ...  This paper presents a brief overview of the application of compressed sensing techniques in body MRI, where imaging speed is crucial due to the presence of respiratory motion along with stringent constraints  ...  These studies include accelerated 3D abdominal MRI, free-breathing DCE-MRI, abdominal 4D flow imaging.  ... 
doi:10.1002/jmri.25547 pmid:27981664 pmcid:PMC5352490 fatcat:ulfop3kccrg4tdpqsybotylccy

Method for motion artifact reduction using a convolutional neural network for dynamic contrast enhanced MRI of the liver [article]

Daiki Tamada, Marie-Luise Kromrey, Hiroshi Onishi, Utaroh Motosugi
2018 arXiv   pre-print
Purpose: To improve the quality of images obtained via dynamic contrast-enhanced MRI (DCE-MRI) that include motion artifacts and blurring using a deep learning approach.  ...  Methods: A multi-channel convolutional neural network (MARC) based method is proposed for reducing the motion artifacts and blurring caused by respiratory motion in images obtained via DCE-MRI of the liver  ...  Other approaches include data acquisition without breath holding (free-breathing method) using respiratory triggering and respiratory triggered DCE-MRI, which is an effective technique to reduce motion  ... 
arXiv:1807.06956v2 fatcat:zxv35dke3zd7fdobe3r3x23g5y

Intravoxel incoherent motion diffusion-weighted imaging of hepatocellular carcinoma: Is there a correlation with flow and perfusion metrics obtained with dynamic contrast-enhanced MRI?

Stefanie J. Hectors, Mathilde Wagner, Cecilia Besa, Octavia Bane, Hadrien A. Dyvorne, M. Isabel Fiel, Hongfa Zhu, Michael Donovan, Bachir Taouli
2016 Journal of Magnetic Resonance Imaging  
Materials and Methods-Twenty-five patients with HCC (M/F 23/2, mean age 58 years) underwent abdominal MRI at 1.5 or 3.0T, including IVIM-DWI (with 16 b-values) and DCE-MRI (3D FLASH sequence, mean temporal  ...  Purpose-To assess the correlation between intravoxel incoherent motion diffusion-weighted imaging (IVIM-DWI) and dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) metrics in hepatocellular  ...  Sigmund from New York University School of Medicine for useful discussions.  ... 
doi:10.1002/jmri.25194 pmid:26919327 pmcid:PMC5142524 fatcat:wkaiccgstjcchffck7mklthviq

Motion Artifact Reduction Using a Convolutional Neural Network for Dynamic Contrast Enhanced MR Imaging of the Liver

Daiki Tamada, Marie-Luise Kromrey, Shintaro Ichikawa, Hiroshi Onishi, Utaroh Motosugi
2019 Magnetic Resonance in Medical Sciences  
To improve the quality of images obtained via dynamic contrast enhanced MRI (DCE-MRI), which contain motion artifacts and blurring using a deep learning approach.  ...  A deep learning-based method for removing motion artifacts in images obtained via DCE-MRI of the liver was demonstrated and validated.  ...  Other authors declare no conflict of interest to disclose related to this study.  ... 
doi:10.2463/ pmid:31061259 pmcid:PMC7067907 fatcat:dldkzf2ojrcj3engo2gaxsi2am

A method for dynamic subtraction MR imaging of the liver

Luca T Mainardi, Katia M Passera, Agnese Lucesoli, Paolo Potepan, Ernesto Setti, Renato Musumeci
2006 BMC Medical Imaging  
Acknowledgements The authors thank the staff of MR Unit of National Cancer Institute of Milan for technical assistance in the acquisition of patient data.  ...  In DCE-MRI, the liver is imaged during breath-hold (reducing respiratory motion artifacts) before and after the injection of contrast in selected phases of contrast distribution (typically early and late  ...  Contrast-Enhanced 3D Magnetic Resonance Imaging (DCE-MRI) detects and accurately characterizes many types of liver lesion [1]- [5] .  ... 
doi:10.1186/1471-2342-6-5 pmid:16759378 pmcid:PMC1564010 fatcat:itnjign7vfcn3irqp2ao5zmtuu
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